Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is cotJC [H]

Identifier: 220933137

GI number: 220933137

Start: 2517491

End: 2518072

Strand: Direct

Name: cotJC [H]

Synonym: Hore_23050

Alternate gene names: 220933137

Gene position: 2517491-2518072 (Clockwise)

Preceding gene: 220933136

Following gene: 220933138

Centisome position: 97.65

GC content: 47.77

Gene sequence:

>582_bases
ATGTGGACTTATAAAAAAATACTCCAATACCCGGCCAATATCCGGAGAAAGGACCCCGAATTCGCCAGTCTGGTTATAAC
CCAGTTCGGTGGACCCGATGGAGAATTATCTGCCGGTGTAAGATATCTCTCCCAGATGTATACCATGCCTTTCCCGGAAG
GGAAAGCTATTTTAAACAGTATTGGAACTGAAGAACTGGCCCACTGGGAGATAATCGGAACCCTGGTTTACAAACTCGTT
AAGGATGTTCCCCCTCAGGTCCTGCGGGAAGCAGGTTTTGGTGCCCACTATGCCCAGCACGGTCGGGCCAACTATCCCAG
TGATGCAGCTGGTGTCCCCTGGACTGCTGCCTTTATACAGTCTCATGAAGATCCGGTAGCCAGCCTCCATGAAGACCTGG
CTGCTGAAGAAAAAGCCCGGGCTACCTATGAATATCTTATTGACATGACCAATGATCCTGCTATTATAGATACCCTGTCA
TTTTTGAGAATGAGAGAGGTAGTCCATTTCCAGAGGTTCGGGGAAGCTCTGGATCTTTTATATGACTATATGGAAGACCA
CCACGACGAATACGAATTTTGA

Upstream 100 bases:

>100_bases
ACTTTACGCAGCCTACCCCATGGCTGATTACCCCTGGGCCTATATCGATGAACCCTGGCCCTGGCAGATTAATTATTAAT
TGAAAGGAGGAATTTAATAT

Downstream 100 bases:

>100_bases
ATAAATTATAAAATTTTTTAAAGGGTTAATGTGTTTACTCTGGACTAATTCCTTAATAAATAATTTACTTTTACAGAATG
ACCGGTTATATTTTATTAAA

Product: manganese containing catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MWTYKKILQYPANIRRKDPEFASLVITQFGGPDGELSAGVRYLSQMYTMPFPEGKAILNSIGTEELAHWEIIGTLVYKLV
KDVPPQVLREAGFGAHYAQHGRANYPSDAAGVPWTAAFIQSHEDPVASLHEDLAAEEKARATYEYLIDMTNDPAIIDTLS
FLRMREVVHFQRFGEALDLLYDYMEDHHDEYEF

Sequences:

>Translated_193_residues
MWTYKKILQYPANIRRKDPEFASLVITQFGGPDGELSAGVRYLSQMYTMPFPEGKAILNSIGTEELAHWEIIGTLVYKLV
KDVPPQVLREAGFGAHYAQHGRANYPSDAAGVPWTAAFIQSHEDPVASLHEDLAAEEKARATYEYLIDMTNDPAIIDTLS
FLRMREVVHFQRFGEALDLLYDYMEDHHDEYEF
>Mature_193_residues
MWTYKKILQYPANIRRKDPEFASLVITQFGGPDGELSAGVRYLSQMYTMPFPEGKAILNSIGTEELAHWEIIGTLVYKLV
KDVPPQVLREAGFGAHYAQHGRANYPSDAAGVPWTAAFIQSHEDPVASLHEDLAAEEKARATYEYLIDMTNDPAIIDTLS
FLRMREVVHFQRFGEALDLLYDYMEDHHDEYEF

Specific function: The cotJ operon proteins affect spore coat composition. They are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat [H]

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05067 Mn_catalase [H]

EC number: NA

Molecular weight: Translated: 22032; Mature: 22032

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTYKKILQYPANIRRKDPEFASLVITQFGGPDGELSAGVRYLSQMYTMPFPEGKAILNS
CCCHHHHHHCCHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
IGTEELAHWEIIGTLVYKLVKDVPPQVLREAGFGAHYAQHGRANYPSDAAGVPWTAAFIQ
HCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHH
SHEDPVASLHEDLAAEEKARATYEYLIDMTNDPAIIDTLSFLRMREVVHFQRFGEALDLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDYMEDHHDEYEF
HHHHHHHCCCCCC
>Mature Secondary Structure
MWTYKKILQYPANIRRKDPEFASLVITQFGGPDGELSAGVRYLSQMYTMPFPEGKAILNS
CCCHHHHHHCCHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
IGTEELAHWEIIGTLVYKLVKDVPPQVLREAGFGAHYAQHGRANYPSDAAGVPWTAAFIQ
HCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHH
SHEDPVASLHEDLAAEEKARATYEYLIDMTNDPAIIDTLSFLRMREVVHFQRFGEALDLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDYMEDHHDEYEF
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768848; 9384377 [H]