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The map label for this gene is rpmF

Identifier: 220931866

GI number: 220931866

Start: 1113778

End: 1113951

Strand: Direct

Name: rpmF

Synonym: Hore_10230

Alternate gene names: 220931866

Gene position: 1113778-1113951 (Clockwise)

Preceding gene: 220931865

Following gene: 220931867

Centisome position: 43.2

GC content: 41.95

Gene sequence:

>174_bases
ATGGCTGTACCAAAGAGAAGAACTTCCAAGGCACGCAAACGGAAGCGCCGTACCCACTGGAAGTTAAAAAGTCCTAATCT
TGTAGAATGTCCTCAATGCCATGAACTAAAACTTTCTCACAGGGTATGTCCTTCCTGTGGTTATTACAAGGGAAGAGAAG
TTGTAAGTAAATAA

Upstream 100 bases:

>100_bases
CATAGACCCTAGACTGGCTAAATTAAAAGAGTTTTATGATAAACAATAAGTTTTATTATTTAATCAAATAATGTATTATT
TAGTTAAGGAGGTGTAGTAA

Downstream 100 bases:

>100_bases
ACTTACTATAAATAGGTGGAGCTATTCCACCTATTTTTTAATTTAACTTAAAAGAGGAGATAATATTTTTTTAGTAAATT
TTTATTATTATTGGGTGACA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAVPKRRTSKARKRKRRTHWKLKSPNLVECPQCHELKLSHRVCPSCGYYKGREVVSK

Sequences:

>Translated_57_residues
MAVPKRRTSKARKRKRRTHWKLKSPNLVECPQCHELKLSHRVCPSCGYYKGREVVSK
>Mature_56_residues
AVPKRRTSKARKRKRRTHWKLKSPNLVECPQCHELKLSHRVCPSCGYYKGREVVSK

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_HALOH (B8CWW0)

Other databases:

- EMBL:   CP001098
- RefSeq:   YP_002508774.1
- ProteinModelPortal:   B8CWW0
- SMR:   B8CWW0
- GeneID:   7314611
- GenomeReviews:   CP001098_GR
- KEGG:   hor:Hore_10230
- HOGENOM:   HBG728381
- OMA:   HRACRHC
- ProtClustDB:   CLSK2806357
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6749; Mature: 6618

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRTSKARKRKRRTHWKLKSPNLVECPQCHELKLSHRVCPSCGYYKGREVVSK
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure 
AVPKRRTSKARKRKRRTHWKLKSPNLVECPQCHELKLSHRVCPSCGYYKGREVVSK
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA