Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932191

Identifier: 220932191

GI number: 220932191

Start: 1450980

End: 1451777

Strand: Direct

Name: 220932191

Synonym: Hore_13540

Alternate gene names: NA

Gene position: 1450980-1451777 (Clockwise)

Preceding gene: 220932190

Following gene: 220932208

Centisome position: 56.28

GC content: 32.83

Gene sequence:

>798_bases
ATGGGTAAAAAATTTTCACAAATTCAAACCAAAATGGAAAGGAAATTTCTTAAGCGTATAAAAAAACATCCCGATAAAGT
CATTATGGCCCACAAGAATTCTGTACAGGAAGGGTTTGAATATTTCGAGTCTAAACATGGTTTATTAATAAAAAATATGT
TTTTTGCAATGGGATTAAAAAATGCTTTGAAAATACTAAAAATAATGGCTAAATATATGCCTTCTATGCTTCGCGAAAGA
AATAAATGTTTTACAGATCTAGAAGAATATCTTAATGAAATTAATGAAAGTGGTCAAATTTCATCAACGGCTCAAGAAAA
ATACCTAATTGAAAGTTATCCAAATAAAGAATTATGGAATAAATTAAAAAACTATGCATGGGAAAAGTGGGGAGTTATCA
TTGGCTTTACTGAACTGCCAAGACAACTAATATTTAAAGATAAAGCTGTCTTATTTAAATATGCCCTGGTCTGTATCCAG
GAAATGGATAAAAATAAAATAGATTTGGCTCCTGAGCTTGATGCGGGAGAAGAAGTACAGAGAGTTTATAATTCATTAGG
AATTGCTGTAAACGATATCGCTAACTGGTTACGTAAAAATTTCGGAATCAAATGTCAAAGCAACCACCCTCTTGGTGGTC
TGGTAGATACATCACCTTTAGCAGGTAAAGCTGGACTGGGTTGGCAAGGACATAACGGATTATTAATTACTCCACAATTC
GGACCCCGTAACCGAATTGCACCAATTTTGATAAAAAATAAGCTTTTTGAATTTACCGATAATCACGAACATGTCTGA

Upstream 100 bases:

>100_bases
TTAACACCTGTATAGAAAAACTGATTACTGATCTTCTTGAATAAAATCTTTTATCTTTAATGCAAGTAAGTAATTACATT
CACTAAAGGGGGAACCTTAT

Downstream 100 bases:

>100_bases
ATTGAAAATTTTTGTGAAAAATGTAGAAAATGTGAAAAATCATGTCCTACTCAGGCAATCTATCCTAAAAAACAACCATC
TATTGAAAATATTCCGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MGKKFSQIQTKMERKFLKRIKKHPDKVIMAHKNSVQEGFEYFESKHGLLIKNMFFAMGLKNALKILKIMAKYMPSMLRER
NKCFTDLEEYLNEINESGQISSTAQEKYLIESYPNKELWNKLKNYAWEKWGVIIGFTELPRQLIFKDKAVLFKYALVCIQ
EMDKNKIDLAPELDAGEEVQRVYNSLGIAVNDIANWLRKNFGIKCQSNHPLGGLVDTSPLAGKAGLGWQGHNGLLITPQF
GPRNRIAPILIKNKLFEFTDNHEHV

Sequences:

>Translated_265_residues
MGKKFSQIQTKMERKFLKRIKKHPDKVIMAHKNSVQEGFEYFESKHGLLIKNMFFAMGLKNALKILKIMAKYMPSMLRER
NKCFTDLEEYLNEINESGQISSTAQEKYLIESYPNKELWNKLKNYAWEKWGVIIGFTELPRQLIFKDKAVLFKYALVCIQ
EMDKNKIDLAPELDAGEEVQRVYNSLGIAVNDIANWLRKNFGIKCQSNHPLGGLVDTSPLAGKAGLGWQGHNGLLITPQF
GPRNRIAPILIKNKLFEFTDNHEHV
>Mature_264_residues
GKKFSQIQTKMERKFLKRIKKHPDKVIMAHKNSVQEGFEYFESKHGLLIKNMFFAMGLKNALKILKIMAKYMPSMLRERN
KCFTDLEEYLNEINESGQISSTAQEKYLIESYPNKELWNKLKNYAWEKWGVIIGFTELPRQLIFKDKAVLFKYALVCIQE
MDKNKIDLAPELDAGEEVQRVYNSLGIAVNDIANWLRKNFGIKCQSNHPLGGLVDTSPLAGKAGLGWQGHNGLLITPQFG
PRNRIAPILIKNKLFEFTDNHEHV

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30606; Mature: 30475

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKFSQIQTKMERKFLKRIKKHPDKVIMAHKNSVQEGFEYFESKHGLLIKNMFFAMGLK
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NALKILKIMAKYMPSMLRERNKCFTDLEEYLNEINESGQISSTAQEKYLIESYPNKELWN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHH
KLKNYAWEKWGVIIGFTELPRQLIFKDKAVLFKYALVCIQEMDKNKIDLAPELDAGEEVQ
HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
RVYNSLGIAVNDIANWLRKNFGIKCQSNHPLGGLVDTSPLAGKAGLGWQGHNGLLITPQF
HHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
GPRNRIAPILIKNKLFEFTDNHEHV
CCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GKKFSQIQTKMERKFLKRIKKHPDKVIMAHKNSVQEGFEYFESKHGLLIKNMFFAMGLK
CCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NALKILKIMAKYMPSMLRERNKCFTDLEEYLNEINESGQISSTAQEKYLIESYPNKELWN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHH
KLKNYAWEKWGVIIGFTELPRQLIFKDKAVLFKYALVCIQEMDKNKIDLAPELDAGEEVQ
HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
RVYNSLGIAVNDIANWLRKNFGIKCQSNHPLGGLVDTSPLAGKAGLGWQGHNGLLITPQF
HHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
GPRNRIAPILIKNKLFEFTDNHEHV
CCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA