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The map label for this gene is grpB [H]

Identifier: 220931112

GI number: 220931112

Start: 269277

End: 269753

Strand: Direct

Name: grpB [H]

Synonym: Hore_02640

Alternate gene names: 220931112

Gene position: 269277-269753 (Clockwise)

Preceding gene: 220931111

Following gene: 220931113

Centisome position: 10.44

GC content: 27.88

Gene sequence:

>477_bases
ATGGAATTTAAAAAGATTAAAAATAAGATTTTAAAATATATAGGAAATTTAATTTTGAGTGTTGAACATGTGGGTAGTAC
ATCTGTAGAAGGATTAGCTGCTAAACCAATAATAGATATAGATGTTGTAATAGAAGATATGTCCGTTTTACCAGATATTA
TTAAAGGTTTAGAAAAAGCAGGGTATGAATATGAAGGTAATTTAGGAATAGAAGGCAGGGAAGCATTTAGAAGAATAAAA
AAAGATGGATTGATGAAACATCATTTATATGTTTGTCCTAAAGATGGTAAAGGTTATTTAGAGCATATAGCCTTAAGAGA
CTACCTTAGAGAAAATAAAGATGCCAGAAGAGAGTATGAAGAGCTTAAGTTAAAATTAGCAAGGAAATATAGAAATGATG
TTGATACTTATTGTATTAAAAAAACTGACTTTATAAACAGTATCCTGAGTAAAACAATTTATAAAAAGCAGGACTAA

Upstream 100 bases:

>100_bases
TATAATATATGGGTTGTATAAAGTTTATAAAAGGAGGTGATACATAATTCCTGAAAAAACAAAAGTTGTTAAAGTTGTAC
CGTATAACCCTGATTGGAAA

Downstream 100 bases:

>100_bases
AACTATAAAGTGTTTTTGATGTTTATTATTCATATATTTAAAGGGATTGGAAATTCAATAAACATAAAGGAGTGTGGATT
ATTAAATGAAATATAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MEFKKIKNKILKYIGNLILSVEHVGSTSVEGLAAKPIIDIDVVIEDMSVLPDIIKGLEKAGYEYEGNLGIEGREAFRRIK
KDGLMKHHLYVCPKDGKGYLEHIALRDYLRENKDARREYEELKLKLARKYRNDVDTYCIKKTDFINSILSKTIYKKQD

Sequences:

>Translated_158_residues
MEFKKIKNKILKYIGNLILSVEHVGSTSVEGLAAKPIIDIDVVIEDMSVLPDIIKGLEKAGYEYEGNLGIEGREAFRRIK
KDGLMKHHLYVCPKDGKGYLEHIALRDYLRENKDARREYEELKLKLARKYRNDVDTYCIKKTDFINSILSKTIYKKQD
>Mature_158_residues
MEFKKIKNKILKYIGNLILSVEHVGSTSVEGLAAKPIIDIDVVIEDMSVLPDIIKGLEKAGYEYEGNLGIEGREAFRRIK
KDGLMKHHLYVCPKDGKGYLEHIALRDYLRENKDARREYEELKLKLARKYRNDVDTYCIKKTDFINSILSKTIYKKQD

Specific function: Unknown

COG id: COG2320

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0157 (GrpB) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007344 [H]

Pfam domain/function: PF04229 UPF0157 [H]

EC number: NA

Molecular weight: Translated: 18338; Mature: 18338

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKKIKNKILKYIGNLILSVEHVGSTSVEGLAAKPIIDIDVVIEDMSVLPDIIKGLEKA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GYEYEGNLGIEGREAFRRIKKDGLMKHHLYVCPKDGKGYLEHIALRDYLRENKDARREYE
CCCCCCCCCCCHHHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHH
ELKLKLARKYRNDVDTYCIKKTDFINSILSKTIYKKQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEFKKIKNKILKYIGNLILSVEHVGSTSVEGLAAKPIIDIDVVIEDMSVLPDIIKGLEKA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GYEYEGNLGIEGREAFRRIKKDGLMKHHLYVCPKDGKGYLEHIALRDYLRENKDARREYE
CCCCCCCCCCCHHHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHH
ELKLKLARKYRNDVDTYCIKKTDFINSILSKTIYKKQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8626304 [H]