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The map label for this gene is ybbM [C]

Identifier: 220932399

GI number: 220932399

Start: 1673617

End: 1674399

Strand: Direct

Name: ybbM [C]

Synonym: Hore_15630

Alternate gene names: 220932399

Gene position: 1673617-1674399 (Clockwise)

Preceding gene: 220932398

Following gene: 220932402

Centisome position: 64.92

GC content: 39.72

Gene sequence:

>783_bases
ATGGATGAACTCGTAAATATAACCCTCATCAGGTTAATTTCAGCCTATATATTTATCCTTTTTCTTTTAATGATAGTCAA
AACACAGAAAATAGGTCACGAATGGGAAATAATCCTGGCAACAGGTCGGATGACAGTACAGCTTATTCTGGTGGGGTATG
TTCTGACCTATATTTTTAACCATCCAGATATCTTTTTAAGCCTCGGAGTATTGGCATTAATGGAACTCTTTGCTATTCAT
AATATCTTTTCACGGGTTAAAAGCGAAATCAATAAAAAACTTAAATATTTAATTACTATAGCTATGGTGACCGGAACAGG
AACGAGTATTGCCTTTTTTACCTTTATTATTTTAAATCTAAAACCATGGTATCTCCCCCAGTATATTATTCCGATCTCCG
GAATGTTAATTGGTAACTCCATGACCGGTATTACCCTTGGGGTCGAAGGGTTAACCGGAGGAATTAAAGATAATAAAGAA
ATGATTGAAAATGCCTTGATGCTCGGTGCCACCCCTGAGTTATCAACCAGGGATATTGCCAATAGGGCTTTTTACAATGC
CCTCTTACCAACCCTCAATTCTATGATCGGGATGGGAATTATCTTTCTCCCGAGTATGATGACCGGACAAATTCTGGCCG
GGGCTTCCCCCCTGGTGGCCATAAGATATCAGCTGGCCATCATGCTGGGAATTACCGGCAGTGTTACCCTGACAGTATAT
ATACTGGTAAGGTGGGGGGCGAGAACATATTTTAATAAAAGGGCCCAGCTTGAATTATCTTAA

Upstream 100 bases:

>100_bases
TCACCCATTCCAGTCTAATTGCCAACAAATTTGCCGAGAAAACTATAGTTGTTAATGAAGGAACCGTTGAAAAAGTAATA
GAAAGGTAGGGGATTAAGTG

Downstream 100 bases:

>100_bases
ATTTTAAAAAAATAAATGACAAAAAAAGCCTGGCTTTTTTTAGCCAGGCTTTTTTATATTGCTTGTCTATAATAATATAT
TTTTATCTATGTTTAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDELVNITLIRLISAYIFILFLLMIVKTQKIGHEWEIILATGRMTVQLILVGYVLTYIFNHPDIFLSLGVLALMELFAIH
NIFSRVKSEINKKLKYLITIAMVTGTGTSIAFFTFIILNLKPWYLPQYIIPISGMLIGNSMTGITLGVEGLTGGIKDNKE
MIENALMLGATPELSTRDIANRAFYNALLPTLNSMIGMGIIFLPSMMTGQILAGASPLVAIRYQLAIMLGITGSVTLTVY
ILVRWGARTYFNKRAQLELS

Sequences:

>Translated_260_residues
MDELVNITLIRLISAYIFILFLLMIVKTQKIGHEWEIILATGRMTVQLILVGYVLTYIFNHPDIFLSLGVLALMELFAIH
NIFSRVKSEINKKLKYLITIAMVTGTGTSIAFFTFIILNLKPWYLPQYIIPISGMLIGNSMTGITLGVEGLTGGIKDNKE
MIENALMLGATPELSTRDIANRAFYNALLPTLNSMIGMGIIFLPSMMTGQILAGASPLVAIRYQLAIMLGITGSVTLTVY
ILVRWGARTYFNKRAQLELS
>Mature_260_residues
MDELVNITLIRLISAYIFILFLLMIVKTQKIGHEWEIILATGRMTVQLILVGYVLTYIFNHPDIFLSLGVLALMELFAIH
NIFSRVKSEINKKLKYLITIAMVTGTGTSIAFFTFIILNLKPWYLPQYIIPISGMLIGNSMTGITLGVEGLTGGIKDNKE
MIENALMLGATPELSTRDIANRAFYNALLPTLNSMIGMGIIFLPSMMTGQILAGASPLVAIRYQLAIMLGITGSVTLTVY
ILVRWGARTYFNKRAQLELS

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=254, Percent_Identity=32.6771653543307, Blast_Score=127, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28901; Mature: 28901

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELVNITLIRLISAYIFILFLLMIVKTQKIGHEWEIILATGRMTVQLILVGYVLTYIFN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHC
HPDIFLSLGVLALMELFAIHNIFSRVKSEINKKLKYLITIAMVTGTGTSIAFFTFIILNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHC
KPWYLPQYIIPISGMLIGNSMTGITLGVEGLTGGIKDNKEMIENALMLGATPELSTRDIA
CCCCCCHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
NRAFYNALLPTLNSMIGMGIIFLPSMMTGQILAGASPLVAIRYQLAIMLGITGSVTLTVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHCCCCHHHHHEE
ILVRWGARTYFNKRAQLELS
EHHHHCHHHHHCCCEEEEEC
>Mature Secondary Structure
MDELVNITLIRLISAYIFILFLLMIVKTQKIGHEWEIILATGRMTVQLILVGYVLTYIFN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHC
HPDIFLSLGVLALMELFAIHNIFSRVKSEINKKLKYLITIAMVTGTGTSIAFFTFIILNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHC
KPWYLPQYIIPISGMLIGNSMTGITLGVEGLTGGIKDNKEMIENALMLGATPELSTRDIA
CCCCCCHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
NRAFYNALLPTLNSMIGMGIIFLPSMMTGQILAGASPLVAIRYQLAIMLGITGSVTLTVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHCCCCHHHHHEE
ILVRWGARTYFNKRAQLELS
EHHHHCHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]