Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is cotJC [H]
Identifier: 220933137
GI number: 220933137
Start: 2517491
End: 2518072
Strand: Direct
Name: cotJC [H]
Synonym: Hore_23050
Alternate gene names: 220933137
Gene position: 2517491-2518072 (Clockwise)
Preceding gene: 220933136
Following gene: 220933138
Centisome position: 97.65
GC content: 47.77
Gene sequence:
>582_bases ATGTGGACTTATAAAAAAATACTCCAATACCCGGCCAATATCCGGAGAAAGGACCCCGAATTCGCCAGTCTGGTTATAAC CCAGTTCGGTGGACCCGATGGAGAATTATCTGCCGGTGTAAGATATCTCTCCCAGATGTATACCATGCCTTTCCCGGAAG GGAAAGCTATTTTAAACAGTATTGGAACTGAAGAACTGGCCCACTGGGAGATAATCGGAACCCTGGTTTACAAACTCGTT AAGGATGTTCCCCCTCAGGTCCTGCGGGAAGCAGGTTTTGGTGCCCACTATGCCCAGCACGGTCGGGCCAACTATCCCAG TGATGCAGCTGGTGTCCCCTGGACTGCTGCCTTTATACAGTCTCATGAAGATCCGGTAGCCAGCCTCCATGAAGACCTGG CTGCTGAAGAAAAAGCCCGGGCTACCTATGAATATCTTATTGACATGACCAATGATCCTGCTATTATAGATACCCTGTCA TTTTTGAGAATGAGAGAGGTAGTCCATTTCCAGAGGTTCGGGGAAGCTCTGGATCTTTTATATGACTATATGGAAGACCA CCACGACGAATACGAATTTTGA
Upstream 100 bases:
>100_bases ACTTTACGCAGCCTACCCCATGGCTGATTACCCCTGGGCCTATATCGATGAACCCTGGCCCTGGCAGATTAATTATTAAT TGAAAGGAGGAATTTAATAT
Downstream 100 bases:
>100_bases ATAAATTATAAAATTTTTTAAAGGGTTAATGTGTTTACTCTGGACTAATTCCTTAATAAATAATTTACTTTTACAGAATG ACCGGTTATATTTTATTAAA
Product: manganese containing catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MWTYKKILQYPANIRRKDPEFASLVITQFGGPDGELSAGVRYLSQMYTMPFPEGKAILNSIGTEELAHWEIIGTLVYKLV KDVPPQVLREAGFGAHYAQHGRANYPSDAAGVPWTAAFIQSHEDPVASLHEDLAAEEKARATYEYLIDMTNDPAIIDTLS FLRMREVVHFQRFGEALDLLYDYMEDHHDEYEF
Sequences:
>Translated_193_residues MWTYKKILQYPANIRRKDPEFASLVITQFGGPDGELSAGVRYLSQMYTMPFPEGKAILNSIGTEELAHWEIIGTLVYKLV KDVPPQVLREAGFGAHYAQHGRANYPSDAAGVPWTAAFIQSHEDPVASLHEDLAAEEKARATYEYLIDMTNDPAIIDTLS FLRMREVVHFQRFGEALDLLYDYMEDHHDEYEF >Mature_193_residues MWTYKKILQYPANIRRKDPEFASLVITQFGGPDGELSAGVRYLSQMYTMPFPEGKAILNSIGTEELAHWEIIGTLVYKLV KDVPPQVLREAGFGAHYAQHGRANYPSDAAGVPWTAAFIQSHEDPVASLHEDLAAEEKARATYEYLIDMTNDPAIIDTLS FLRMREVVHFQRFGEALDLLYDYMEDHHDEYEF
Specific function: The cotJ operon proteins affect spore coat composition. They are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat [H]
COG id: COG3546
COG function: function code P; Mn-containing catalase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the manganese catalase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007760 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05067 Mn_catalase [H]
EC number: NA
Molecular weight: Translated: 22032; Mature: 22032
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTYKKILQYPANIRRKDPEFASLVITQFGGPDGELSAGVRYLSQMYTMPFPEGKAILNS CCCHHHHHHCCHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH IGTEELAHWEIIGTLVYKLVKDVPPQVLREAGFGAHYAQHGRANYPSDAAGVPWTAAFIQ HCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHH SHEDPVASLHEDLAAEEKARATYEYLIDMTNDPAIIDTLSFLRMREVVHFQRFGEALDLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YDYMEDHHDEYEF HHHHHHHCCCCCC >Mature Secondary Structure MWTYKKILQYPANIRRKDPEFASLVITQFGGPDGELSAGVRYLSQMYTMPFPEGKAILNS CCCHHHHHHCCHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH IGTEELAHWEIIGTLVYKLVKDVPPQVLREAGFGAHYAQHGRANYPSDAAGVPWTAAFIQ HCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHH SHEDPVASLHEDLAAEEKARATYEYLIDMTNDPAIIDTLSFLRMREVVHFQRFGEALDLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YDYMEDHHDEYEF HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7768848; 9384377 [H]