Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
---|---|
Accession | NC_011899 |
Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220932191
Identifier: 220932191
GI number: 220932191
Start: 1450980
End: 1451777
Strand: Direct
Name: 220932191
Synonym: Hore_13540
Alternate gene names: NA
Gene position: 1450980-1451777 (Clockwise)
Preceding gene: 220932190
Following gene: 220932208
Centisome position: 56.28
GC content: 32.83
Gene sequence:
>798_bases ATGGGTAAAAAATTTTCACAAATTCAAACCAAAATGGAAAGGAAATTTCTTAAGCGTATAAAAAAACATCCCGATAAAGT CATTATGGCCCACAAGAATTCTGTACAGGAAGGGTTTGAATATTTCGAGTCTAAACATGGTTTATTAATAAAAAATATGT TTTTTGCAATGGGATTAAAAAATGCTTTGAAAATACTAAAAATAATGGCTAAATATATGCCTTCTATGCTTCGCGAAAGA AATAAATGTTTTACAGATCTAGAAGAATATCTTAATGAAATTAATGAAAGTGGTCAAATTTCATCAACGGCTCAAGAAAA ATACCTAATTGAAAGTTATCCAAATAAAGAATTATGGAATAAATTAAAAAACTATGCATGGGAAAAGTGGGGAGTTATCA TTGGCTTTACTGAACTGCCAAGACAACTAATATTTAAAGATAAAGCTGTCTTATTTAAATATGCCCTGGTCTGTATCCAG GAAATGGATAAAAATAAAATAGATTTGGCTCCTGAGCTTGATGCGGGAGAAGAAGTACAGAGAGTTTATAATTCATTAGG AATTGCTGTAAACGATATCGCTAACTGGTTACGTAAAAATTTCGGAATCAAATGTCAAAGCAACCACCCTCTTGGTGGTC TGGTAGATACATCACCTTTAGCAGGTAAAGCTGGACTGGGTTGGCAAGGACATAACGGATTATTAATTACTCCACAATTC GGACCCCGTAACCGAATTGCACCAATTTTGATAAAAAATAAGCTTTTTGAATTTACCGATAATCACGAACATGTCTGA
Upstream 100 bases:
>100_bases TTAACACCTGTATAGAAAAACTGATTACTGATCTTCTTGAATAAAATCTTTTATCTTTAATGCAAGTAAGTAATTACATT CACTAAAGGGGGAACCTTAT
Downstream 100 bases:
>100_bases ATTGAAAATTTTTGTGAAAAATGTAGAAAATGTGAAAAATCATGTCCTACTCAGGCAATCTATCCTAAAAAACAACCATC TATTGAAAATATTCCGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGKKFSQIQTKMERKFLKRIKKHPDKVIMAHKNSVQEGFEYFESKHGLLIKNMFFAMGLKNALKILKIMAKYMPSMLRER NKCFTDLEEYLNEINESGQISSTAQEKYLIESYPNKELWNKLKNYAWEKWGVIIGFTELPRQLIFKDKAVLFKYALVCIQ EMDKNKIDLAPELDAGEEVQRVYNSLGIAVNDIANWLRKNFGIKCQSNHPLGGLVDTSPLAGKAGLGWQGHNGLLITPQF GPRNRIAPILIKNKLFEFTDNHEHV
Sequences:
>Translated_265_residues MGKKFSQIQTKMERKFLKRIKKHPDKVIMAHKNSVQEGFEYFESKHGLLIKNMFFAMGLKNALKILKIMAKYMPSMLRER NKCFTDLEEYLNEINESGQISSTAQEKYLIESYPNKELWNKLKNYAWEKWGVIIGFTELPRQLIFKDKAVLFKYALVCIQ EMDKNKIDLAPELDAGEEVQRVYNSLGIAVNDIANWLRKNFGIKCQSNHPLGGLVDTSPLAGKAGLGWQGHNGLLITPQF GPRNRIAPILIKNKLFEFTDNHEHV >Mature_264_residues GKKFSQIQTKMERKFLKRIKKHPDKVIMAHKNSVQEGFEYFESKHGLLIKNMFFAMGLKNALKILKIMAKYMPSMLRERN KCFTDLEEYLNEINESGQISSTAQEKYLIESYPNKELWNKLKNYAWEKWGVIIGFTELPRQLIFKDKAVLFKYALVCIQE MDKNKIDLAPELDAGEEVQRVYNSLGIAVNDIANWLRKNFGIKCQSNHPLGGLVDTSPLAGKAGLGWQGHNGLLITPQFG PRNRIAPILIKNKLFEFTDNHEHV
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30606; Mature: 30475
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKFSQIQTKMERKFLKRIKKHPDKVIMAHKNSVQEGFEYFESKHGLLIKNMFFAMGLK CCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH NALKILKIMAKYMPSMLRERNKCFTDLEEYLNEINESGQISSTAQEKYLIESYPNKELWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHH KLKNYAWEKWGVIIGFTELPRQLIFKDKAVLFKYALVCIQEMDKNKIDLAPELDAGEEVQ HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH RVYNSLGIAVNDIANWLRKNFGIKCQSNHPLGGLVDTSPLAGKAGLGWQGHNGLLITPQF HHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC GPRNRIAPILIKNKLFEFTDNHEHV CCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GKKFSQIQTKMERKFLKRIKKHPDKVIMAHKNSVQEGFEYFESKHGLLIKNMFFAMGLK CCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH NALKILKIMAKYMPSMLRERNKCFTDLEEYLNEINESGQISSTAQEKYLIESYPNKELWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHH KLKNYAWEKWGVIIGFTELPRQLIFKDKAVLFKYALVCIQEMDKNKIDLAPELDAGEEVQ HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH RVYNSLGIAVNDIANWLRKNFGIKCQSNHPLGGLVDTSPLAGKAGLGWQGHNGLLITPQF HHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC GPRNRIAPILIKNKLFEFTDNHEHV CCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA