Click here to switch to the map view.

The map label for this gene is 220932209

Identifier: 220932209

GI number: 220932209

Start: 1465250

End: 1465672

Strand: Direct

Name: 220932209

Synonym: Hore_13700

Alternate gene names: NA

Gene position: 1465250-1465672 (Clockwise)

Preceding gene: 220932208

Following gene: 220932210

Centisome position: 56.83

GC content: 24.11

Gene sequence:

>423_bases
ATGAAAAAAATTACAATTGATCTTAATGTTATTCTTGATTTTTTAAACAAAAGAAAAAAACATGTACAAGCAGCTAAAAT
AATAGAATTATGCAATGACAACCAAATTCAAGGATATATATGTGCACATGAAATTACCACTTTAGCTTATTTTCTTATGA
AAAATTACAATAACTCTAACAAAGTAAAATTTGTTCTTAATGAACTTTTAGATATGTTTAAAATAATACCAATAACAGAA
ACAATCCTAAGAAAAGCCTTAAATTCCAAAATTAAAGATTTTGAAGATGCAGTAATAGAAATCAGTTCACATGAAAACGA
AATAGATTATATAGTTACACGAAATTTAGATGATTTTAAACACAGTAGTGTGAAATCGATTAGTCCAACTGAATTTCTTG
CTCTCTATAATAAATTTAATTAG

Upstream 100 bases:

>100_bases
AATCCTGATAAAAATAATTTTAAACCCAAAATAAATAAGTTATATGGTGCCTTTGAAAGCCAACCTATTCCAGATAAAAA
AGAGTTGAGGAGAAATTTTC

Downstream 100 bases:

>100_bases
GGATTTCAGATAACGTTCCTGGCATTTCCGACGTTGCCGTTCCATCAGGATTGGCATGGCTTTGGCTGCAACAACCCCTT
CCCTCTTTTTATGCAAAAGA

Product: PIN domain-containing protein

Products: NA

Alternate protein names: PilT Protein Domain Protein; PIN Domain Protein; Pilt Protein Domain Protein

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKKITIDLNVILDFLNKRKKHVQAAKIIELCNDNQIQGYICAHEITTLAYFLMKNYNNSNKVKFVLNELLDMFKIIPITE
TILRKALNSKIKDFEDAVIEISSHENEIDYIVTRNLDDFKHSSVKSISPTEFLALYNKFN

Sequences:

>Translated_140_residues
MKKITIDLNVILDFLNKRKKHVQAAKIIELCNDNQIQGYICAHEITTLAYFLMKNYNNSNKVKFVLNELLDMFKIIPITE
TILRKALNSKIKDFEDAVIEISSHENEIDYIVTRNLDDFKHSSVKSISPTEFLALYNKFN
>Mature_140_residues
MKKITIDLNVILDFLNKRKKHVQAAKIIELCNDNQIQGYICAHEITTLAYFLMKNYNNSNKVKFVLNELLDMFKIIPITE
TILRKALNSKIKDFEDAVIEISSHENEIDYIVTRNLDDFKHSSVKSISPTEFLALYNKFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16327; Mature: 16327

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITIDLNVILDFLNKRKKHVQAAKIIELCNDNQIQGYICAHEITTLAYFLMKNYNNSN
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCC
KVKFVLNELLDMFKIIPITETILRKALNSKIKDFEDAVIEISSHENEIDYIVTRNLDDFK
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCHHH
HSSVKSISPTEFLALYNKFN
HCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKKITIDLNVILDFLNKRKKHVQAAKIIELCNDNQIQGYICAHEITTLAYFLMKNYNNSN
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCC
KVKFVLNELLDMFKIIPITETILRKALNSKIKDFEDAVIEISSHENEIDYIVTRNLDDFK
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCHHH
HSSVKSISPTEFLALYNKFN
HCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA