| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yjgN [H]
Identifier: 220918774
GI number: 220918774
Start: 4104261
End: 4105448
Strand: Direct
Name: yjgN [H]
Synonym: A2cp1_3685
Alternate gene names: 220918774
Gene position: 4104261-4105448 (Clockwise)
Preceding gene: 220918771
Following gene: 220918775
Centisome position: 81.61
GC content: 71.21
Gene sequence:
>1188_bases ATGACCGAGTTCGCCGCGTCGATGCCCGCAGCACCGGCCGATGCCTTCCCGACCGGGTCTGCACCGCGGCCCCAGCCGCT GCCGATCCGGTTCACCGGGTCGGGCGGAGAGTACTTCCGGATCTGGATCGTCAACCTGCTCCTCACCCTCGTGACCCTCG GGGTCTGGTCCGCGTGGGCGAAGGTCCGCAAGACGCGCTACTTCTGGAGCAACACGCAGGTCGCCGGCGCGGCGTTCCAG TACCACGGGAACCCCGGCGCGATCCTGCGCGGCCGGCTGCTCGCCGGTGCCGTCTTCCTCGCGTACTCGGTGGCCGGGCG CATCTCGGTCGCCGCGGGGCTGGTGGCCGGCGTGGTGCTCGTGCTGCTCGGCCCCTGGCTCTTCCACGCGTCCATGCGCT TCAAGCTCGCGAACACGAGCTGGCGGGGGCTGCGGTTCGGGTTCGACTCCACCGCCGGGCGGGCGTACGCGGTGTTCGCG CCGGGCATGGTTCTCGGGGTGCTCTTCATCGGCGCGCTCGCAACGATCCAGCGGATCGCGCCCGGCGAGCAGGCGAACCC CTTGCCGTTCGTCGTCGCAGAGTTCGCGCTGTTCGCTTTCTGGCCCTGGCTGCATGCGCGGCTGAAGGCGTACCAGCACG GCCGCGCGCAGTACGGGAACCTCGCGTTCGAGTTCGAGCCGTCCACCCGCGCGTTCTACGGCGTCTACGGCAAGGCCTTT CTCTTCACGCTGCCCTTCCTCCTGCTGCTGGGGATCGTCATCGGCGGCATCGGCCTCGCCGCGCGTGGCGGCAACGACCC GGGGACGATGACGCGCGCGCTCGTCCCGATCATGGTCGCCACCTACGCCGTGCTCGGCCTCTCGTACGCCGTCGTCGGCG CGATCTTCACCGCACGCCTGCAGCGGCTCGTCTGGACCCGGACGCACGCGGGCCCGGTGCGCTTCGCGACGAGCATCACG GCGCGCGGCCTCATGCGCGTCTGGATCGTCAACGGGGTCCTGACGCTCCTCACGCTCGGCGTGTACTGGCCGTGGGCCGC GGTGGCGATCGCGCGCTACCGGCTCGAGTGCATGACGCTCGAGGCCGGGGCGCCGCTCGAGACCATCGCGGCGGGGAGAC TGGCAACGGAAGGCTCCGCGACGGGCGAGGGCGCGGTCGATCTGTTCGGGTGGGACATCGGCCTGTGA
Upstream 100 bases:
>100_bases TGAGTGAAGTTCCCCGTAGGCTTCGTACGACTCTCCGTGATAACGCTGTGGGCTCCGCGTCGGCGGCCGCCCTGGCCCGC GGCGGATCGAGGGACCACCC
Downstream 100 bases:
>100_bases GCGAGACCGTCCTCGAAGGCCTCCTCTTCGACGGACGAAGCGCCGCCGCGACGCCGGTCCGGATCGCGATCGCCGGGGGC GTCCTCACGGTCACGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTEFAASMPAAPADAFPTGSAPRPQPLPIRFTGSGGEYFRIWIVNLLLTLVTLGVWSAWAKVRKTRYFWSNTQVAGAAFQ YHGNPGAILRGRLLAGAVFLAYSVAGRISVAAGLVAGVVLVLLGPWLFHASMRFKLANTSWRGLRFGFDSTAGRAYAVFA PGMVLGVLFIGALATIQRIAPGEQANPLPFVVAEFALFAFWPWLHARLKAYQHGRAQYGNLAFEFEPSTRAFYGVYGKAF LFTLPFLLLLGIVIGGIGLAARGGNDPGTMTRALVPIMVATYAVLGLSYAVVGAIFTARLQRLVWTRTHAGPVRFATSIT ARGLMRVWIVNGVLTLLTLGVYWPWAAVAIARYRLECMTLEAGAPLETIAAGRLATEGSATGEGAVDLFGWDIGL
Sequences:
>Translated_395_residues MTEFAASMPAAPADAFPTGSAPRPQPLPIRFTGSGGEYFRIWIVNLLLTLVTLGVWSAWAKVRKTRYFWSNTQVAGAAFQ YHGNPGAILRGRLLAGAVFLAYSVAGRISVAAGLVAGVVLVLLGPWLFHASMRFKLANTSWRGLRFGFDSTAGRAYAVFA PGMVLGVLFIGALATIQRIAPGEQANPLPFVVAEFALFAFWPWLHARLKAYQHGRAQYGNLAFEFEPSTRAFYGVYGKAF LFTLPFLLLLGIVIGGIGLAARGGNDPGTMTRALVPIMVATYAVLGLSYAVVGAIFTARLQRLVWTRTHAGPVRFATSIT ARGLMRVWIVNGVLTLLTLGVYWPWAAVAIARYRLECMTLEAGAPLETIAAGRLATEGSATGEGAVDLFGWDIGL >Mature_394_residues TEFAASMPAAPADAFPTGSAPRPQPLPIRFTGSGGEYFRIWIVNLLLTLVTLGVWSAWAKVRKTRYFWSNTQVAGAAFQY HGNPGAILRGRLLAGAVFLAYSVAGRISVAAGLVAGVVLVLLGPWLFHASMRFKLANTSWRGLRFGFDSTAGRAYAVFAP GMVLGVLFIGALATIQRIAPGEQANPLPFVVAEFALFAFWPWLHARLKAYQHGRAQYGNLAFEFEPSTRAFYGVYGKAFL FTLPFLLLLGIVIGGIGLAARGGNDPGTMTRALVPIMVATYAVLGLSYAVVGAIFTARLQRLVWTRTHAGPVRFATSITA RGLMRVWIVNGVLTLLTLGVYWPWAAVAIARYRLECMTLEAGAPLETIAAGRLATEGSATGEGAVDLFGWDIGL
Specific function: Unknown
COG id: COG4269
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010295 [H]
Pfam domain/function: PF05987 DUF898 [H]
EC number: NA
Molecular weight: Translated: 42448; Mature: 42317
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFAASMPAAPADAFPTGSAPRPQPLPIRFTGSGGEYFRIWIVNLLLTLVTLGVWSAWA CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH KVRKTRYFWSNTQVAGAAFQYHGNPGAILRGRLLAGAVFLAYSVAGRISVAAGLVAGVVL HHHHHHEEECCCCEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLGPWLFHASMRFKLANTSWRGLRFGFDSTAGRAYAVFAPGMVLGVLFIGALATIQRIA HHHHHHHHHHHHEEEEECCCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC PGEQANPLPFVVAEFALFAFWPWLHARLKAYQHGRAQYGNLAFEFEPSTRAFYGVYGKAF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEHHHHHHHH LFTLPFLLLLGIVIGGIGLAARGGNDPGTMTRALVPIMVATYAVLGLSYAVVGAIFTARL HHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLVWTRTHAGPVRFATSITARGLMRVWIVNGVLTLLTLGVYWPWAAVAIARYRLECMTL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE EAGAPLETIAAGRLATEGSATGEGAVDLFGWDIGL CCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure TEFAASMPAAPADAFPTGSAPRPQPLPIRFTGSGGEYFRIWIVNLLLTLVTLGVWSAWA CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH KVRKTRYFWSNTQVAGAAFQYHGNPGAILRGRLLAGAVFLAYSVAGRISVAAGLVAGVVL HHHHHHEEECCCCEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLGPWLFHASMRFKLANTSWRGLRFGFDSTAGRAYAVFAPGMVLGVLFIGALATIQRIA HHHHHHHHHHHHEEEEECCCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC PGEQANPLPFVVAEFALFAFWPWLHARLKAYQHGRAQYGNLAFEFEPSTRAFYGVYGKAF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEHHHHHHHH LFTLPFLLLLGIVIGGIGLAARGGNDPGTMTRALVPIMVATYAVLGLSYAVVGAIFTARL HHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRLVWTRTHAGPVRFATSITARGLMRVWIVNGVLTLLTLGVYWPWAAVAIARYRLECMTL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE EAGAPLETIAAGRLATEGSATGEGAVDLFGWDIGL CCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 8253666 [H]