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The map label for this gene is yphB [H]

Identifier: 220931891

GI number: 220931891

Start: 1138557

End: 1139447

Strand: Direct

Name: yphB [H]

Synonym: Hore_10480

Alternate gene names: 220931891

Gene position: 1138557-1139447 (Clockwise)

Preceding gene: 220931890

Following gene: 220931892

Centisome position: 44.16

GC content: 39.51

Gene sequence:

>891_bases
ATGTTTGAATATGGTGACCTTCTGGTAACAAGCCTCCTGGTGGGGTCAATTTCGCGGGGATTAATGCTAAATGTTGACTA
TCGCCAGTTTCCCAGTTATCCCCATTCCTATGTGATACATTTAACCCTGGGTATGATTGCCTCTGCCCTGGGGGCTCTGG
TTTTACCGGCTCTGGCGGAAAAGGAATATATTGCGGTAACTTTTTTGACTATTGGAGCTCAACAATTCAGGGATGTGAGA
AACCTGGAACGGGAGAGTCTGGCCAGAATTGAAGAGACAGAGTTAATACCACGTGGTAAGGCTTATATTGAAGGGATTGC
AAAACTTTTTGAAGCCAGGAATTACCTTGCCTTAATTACTTCCCTGGTTACAAGTATTATCTTTTTTTATACCAATATTT
ATCTGGCTGTAAGTGGAGGATTTTTAATAGCATATTTACTTCATCGGTTTATGAAAGGCCCTTATGTCTCAGATATAGCC
AGGGTAAAAATAGTTCCTATAAACTTTAAAGGTAAAAATATAGGAATTGACGATGTGATTATTATGAATGTAGGTGAAGA
AGAGGCTTTTCAGAAGTGGTATAATGAAGGGATCGGGATTAAAATTATCCCCAGAGATGAGGATGCCAGGGCTACCCTAT
CAAATGTTGGTCAAAGACAGACAATTCTCCATGATCTATCTATACTGATGGGGGTAAAACTCGATATCGGGGTACAACAA
TTTACTCCCCTGGCCAGGTTAAACCTGGATAATGGGACTTTAAATATTATTATGATTCCCCAGGAACCAGATGAGGAATT
TATAAAAAAAGCTGTAGAAAAAATACCGGTAGTTGAAAGTTCTCAGCGTAAACCATTGAAAAGTAAAATGGGAAGGAAAG
CAGCAGATTAA

Upstream 100 bases:

>100_bases
TTATCTATCTTTACCTTAATGAAGGCAGTTTTGAGGGTGTTATAAGAAGGTTAAAGAGGTTTCTGGGGAGAGAGGTACTT
GATAAAGGAGATAATAAATA

Downstream 100 bases:

>100_bases
TAATATGGGGGTTTGACAATGGGTGAAGATGTAAACTTAAGTAATAATATCCTTGCAGTGATTACCACAAAGGATAAAAG
GGAGATGGTTAGTGGTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MFEYGDLLVTSLLVGSISRGLMLNVDYRQFPSYPHSYVIHLTLGMIASALGALVLPALAEKEYIAVTFLTIGAQQFRDVR
NLERESLARIEETELIPRGKAYIEGIAKLFEARNYLALITSLVTSIIFFYTNIYLAVSGGFLIAYLLHRFMKGPYVSDIA
RVKIVPINFKGKNIGIDDVIIMNVGEEEAFQKWYNEGIGIKIIPRDEDARATLSNVGQRQTILHDLSILMGVKLDIGVQQ
FTPLARLNLDNGTLNIIMIPQEPDEEFIKKAVEKIPVVESSQRKPLKSKMGRKAAD

Sequences:

>Translated_296_residues
MFEYGDLLVTSLLVGSISRGLMLNVDYRQFPSYPHSYVIHLTLGMIASALGALVLPALAEKEYIAVTFLTIGAQQFRDVR
NLERESLARIEETELIPRGKAYIEGIAKLFEARNYLALITSLVTSIIFFYTNIYLAVSGGFLIAYLLHRFMKGPYVSDIA
RVKIVPINFKGKNIGIDDVIIMNVGEEEAFQKWYNEGIGIKIIPRDEDARATLSNVGQRQTILHDLSILMGVKLDIGVQQ
FTPLARLNLDNGTLNIIMIPQEPDEEFIKKAVEKIPVVESSQRKPLKSKMGRKAAD
>Mature_296_residues
MFEYGDLLVTSLLVGSISRGLMLNVDYRQFPSYPHSYVIHLTLGMIASALGALVLPALAEKEYIAVTFLTIGAQQFRDVR
NLERESLARIEETELIPRGKAYIEGIAKLFEARNYLALITSLVTSIIFFYTNIYLAVSGGFLIAYLLHRFMKGPYVSDIA
RVKIVPINFKGKNIGIDDVIIMNVGEEEAFQKWYNEGIGIKIIPRDEDARATLSNVGQRQTILHDLSILMGVKLDIGVQQ
FTPLARLNLDNGTLNIIMIPQEPDEEFIKKAVEKIPVVESSQRKPLKSKMGRKAAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33179; Mature: 33179

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS00019 ACTININ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEYGDLLVTSLLVGSISRGLMLNVDYRQFPSYPHSYVIHLTLGMIASALGALVLPALAE
CCCHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KEYIAVTFLTIGAQQFRDVRNLERESLARIEETELIPRGKAYIEGIAKLFEARNYLALIT
CCEEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SLVTSIIFFYTNIYLAVSGGFLIAYLLHRFMKGPYVSDIARVKIVPINFKGKNIGIDDVI
HHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCEE
IMNVGEEEAFQKWYNEGIGIKIIPRDEDARATLSNVGQRQTILHDLSILMGVKLDIGVQQ
EEECCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCEECCHHH
FTPLARLNLDNGTLNIIMIPQEPDEEFIKKAVEKIPVVESSQRKPLKSKMGRKAAD
CCCHHEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MFEYGDLLVTSLLVGSISRGLMLNVDYRQFPSYPHSYVIHLTLGMIASALGALVLPALAE
CCCHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KEYIAVTFLTIGAQQFRDVRNLERESLARIEETELIPRGKAYIEGIAKLFEARNYLALIT
CCEEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SLVTSIIFFYTNIYLAVSGGFLIAYLLHRFMKGPYVSDIARVKIVPINFKGKNIGIDDVI
HHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCEE
IMNVGEEEAFQKWYNEGIGIKIIPRDEDARATLSNVGQRQTILHDLSILMGVKLDIGVQQ
EEECCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCEECCHHH
FTPLARLNLDNGTLNIIMIPQEPDEEFIKKAVEKIPVVESSQRKPLKSKMGRKAAD
CCCHHEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]