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The map label for this gene is ydgM [C]

Identifier: 220932902

GI number: 220932902

Start: 2239950

End: 2241062

Strand: Direct

Name: ydgM [C]

Synonym: Hore_20700

Alternate gene names: 220932902

Gene position: 2239950-2241062 (Clockwise)

Preceding gene: 220932872

Following gene: 220932913

Centisome position: 86.88

GC content: 41.33

Gene sequence:

>1113_bases
TTGGCCAGTCAAGTTTACTTTGCCAGTACAAGAGCTAGCGGTCATAATGAAAGTCTTGTTGAAAAACTGTACAAACTCTT
TTTTAAAGCCGGTTTTCATGAATTTATTGAAGAAGACGATCTTGTAGCCATAAAACTTCACTTCGGTGAAAAGGGAAATA
CCGGATTTATTCGCCCCCTCTATATCAGAAGGATTGTTGAAGCCATCAAATCAAGGAAAGGAAAACCCTTTTTAACAGAT
GCCAATACCCTTTATGTTGGAAGCAGGGCTAATTCGGTTGACCACCTGAATACAGCCATCGCCAATGGTTTTAGTTATGC
CACCATCCAGGCTCCATTGATAATAGCCGATGGACTAACAGGAAAAAACTTCACAGAAATACCGGTAAACCTTAAACACT
TTGATAAAATAAAAGTTGGTTCAGAAGTTATGCATGCCGATGCTCTAATCACTGTTTCCCACTTCAAAGGCCATGAATTA
ACAGGTTTTGGAGGCACCTTTAAAAATATTGGTATGGGACTGGGTAGTCGCAGTGGAAAACAGATGATGCATTCCGATGT
CCTGCCGGAAATAGATGAAGAAAAGTGTGAAAAATGCCGGAAATGTGTTAAATTCTGCCCTGAAAACGCAATTACCATTA
ATAAGGAGACAAGTACCATTGATCAGAATCTCTGTATCGGCTGTGGTGAATGTGTTGTTACCTGCCCCACCGATGCCATC
AAGATTCAATGGGAAAGTACCAGTCAGGGAGTTCAGGAACGTATTGTAGAATTCTCCTATGGTATTATTAAGGAGAAAAA
AGACAAGATAGGATATATAAACTTTGTCATGAATGTCACCCCTGATTGTGACTGTGCATCCTGGAGTGATAAATATATTG
TTGATGATATCGGTATCCTGGCCTCAAAAGATCCCCTGGCTCTGGAACAGGCGTCTTTTGACCTTGTCAATAAACAGGAT
GGACGCCACAACACTGCATTAAAGAAAAATCACAAACCAGGGGAAAACAAATTTAAAGGGGTCCACCCCAGTACCGACGG
TGGTGTCAGGACCCTTGAATATGCAGCCGAACTGGGGCTTGGCTCCCGTGACTACGAATTAATTGAAATATAA

Upstream 100 bases:

>100_bases
GAAGTGTTTACATATATATATTACGTTTGTAAGATTTCCGTATTTGTAATATAATTAAAATAGTATATCTTAACAGTTAA
TAAAAAAAGGAGGTATTACT

Downstream 100 bases:

>100_bases
TCTTTTACAGATTATATTAACTCTGGTTATACCCTGATTATCAACATAATCTGTTTTAATTTAACCCTTTACTCAAGTTA
TCAATACACTCTATTAATTG

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MASQVYFASTRASGHNESLVEKLYKLFFKAGFHEFIEEDDLVAIKLHFGEKGNTGFIRPLYIRRIVEAIKSRKGKPFLTD
ANTLYVGSRANSVDHLNTAIANGFSYATIQAPLIIADGLTGKNFTEIPVNLKHFDKIKVGSEVMHADALITVSHFKGHEL
TGFGGTFKNIGMGLGSRSGKQMMHSDVLPEIDEEKCEKCRKCVKFCPENAITINKETSTIDQNLCIGCGECVVTCPTDAI
KIQWESTSQGVQERIVEFSYGIIKEKKDKIGYINFVMNVTPDCDCASWSDKYIVDDIGILASKDPLALEQASFDLVNKQD
GRHNTALKKNHKPGENKFKGVHPSTDGGVRTLEYAAELGLGSRDYELIEI

Sequences:

>Translated_370_residues
MASQVYFASTRASGHNESLVEKLYKLFFKAGFHEFIEEDDLVAIKLHFGEKGNTGFIRPLYIRRIVEAIKSRKGKPFLTD
ANTLYVGSRANSVDHLNTAIANGFSYATIQAPLIIADGLTGKNFTEIPVNLKHFDKIKVGSEVMHADALITVSHFKGHEL
TGFGGTFKNIGMGLGSRSGKQMMHSDVLPEIDEEKCEKCRKCVKFCPENAITINKETSTIDQNLCIGCGECVVTCPTDAI
KIQWESTSQGVQERIVEFSYGIIKEKKDKIGYINFVMNVTPDCDCASWSDKYIVDDIGILASKDPLALEQASFDLVNKQD
GRHNTALKKNHKPGENKFKGVHPSTDGGVRTLEYAAELGLGSRDYELIEI
>Mature_369_residues
ASQVYFASTRASGHNESLVEKLYKLFFKAGFHEFIEEDDLVAIKLHFGEKGNTGFIRPLYIRRIVEAIKSRKGKPFLTDA
NTLYVGSRANSVDHLNTAIANGFSYATIQAPLIIADGLTGKNFTEIPVNLKHFDKIKVGSEVMHADALITVSHFKGHELT
GFGGTFKNIGMGLGSRSGKQMMHSDVLPEIDEEKCEKCRKCVKFCPENAITINKETSTIDQNLCIGCGECVVTCPTDAIK
IQWESTSQGVQERIVEFSYGIIKEKKDKIGYINFVMNVTPDCDCASWSDKYIVDDIGILASKDPLALEQASFDLVNKQDG
RHNTALKKNHKPGENKFKGVHPSTDGGVRTLEYAAELGLGSRDYELIEI

Specific function: Unknown

COG id: COG2768

COG function: function code R; Uncharacterized Fe-S center protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40969; Mature: 40838

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQVYFASTRASGHNESLVEKLYKLFFKAGFHEFIEEDDLVAIKLHFGEKGNTGFIRPL
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHH
YIRRIVEAIKSRKGKPFLTDANTLYVGSRANSVDHLNTAIANGFSYATIQAPLIIADGLT
HHHHHHHHHHCCCCCCEEECCCEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEEEECCCC
GKNFTEIPVNLKHFDKIKVGSEVMHADALITVSHFKGHELTGFGGTFKNIGMGLGSRSGK
CCCCEECCCCHHHHHHHHCCCHHHHCCEEEEEECCCCCEECCCCCCHHHHCCCCCCCCCH
QMMHSDVLPEIDEEKCEKCRKCVKFCPENAITINKETSTIDQNLCIGCGECVVTCPTDAI
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEECCCEEEECCCCEE
KIQWESTSQGVQERIVEFSYGIIKEKKDKIGYINFVMNVTPDCDCASWSDKYIVDDIGIL
EEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEE
ASKDPLALEQASFDLVNKQDGRHNTALKKNHKPGENKFKGVHPSTDGGVRTLEYAAELGL
ECCCCCCHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
GSRDYELIEI
CCCCCEEEEC
>Mature Secondary Structure 
ASQVYFASTRASGHNESLVEKLYKLFFKAGFHEFIEEDDLVAIKLHFGEKGNTGFIRPL
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHH
YIRRIVEAIKSRKGKPFLTDANTLYVGSRANSVDHLNTAIANGFSYATIQAPLIIADGLT
HHHHHHHHHHCCCCCCEEECCCEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEEEECCCC
GKNFTEIPVNLKHFDKIKVGSEVMHADALITVSHFKGHELTGFGGTFKNIGMGLGSRSGK
CCCCEECCCCHHHHHHHHCCCHHHHCCEEEEEECCCCCEECCCCCCHHHHCCCCCCCCCH
QMMHSDVLPEIDEEKCEKCRKCVKFCPENAITINKETSTIDQNLCIGCGECVVTCPTDAI
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEECCCEEEECCCCEE
KIQWESTSQGVQERIVEFSYGIIKEKKDKIGYINFVMNVTPDCDCASWSDKYIVDDIGIL
EEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEE
ASKDPLALEQASFDLVNKQDGRHNTALKKNHKPGENKFKGVHPSTDGGVRTLEYAAELGL
ECCCCCCHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
GSRDYELIEI
CCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA