Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220932431
Identifier: 220932431
GI number: 220932431
Start: 1709811
End: 1710377
Strand: Direct
Name: 220932431
Synonym: Hore_15950
Alternate gene names: NA
Gene position: 1709811-1710377 (Clockwise)
Preceding gene: 220932402
Following gene: 220932432
Centisome position: 66.32
GC content: 38.98
Gene sequence:
>567_bases GTGAATTCCATAGAAGTCTCAACAGCTATAGAAAATAGAAGGGCCTACCGCTCTCTGGATAAAGTTGATATCACTGACGA TTTAATCAATCAACTGGGGCGGGCTGCTTCTCTGGCTCCATCATGTTTTAATAAACAACCCTGGAGATATGTTTTTGTTT ATAACAAAAGACAACTAAAAACACTCCATACCAGTCTACCCGATGGAAATGCCTGGGCTAAAGATGGTTCTCTAATTATT GCCGTTGTAAGCAGCAAGGATATGGACTGTGTTGTGTCCGGTCGTGAATACTTTCTTTTTGACGTAGGACTATCCTGTGC TAATCTTATTCTCAGGGCAACTGAACTGAACCTGGTAGCCCATCCAATTGCCGGTTATGATGAAGATAAAGTAAAAAAGA TTCTGAATATACCTGATGAAAAAACTGTTATAACCCTCATTATAATTGGAAAACATAGAAAAGGAGATAATCCTAACCTG ACTGATAACCAGAAAGAAAGGGAACTAAAAAGACCTGTCCGCTTACCGCTCGAGAAGATTGTCTTTCATAATCATTACCA TTCTTAA
Upstream 100 bases:
>100_bases AACCAATTGAGTTTATTTTGTTTCTTTTGTTAAAGAATTCTGGTATAATATATTTATAAATGTTATTAATTTCTTTATTT TTTGGAACTTTTAGAAGGAG
Downstream 100 bases:
>100_bases ATATAAATAATTATGGGAAAATTGTTAAAATTAATAAGCACCTGTAAAAATATTTTAGAAAGGGGGTTAAACAATGGCTA ATACTTACCATGAAGAGAAT
Product: nitroreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein; Bacterioferritin Comigratory Protein/NADH Dehydrogenase; NADH Dehydrogenase; Oxidoreductase; Oxygen-Insensitive Nitroreductase; NAD(P)H-Flavin Oxidoreductase
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNSIEVSTAIENRRAYRSLDKVDITDDLINQLGRAASLAPSCFNKQPWRYVFVYNKRQLKTLHTSLPDGNAWAKDGSLII AVVSSKDMDCVVSGREYFLFDVGLSCANLILRATELNLVAHPIAGYDEDKVKKILNIPDEKTVITLIIIGKHRKGDNPNL TDNQKERELKRPVRLPLEKIVFHNHYHS
Sequences:
>Translated_188_residues MNSIEVSTAIENRRAYRSLDKVDITDDLINQLGRAASLAPSCFNKQPWRYVFVYNKRQLKTLHTSLPDGNAWAKDGSLII AVVSSKDMDCVVSGREYFLFDVGLSCANLILRATELNLVAHPIAGYDEDKVKKILNIPDEKTVITLIIIGKHRKGDNPNL TDNQKERELKRPVRLPLEKIVFHNHYHS >Mature_188_residues MNSIEVSTAIENRRAYRSLDKVDITDDLINQLGRAASLAPSCFNKQPWRYVFVYNKRQLKTLHTSLPDGNAWAKDGSLII AVVSSKDMDCVVSGREYFLFDVGLSCANLILRATELNLVAHPIAGYDEDKVKKILNIPDEKTVITLIIIGKHRKGDNPNL TDNQKERELKRPVRLPLEKIVFHNHYHS
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21355; Mature: 21355
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIEVSTAIENRRAYRSLDKVDITDDLINQLGRAASLAPSCFNKQPWRYVFVYNKRQLK CCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCCHHH TLHTSLPDGNAWAKDGSLIIAVVSSKDMDCVVSGREYFLFDVGLSCANLILRATELNLVA HHHHCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHEEE HPIAGYDEDKVKKILNIPDEKTVITLIIIGKHRKGDNPNLTDNQKERELKRPVRLPLEKI CCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCHHHH VFHNHYHS HHHCCCCC >Mature Secondary Structure MNSIEVSTAIENRRAYRSLDKVDITDDLINQLGRAASLAPSCFNKQPWRYVFVYNKRQLK CCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCCHHH TLHTSLPDGNAWAKDGSLIIAVVSSKDMDCVVSGREYFLFDVGLSCANLILRATELNLVA HHHHCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHEEE HPIAGYDEDKVKKILNIPDEKTVITLIIIGKHRKGDNPNLTDNQKERELKRPVRLPLEKI CCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCHHHH VFHNHYHS HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA