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The map label for this gene is gfcE [H]

Identifier: 220933053

GI number: 220933053

Start: 2421117

End: 2422004

Strand: Direct

Name: gfcE [H]

Synonym: Hore_22210

Alternate gene names: 220933053

Gene position: 2421117-2422004 (Clockwise)

Preceding gene: 220933052

Following gene: 220933054

Centisome position: 93.91

GC content: 35.7

Gene sequence:

>888_bases
ATGGGAAGAGAACACAATCATTTAATATATATTGTCCTGGTTATACTATTTTTAACCCTGTTAATAACAGGTCCAGTCCT
GGCCTCCTATACCATTAAAGAAGGCGATACTGTTGAAATTTCAGTATGGGGACATAATGACCTTAGGAAAGTTATAACTG
TTCCTCCTGGAGGAATTATATATTTCCCCCTTATTAAGAAAATTAAAATAAGTGATAAAGAAGTAGATTTATTAGCAAAC
GAATTTGAAAATAAATTATCCAGATATATAAAAAATCCCATGGTAATTATTAATGTAATTAAAACCAAAAAATTGACAGC
TACTATATCAGGAAGTGTTAATACCAGGGGAATTCTTAAATTTGATAAACCCCTCTCCCTCCAGGAGGTTTTTAGCAGGG
CCGGAGGTTTTACACCAGAGGCTGATCTTTCCAGTATTATAATAAATACTACGGAAGGCAAGAGGGTCTTAAACCTTATT
GAAAATCCCTATCTGGCAACTACCTTTAAAATAAAGGATCATTATTCTATTTATATCCCTTCCAAAACCAGACTGATTAC
CGTAATGGGACAGGTAAAAAAACCCGGGTCTTTTCCCTATAAACCGGATATAAGGTTATTCGATGCCCTGGCCAGAGCCG
GTTTTATAACAGACCGGGCCGACCTGACCCAGATTGTAATTAACAGGGATTCACCCCATAAAAAGAAATTAAAAATTAAA
ATTGACAGAGCAGACTTATATAATTTAAATATTGATGATACCAGTAACCCGGTACTCAAGCCCGGTGATATAATATATAT
ACCTGAAAAACCATACCCGGATTTTGAACACCTGCTATCCCTTATACCCTTCTTAAATTCCCTGAAGAATCTGTTGGGTG
TGAACTAA

Upstream 100 bases:

>100_bases
CGAATCACCCGGTTATAACTATTTTTGGGCTTTTTTCTGTGACCCAGGTCACATTAACCCCTAGCATTTTCAAGATATAA
TGGAAGCAGGTGACAAATTT

Downstream 100 bases:

>100_bases
TATGGATAATATACCCCATAATTATGAGTATGAGATTGATCTCACTGAATACCTCGGAATTTTAAATAAAAGAAAATGGC
TGATACTGGCTATAACTATC

Product: polysaccharide export protein

Products: NA

Alternate protein names: Group 4 capsule protein E homolog [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MGREHNHLIYIVLVILFLTLLITGPVLASYTIKEGDTVEISVWGHNDLRKVITVPPGGIIYFPLIKKIKISDKEVDLLAN
EFENKLSRYIKNPMVIINVIKTKKLTATISGSVNTRGILKFDKPLSLQEVFSRAGGFTPEADLSSIIINTTEGKRVLNLI
ENPYLATTFKIKDHYSIYIPSKTRLITVMGQVKKPGSFPYKPDIRLFDALARAGFITDRADLTQIVINRDSPHKKKLKIK
IDRADLYNLNIDDTSNPVLKPGDIIYIPEKPYPDFEHLLSLIPFLNSLKNLLGVN

Sequences:

>Translated_295_residues
MGREHNHLIYIVLVILFLTLLITGPVLASYTIKEGDTVEISVWGHNDLRKVITVPPGGIIYFPLIKKIKISDKEVDLLAN
EFENKLSRYIKNPMVIINVIKTKKLTATISGSVNTRGILKFDKPLSLQEVFSRAGGFTPEADLSSIIINTTEGKRVLNLI
ENPYLATTFKIKDHYSIYIPSKTRLITVMGQVKKPGSFPYKPDIRLFDALARAGFITDRADLTQIVINRDSPHKKKLKIK
IDRADLYNLNIDDTSNPVLKPGDIIYIPEKPYPDFEHLLSLIPFLNSLKNLLGVN
>Mature_294_residues
GREHNHLIYIVLVILFLTLLITGPVLASYTIKEGDTVEISVWGHNDLRKVITVPPGGIIYFPLIKKIKISDKEVDLLANE
FENKLSRYIKNPMVIINVIKTKKLTATISGSVNTRGILKFDKPLSLQEVFSRAGGFTPEADLSSIIINTTEGKRVLNLIE
NPYLATTFKIKDHYSIYIPSKTRLITVMGQVKKPGSFPYKPDIRLFDALARAGFITDRADLTQIVINRDSPHKKKLKIKI
DRADLYNLNIDDTSNPVLKPGDIIYIPEKPYPDFEHLLSLIPFLNSLKNLLGVN

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=291, Percent_Identity=26.8041237113402, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1788376, Length=286, Percent_Identity=25.1748251748252, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 33264; Mature: 33132

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGREHNHLIYIVLVILFLTLLITGPVLASYTIKEGDTVEISVWGHNDLRKVITVPPGGII
CCCCCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEEEEEECCCCCEEEEECCCCCEE
YFPLIKKIKISDKEVDLLANEFENKLSRYIKNPMVIINVIKTKKLTATISGSVNTRGILK
EEECCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECEEEEEEEECCCCCCEEEE
FDKPLSLQEVFSRAGGFTPEADLSSIIINTTEGKRVLNLIENPYLATTFKIKDHYSIYIP
ECCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCEEEEEEEEECCEEEEEC
SKTRLITVMGQVKKPGSFPYKPDIRLFDALARAGFITDRADLTQIVINRDSPHKKKLKIK
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEE
IDRADLYNLNIDDTSNPVLKPGDIIYIPEKPYPDFEHLLSLIPFLNSLKNLLGVN
EECCEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GREHNHLIYIVLVILFLTLLITGPVLASYTIKEGDTVEISVWGHNDLRKVITVPPGGII
CCCCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEEEEEECCCCCEEEEECCCCCEE
YFPLIKKIKISDKEVDLLANEFENKLSRYIKNPMVIINVIKTKKLTATISGSVNTRGILK
EEECCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECEEEEEEEECCCCCCEEEE
FDKPLSLQEVFSRAGGFTPEADLSSIIINTTEGKRVLNLIENPYLATTFKIKDHYSIYIP
ECCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCEEEEEEEEECCEEEEEC
SKTRLITVMGQVKKPGSFPYKPDIRLFDALARAGFITDRADLTQIVINRDSPHKKKLKIK
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEE
IDRADLYNLNIDDTSNPVLKPGDIIYIPEKPYPDFEHLLSLIPFLNSLKNLLGVN
EECCEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]