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The map label for this gene is 220931921

Identifier: 220931921

GI number: 220931921

Start: 1172751

End: 1173488

Strand: Direct

Name: 220931921

Synonym: Hore_10800

Alternate gene names: NA

Gene position: 1172751-1173488 (Clockwise)

Preceding gene: 220931920

Following gene: 220931922

Centisome position: 45.49

GC content: 30.08

Gene sequence:

>738_bases
ATGAAAAAGTTTATATCTAAACTGGGTTTGGTTTTATTGTTGATAATGTTAGTAACAGCTACTGTCGCTGCAGAAAATTT
ATTACAGAAAGGAATTAAAGCCTATAATAATAGGGAGTACAATAAAGCCATTGATTATTTAACCAGTTACTCAGCTGAAC
ATAAGAATAATCATCTTGGTTATTTTTATCTGGGATTGACGTATTTAAAGATGGATGAATATGACCTGGCTGTAGATTCA
TTAAAAGTAGCCAATAAATTGAAGGAAAATAACTATAATATTCTTGTAAATATAGGAAGGGCATATTATTATAATAAAAA
ATATGATGATGTTATTACATATTTAAATAAGGCAAAAGAACTGGAAAATAAAGATGATCAGGTCTATAATCTACTGGGGT
TAATTTATTTAAACCGTACTGATTATCAGAAAGCTGTTTCTAATTTCAAAAAGGCGGTAGAACTTGATAGTGATAATTAT
TATGCTTTGAACAATCTTGGCTTTTCTTTTATCCTTCAGGGTAAATACGAAGAAGCAGAGATTTATTTAGAAAAGGCTGT
CAAGTTGAACCCTCCGGTAGCTTTTATTTATAATAATTACGGTATTACTAAAGAAAACCTGAGTAAATTAAAAGAAGCAT
TAAAGGCATATAAAAAGGCCCTTGAGGTTAACCCCGATTATCAGAAAGCTGCCAGAAATGTGGAGAGGGTTAAAAAACTT
ATTGAAAAAGGAGAATAA

Upstream 100 bases:

>100_bases
TTGATTTAAATATATAGAAATTAAATATATTTGGTACTTACACAGGTAAATATGTGGTATTAAAGATAAATAATACTTTT
AATCAGGGAGGTATATATTT

Downstream 100 bases:

>100_bases
TATTCAACAGAGGATGAATATTAATACATAAACTGGTTAAAATTTATTATCTAAATAAAATCTGTTTTGCGAAAAAACAT
GTAAAAAAATAAAACAATGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKFISKLGLVLLLIMLVTATVAAENLLQKGIKAYNNREYNKAIDYLTSYSAEHKNNHLGYFYLGLTYLKMDEYDLAVDS
LKVANKLKENNYNILVNIGRAYYYNKKYDDVITYLNKAKELENKDDQVYNLLGLIYLNRTDYQKAVSNFKKAVELDSDNY
YALNNLGFSFILQGKYEEAEIYLEKAVKLNPPVAFIYNNYGITKENLSKLKEALKAYKKALEVNPDYQKAARNVERVKKL
IEKGE

Sequences:

>Translated_245_residues
MKKFISKLGLVLLLIMLVTATVAAENLLQKGIKAYNNREYNKAIDYLTSYSAEHKNNHLGYFYLGLTYLKMDEYDLAVDS
LKVANKLKENNYNILVNIGRAYYYNKKYDDVITYLNKAKELENKDDQVYNLLGLIYLNRTDYQKAVSNFKKAVELDSDNY
YALNNLGFSFILQGKYEEAEIYLEKAVKLNPPVAFIYNNYGITKENLSKLKEALKAYKKALEVNPDYQKAARNVERVKKL
IEKGE
>Mature_245_residues
MKKFISKLGLVLLLIMLVTATVAAENLLQKGIKAYNNREYNKAIDYLTSYSAEHKNNHLGYFYLGLTYLKMDEYDLAVDS
LKVANKLKENNYNILVNIGRAYYYNKKYDDVITYLNKAKELENKDDQVYNLLGLIYLNRTDYQKAVSNFKKAVELDSDNY
YALNNLGFSFILQGKYEEAEIYLEKAVKLNPPVAFIYNNYGITKENLSKLKEALKAYKKALEVNPDYQKAARNVERVKKL
IEKGE

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 7 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=200, Percent_Identity=25, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI32307150, Length=200, Percent_Identity=25, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 28408; Mature: 28408

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFISKLGLVLLLIMLVTATVAAENLLQKGIKAYNNREYNKAIDYLTSYSAEHKNNHLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCE
YFYLGLTYLKMDEYDLAVDSLKVANKLKENNYNILVNIGRAYYYNKKYDDVITYLNKAKE
EEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHHHHH
LENKDDQVYNLLGLIYLNRTDYQKAVSNFKKAVELDSDNYYALNNLGFSFILQGKYEEAE
HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCHHHH
IYLEKAVKLNPPVAFIYNNYGITKENLSKLKEALKAYKKALEVNPDYQKAARNVERVKKL
HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IEKGE
HHCCC
>Mature Secondary Structure
MKKFISKLGLVLLLIMLVTATVAAENLLQKGIKAYNNREYNKAIDYLTSYSAEHKNNHLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCE
YFYLGLTYLKMDEYDLAVDSLKVANKLKENNYNILVNIGRAYYYNKKYDDVITYLNKAKE
EEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHHHHH
LENKDDQVYNLLGLIYLNRTDYQKAVSNFKKAVELDSDNYYALNNLGFSFILQGKYEEAE
HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCHHHH
IYLEKAVKLNPPVAFIYNNYGITKENLSKLKEALKAYKKALEVNPDYQKAARNVERVKKL
HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IEKGE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]