Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is pdxK [C]
Identifier: 220931256
GI number: 220931256
Start: 422970
End: 423842
Strand: Reverse
Name: pdxK [C]
Synonym: Hore_04110
Alternate gene names: 220931256
Gene position: 423842-422970 (Counterclockwise)
Preceding gene: 220931260
Following gene: 220931242
Centisome position: 16.44
GC content: 44.56
Gene sequence:
>873_bases ATGCAACTTCCCGTACCCCGGGTCGCCGCCATACATGATTTATCAGGTTTTGGAAGGGCTTCACTAACTGTCATTATACC TATTCTCTCAACCCTTGGTATTCAGGTCTGCCCTGTTCCTACCGCTATTCTATCCACCCATACCGGAGGTTTTAAAGACT ATAAATATATAGACTTAACAGAACACCTGGAGGACTATATTAACCACTGGGACAAACTAAACATTAAATTTGACGGTATC TACAGTGGGTTTCTGGGTTCTCCTGATCAGATCTCCATTGTCTCCAATTTTATTGAAAAATTCCAGGGTGATAACCAGCT GATTGTTATTGATCCGGTCATGGGAGATAATGGCCAGACTTACGGACCAATGAATGGCAGAATGATACAGGAAATGAAGG GCCTGATTTGCCAGGCTGATGTTATTACCCCCAATATGACCGAAGCTGCTTTTTTACTTGATGAAAATTATCCAGAAACC ATCAGTGAAGAAAAAATCAAAACATACCTGGTTGACCTCTCACAAAAAGGCCCCCGCATAGTCATTATAACCAGTGTCCC CTTTGAGGGTATTAAAGGTAAAACCTCAGTAGTGGCCTATAACCGGGATGATGGTAGATTCTGGAAAGTAGACTGTGATT ATGTTCCCACCCATTTCCCGGGTACCGGGGATGCTTTTACAAGTGTGGTAGTCGGCAGTATGCTCCAGGGGGATAGCCTC CCCCTGGCCCTGGACAGGGCTGTCCAGTTTGTATCCACCGCCATTAGAACAACCTATGGCTATAACTATGCCAACCGGGA AGGTGTAATGCTGGAACGGGTTCTGGAAAATCTTAAAGCCCCCGCCCTTTCCCATAGTTATGAAATATTTTAA
Upstream 100 bases:
>100_bases GACGAAATTACAGGATTAATCAAAGGAAAAAAACATCCTATGATGAATTATAAAGTTAACAAAAAATATAACCACAAAAT ATCATAAGGAGGATTTCAAT
Downstream 100 bases:
>100_bases AAACAGGGCCAGAATTAACTGGCCCTTCCTGTGTTTGGAGTTATAGTATAATACTTCAACAGTTATTGCAAACTTCCTTT ATTTTAGAACAAATTGGCCT
Product: pyridoxamine kinase
Products: ADP; pyridoxal 5'-phosphate
Alternate protein names: Pyridoxamine Kinase; Pyridoxine Kinase; Pyridoxal/Pyridoxine/Pyridoxamine Kinase; Pyridoxine Kinase Family Protein; Phosphomethylpyrimidine Kinase; Pyridoxal Kinase-Like Protein; Pyridoxal/Pyridoxine/Pyridoxamine Kinase-Like Protein; Pyridoxamine Kinase PdxY; Pyridoxal Kinase Related Protein
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MQLPVPRVAAIHDLSGFGRASLTVIIPILSTLGIQVCPVPTAILSTHTGGFKDYKYIDLTEHLEDYINHWDKLNIKFDGI YSGFLGSPDQISIVSNFIEKFQGDNQLIVIDPVMGDNGQTYGPMNGRMIQEMKGLICQADVITPNMTEAAFLLDENYPET ISEEKIKTYLVDLSQKGPRIVIITSVPFEGIKGKTSVVAYNRDDGRFWKVDCDYVPTHFPGTGDAFTSVVVGSMLQGDSL PLALDRAVQFVSTAIRTTYGYNYANREGVMLERVLENLKAPALSHSYEIF
Sequences:
>Translated_290_residues MQLPVPRVAAIHDLSGFGRASLTVIIPILSTLGIQVCPVPTAILSTHTGGFKDYKYIDLTEHLEDYINHWDKLNIKFDGI YSGFLGSPDQISIVSNFIEKFQGDNQLIVIDPVMGDNGQTYGPMNGRMIQEMKGLICQADVITPNMTEAAFLLDENYPET ISEEKIKTYLVDLSQKGPRIVIITSVPFEGIKGKTSVVAYNRDDGRFWKVDCDYVPTHFPGTGDAFTSVVVGSMLQGDSL PLALDRAVQFVSTAIRTTYGYNYANREGVMLERVLENLKAPALSHSYEIF >Mature_290_residues MQLPVPRVAAIHDLSGFGRASLTVIIPILSTLGIQVCPVPTAILSTHTGGFKDYKYIDLTEHLEDYINHWDKLNIKFDGI YSGFLGSPDQISIVSNFIEKFQGDNQLIVIDPVMGDNGQTYGPMNGRMIQEMKGLICQADVITPNMTEAAFLLDENYPET ISEEKIKTYLVDLSQKGPRIVIITSVPFEGIKGKTSVVAYNRDDGRFWKVDCDYVPTHFPGTGDAFTSVVVGSMLQGDSL PLALDRAVQFVSTAIRTTYGYNYANREGVMLERVLENLKAPALSHSYEIF
Specific function: Phosphorylates B6 Vitamers; Functions In A Salvage Pathway. Uses Pyridoxal, Pyridoxine, And Pyridoxamine As Substrates. [C]
COG id: COG2240
COG function: function code H; Pyridoxal/pyridoxine/pyridoxamine kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.35
Molecular weight: Translated: 32139; Mature: 32139
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPVPRVAAIHDLSGFGRASLTVIIPILSTLGIQVCPVPTAILSTHTGGFKDYKYIDLT CCCCCCCHHHHHCCCCCCCCHHHHHEEHHHHCCEEECCCCHHHHHCCCCCCCCCEEEEHH EHLEDYINHWDKLNIKFDGIYSGFLGSPDQISIVSNFIEKFQGDNQLIVIDPVMGDNGQT HHHHHHHHHHHEEEEEECCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCE YGPMNGRMIQEMKGLICQADVITPNMTEAAFLLDENYPETISEEKIKTYLVDLSQKGPRI ECCCCCHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHEEECCCCCCEE VIITSVPFEGIKGKTSVVAYNRDDGRFWKVDCDYVPTHFPGTGDAFTSVVVGSMLQGDSL EEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC PLALDRAVQFVSTAIRTTYGYNYANREGVMLERVLENLKAPALSHSYEIF CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEECC >Mature Secondary Structure MQLPVPRVAAIHDLSGFGRASLTVIIPILSTLGIQVCPVPTAILSTHTGGFKDYKYIDLT CCCCCCCHHHHHCCCCCCCCHHHHHEEHHHHCCEEECCCCHHHHHCCCCCCCCCEEEEHH EHLEDYINHWDKLNIKFDGIYSGFLGSPDQISIVSNFIEKFQGDNQLIVIDPVMGDNGQT HHHHHHHHHHHEEEEEECCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCE YGPMNGRMIQEMKGLICQADVITPNMTEAAFLLDENYPETISEEKIKTYLVDLSQKGPRI ECCCCCHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHEEECCCCCCEE VIITSVPFEGIKGKTSVVAYNRDDGRFWKVDCDYVPTHFPGTGDAFTSVVVGSMLQGDSL EEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC PLALDRAVQFVSTAIRTTYGYNYANREGVMLERVLENLKAPALSHSYEIF CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; pyridoxal
Specific reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA