Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is pdxK [C]

Identifier: 220931256

GI number: 220931256

Start: 422970

End: 423842

Strand: Reverse

Name: pdxK [C]

Synonym: Hore_04110

Alternate gene names: 220931256

Gene position: 423842-422970 (Counterclockwise)

Preceding gene: 220931260

Following gene: 220931242

Centisome position: 16.44

GC content: 44.56

Gene sequence:

>873_bases
ATGCAACTTCCCGTACCCCGGGTCGCCGCCATACATGATTTATCAGGTTTTGGAAGGGCTTCACTAACTGTCATTATACC
TATTCTCTCAACCCTTGGTATTCAGGTCTGCCCTGTTCCTACCGCTATTCTATCCACCCATACCGGAGGTTTTAAAGACT
ATAAATATATAGACTTAACAGAACACCTGGAGGACTATATTAACCACTGGGACAAACTAAACATTAAATTTGACGGTATC
TACAGTGGGTTTCTGGGTTCTCCTGATCAGATCTCCATTGTCTCCAATTTTATTGAAAAATTCCAGGGTGATAACCAGCT
GATTGTTATTGATCCGGTCATGGGAGATAATGGCCAGACTTACGGACCAATGAATGGCAGAATGATACAGGAAATGAAGG
GCCTGATTTGCCAGGCTGATGTTATTACCCCCAATATGACCGAAGCTGCTTTTTTACTTGATGAAAATTATCCAGAAACC
ATCAGTGAAGAAAAAATCAAAACATACCTGGTTGACCTCTCACAAAAAGGCCCCCGCATAGTCATTATAACCAGTGTCCC
CTTTGAGGGTATTAAAGGTAAAACCTCAGTAGTGGCCTATAACCGGGATGATGGTAGATTCTGGAAAGTAGACTGTGATT
ATGTTCCCACCCATTTCCCGGGTACCGGGGATGCTTTTACAAGTGTGGTAGTCGGCAGTATGCTCCAGGGGGATAGCCTC
CCCCTGGCCCTGGACAGGGCTGTCCAGTTTGTATCCACCGCCATTAGAACAACCTATGGCTATAACTATGCCAACCGGGA
AGGTGTAATGCTGGAACGGGTTCTGGAAAATCTTAAAGCCCCCGCCCTTTCCCATAGTTATGAAATATTTTAA

Upstream 100 bases:

>100_bases
GACGAAATTACAGGATTAATCAAAGGAAAAAAACATCCTATGATGAATTATAAAGTTAACAAAAAATATAACCACAAAAT
ATCATAAGGAGGATTTCAAT

Downstream 100 bases:

>100_bases
AAACAGGGCCAGAATTAACTGGCCCTTCCTGTGTTTGGAGTTATAGTATAATACTTCAACAGTTATTGCAAACTTCCTTT
ATTTTAGAACAAATTGGCCT

Product: pyridoxamine kinase

Products: ADP; pyridoxal 5'-phosphate

Alternate protein names: Pyridoxamine Kinase; Pyridoxine Kinase; Pyridoxal/Pyridoxine/Pyridoxamine Kinase; Pyridoxine Kinase Family Protein; Phosphomethylpyrimidine Kinase; Pyridoxal Kinase-Like Protein; Pyridoxal/Pyridoxine/Pyridoxamine Kinase-Like Protein; Pyridoxamine Kinase PdxY; Pyridoxal Kinase Related Protein

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MQLPVPRVAAIHDLSGFGRASLTVIIPILSTLGIQVCPVPTAILSTHTGGFKDYKYIDLTEHLEDYINHWDKLNIKFDGI
YSGFLGSPDQISIVSNFIEKFQGDNQLIVIDPVMGDNGQTYGPMNGRMIQEMKGLICQADVITPNMTEAAFLLDENYPET
ISEEKIKTYLVDLSQKGPRIVIITSVPFEGIKGKTSVVAYNRDDGRFWKVDCDYVPTHFPGTGDAFTSVVVGSMLQGDSL
PLALDRAVQFVSTAIRTTYGYNYANREGVMLERVLENLKAPALSHSYEIF

Sequences:

>Translated_290_residues
MQLPVPRVAAIHDLSGFGRASLTVIIPILSTLGIQVCPVPTAILSTHTGGFKDYKYIDLTEHLEDYINHWDKLNIKFDGI
YSGFLGSPDQISIVSNFIEKFQGDNQLIVIDPVMGDNGQTYGPMNGRMIQEMKGLICQADVITPNMTEAAFLLDENYPET
ISEEKIKTYLVDLSQKGPRIVIITSVPFEGIKGKTSVVAYNRDDGRFWKVDCDYVPTHFPGTGDAFTSVVVGSMLQGDSL
PLALDRAVQFVSTAIRTTYGYNYANREGVMLERVLENLKAPALSHSYEIF
>Mature_290_residues
MQLPVPRVAAIHDLSGFGRASLTVIIPILSTLGIQVCPVPTAILSTHTGGFKDYKYIDLTEHLEDYINHWDKLNIKFDGI
YSGFLGSPDQISIVSNFIEKFQGDNQLIVIDPVMGDNGQTYGPMNGRMIQEMKGLICQADVITPNMTEAAFLLDENYPET
ISEEKIKTYLVDLSQKGPRIVIITSVPFEGIKGKTSVVAYNRDDGRFWKVDCDYVPTHFPGTGDAFTSVVVGSMLQGDSL
PLALDRAVQFVSTAIRTTYGYNYANREGVMLERVLENLKAPALSHSYEIF

Specific function: Phosphorylates B6 Vitamers; Functions In A Salvage Pathway. Uses Pyridoxal, Pyridoxine, And Pyridoxamine As Substrates. [C]

COG id: COG2240

COG function: function code H; Pyridoxal/pyridoxine/pyridoxamine kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.35

Molecular weight: Translated: 32139; Mature: 32139

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPVPRVAAIHDLSGFGRASLTVIIPILSTLGIQVCPVPTAILSTHTGGFKDYKYIDLT
CCCCCCCHHHHHCCCCCCCCHHHHHEEHHHHCCEEECCCCHHHHHCCCCCCCCCEEEEHH
EHLEDYINHWDKLNIKFDGIYSGFLGSPDQISIVSNFIEKFQGDNQLIVIDPVMGDNGQT
HHHHHHHHHHHEEEEEECCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCE
YGPMNGRMIQEMKGLICQADVITPNMTEAAFLLDENYPETISEEKIKTYLVDLSQKGPRI
ECCCCCHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHEEECCCCCCEE
VIITSVPFEGIKGKTSVVAYNRDDGRFWKVDCDYVPTHFPGTGDAFTSVVVGSMLQGDSL
EEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PLALDRAVQFVSTAIRTTYGYNYANREGVMLERVLENLKAPALSHSYEIF
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEECC
>Mature Secondary Structure
MQLPVPRVAAIHDLSGFGRASLTVIIPILSTLGIQVCPVPTAILSTHTGGFKDYKYIDLT
CCCCCCCHHHHHCCCCCCCCHHHHHEEHHHHCCEEECCCCHHHHHCCCCCCCCCEEEEHH
EHLEDYINHWDKLNIKFDGIYSGFLGSPDQISIVSNFIEKFQGDNQLIVIDPVMGDNGQT
HHHHHHHHHHHEEEEEECCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCE
YGPMNGRMIQEMKGLICQADVITPNMTEAAFLLDENYPETISEEKIKTYLVDLSQKGPRI
ECCCCCHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHEEECCCCCCEE
VIITSVPFEGIKGKTSVVAYNRDDGRFWKVDCDYVPTHFPGTGDAFTSVVVGSMLQGDSL
EEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PLALDRAVQFVSTAIRTTYGYNYANREGVMLERVLENLKAPALSHSYEIF
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; pyridoxal

Specific reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA