Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220932965
Identifier: 220932965
GI number: 220932965
Start: 2322626
End: 2323117
Strand: Direct
Name: 220932965
Synonym: Hore_21330
Alternate gene names: NA
Gene position: 2322626-2323117 (Clockwise)
Preceding gene: 220932964
Following gene: 220932970
Centisome position: 90.09
GC content: 31.1
Gene sequence:
>492_bases ATGAAGGTATTACTGGCTTTGTTAAACATAAGTATATTTTTAGCTATAGTCATCGGGGCCAGCAAATATTTTTATTTTAC ATATCTAAAGCGTTTTACCACAAAAATTCTGCATAAATATAATTATACCCTTGATGACCTTAAATATTCTTTTGAAGAAA TAATATATTTTGTTACCCTGCCAACCAATAACCCGTTAATAATTAATTCATCCCTTGATGATTTGTATATTGAAAAAGAA TTTATTTCACATGTTTATCCCACTATAAATGGTCTTAAAATAATATTAAAAACCCCTGACTCCAGAGACATGCTTGTCGC CTACCTGGCCAGGGATAAATTCCGTATTCCTTTACTTGAAAAAATGGTCTATGTAGGGAAAATAGATAGTCAGACTTATA CCAGAATGACCGCTTACAAACTTGTCCATCCCCATACCATTAATGAAATTAAAGAAGAAGTACACCGTCAATTAAAAAGC AAAAGATATTAA
Upstream 100 bases:
>100_bases AGGAGGTTAAAGACCTGCTGGATAAAGCTGACCAGGCCCTTTATAAGGCAAAAAACAATGGGAAAAACAGGATAGAATTC TTTAGTCAGGGGGTATAGCT
Downstream 100 bases:
>100_bases GCTTGATGACTGGGTCTGATTACTACCTTTTTATTTCTTTCATCAACCTTTTCCAGTAATAGTAAAGAGAGATAATCATC TATTAACTTATCACCGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKVLLALLNISIFLAIVIGASKYFYFTYLKRFTTKILHKYNYTLDDLKYSFEEIIYFVTLPTNNPLIINSSLDDLYIEKE FISHVYPTINGLKIILKTPDSRDMLVAYLARDKFRIPLLEKMVYVGKIDSQTYTRMTAYKLVHPHTINEIKEEVHRQLKS KRY
Sequences:
>Translated_163_residues MKVLLALLNISIFLAIVIGASKYFYFTYLKRFTTKILHKYNYTLDDLKYSFEEIIYFVTLPTNNPLIINSSLDDLYIEKE FISHVYPTINGLKIILKTPDSRDMLVAYLARDKFRIPLLEKMVYVGKIDSQTYTRMTAYKLVHPHTINEIKEEVHRQLKS KRY >Mature_163_residues MKVLLALLNISIFLAIVIGASKYFYFTYLKRFTTKILHKYNYTLDDLKYSFEEIIYFVTLPTNNPLIINSSLDDLYIEKE FISHVYPTINGLKIILKTPDSRDMLVAYLARDKFRIPLLEKMVYVGKIDSQTYTRMTAYKLVHPHTINEIKEEVHRQLKS KRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19326; Mature: 19326
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLLALLNISIFLAIVIGASKYFYFTYLKRFTTKILHKYNYTLDDLKYSFEEIIYFVTL CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEE PTNNPLIINSSLDDLYIEKEFISHVYPTINGLKIILKTPDSRDMLVAYLARDKFRIPLLE CCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHH KMVYVGKIDSQTYTRMTAYKLVHPHTINEIKEEVHRQLKSKRY HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVLLALLNISIFLAIVIGASKYFYFTYLKRFTTKILHKYNYTLDDLKYSFEEIIYFVTL CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEE PTNNPLIINSSLDDLYIEKEFISHVYPTINGLKIILKTPDSRDMLVAYLARDKFRIPLLE CCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHH KMVYVGKIDSQTYTRMTAYKLVHPHTINEIKEEVHRQLKSKRY HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA