| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918681
Identifier: 220918681
GI number: 220918681
Start: 4007885
End: 4008556
Strand: Direct
Name: 220918681
Synonym: A2cp1_3589
Alternate gene names: NA
Gene position: 4007885-4008556 (Clockwise)
Preceding gene: 220918679
Following gene: 220918682
Centisome position: 79.69
GC content: 76.93
Gene sequence:
>672_bases ATGGGCGTCCCCTTCACCTCGCAGCAGCTCCTGGACGCGTTCGAGCAGTTCAACCGCGCGATCTGGCCCATGCCGCTCGT CGCCTACGCGCTCGCGCTCCTCGCGCTGGTGCTCGCGGTGCGCGGCGGGCGGGGCGCCAGCGCCGCGACCGCGCTCGTGC TCGCGTTCCTGTGGGCCGCGGCGGCCGCCTTCCACGCGAGCGCCCTCGCGCGCGTGTCCTCGCTCGCGCCGGCGTTCGCC GCGGCGTTCGTGGTGCAGGCGGTGCTGTTCGCGATGGCCTCGGCGCGCGGCTGGCTGTCGTTCCACGCCCGGCCCGGCGG GCTCACCACCGCCGGCCTGTCGCTCATGCTCTACGCGGCGGCCGTCTACCCGCTCGTCGGCGCGCTCGCCGGGCACGCCT ACCCGCGCGCGCCCGCGTTCGGCGTCACGCCCTGCCCGAACACGATGTTCACGCTCGGGCTCCTGCTGCTCACCGACCGC CCGGTGCCGCGCCGCCTGCTGGTGATCCCGTTCCTGTGGTCGCTCGTGGGCATCCCGGCCGCGCTCGACCTGGGCATGAC CGAGGACCTCCCGCTGCCGTTCACCGGCGTGCTCGCCACCGGCCTGCTGCTCGGCCGCGATCGCCCGCGGGTCCACCGCC GCCCCGCGGCCGGGGGCGCGGGCGCGCGTTGA
Upstream 100 bases:
>100_bases TCCGCCGGTCCCACCGGACCGCCCACGATCGGGTCGCCACGCCGAGGGCGCTCGACGCCGCCGCGCGGCGGTGCGCCTGC TGGGGAGCCGGAGGTGGCCC
Downstream 100 bases:
>100_bases CCGGCGCGAACGCCGCGTGCTTCCATCCGGCCATGCTCACGCACAAGACGTTCTTCGAGGGTCAGGTCCAGAGCATCGGG TTCGAGCGCAACGGCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MGVPFTSQQLLDAFEQFNRAIWPMPLVAYALALLALVLAVRGGRGASAATALVLAFLWAAAAAFHASALARVSSLAPAFA AAFVVQAVLFAMASARGWLSFHARPGGLTTAGLSLMLYAAAVYPLVGALAGHAYPRAPAFGVTPCPNTMFTLGLLLLTDR PVPRRLLVIPFLWSLVGIPAALDLGMTEDLPLPFTGVLATGLLLGRDRPRVHRRPAAGGAGAR
Sequences:
>Translated_223_residues MGVPFTSQQLLDAFEQFNRAIWPMPLVAYALALLALVLAVRGGRGASAATALVLAFLWAAAAAFHASALARVSSLAPAFA AAFVVQAVLFAMASARGWLSFHARPGGLTTAGLSLMLYAAAVYPLVGALAGHAYPRAPAFGVTPCPNTMFTLGLLLLTDR PVPRRLLVIPFLWSLVGIPAALDLGMTEDLPLPFTGVLATGLLLGRDRPRVHRRPAAGGAGAR >Mature_222_residues GVPFTSQQLLDAFEQFNRAIWPMPLVAYALALLALVLAVRGGRGASAATALVLAFLWAAAAAFHASALARVSSLAPAFAA AFVVQAVLFAMASARGWLSFHARPGGLTTAGLSLMLYAAAVYPLVGALAGHAYPRAPAFGVTPCPNTMFTLGLLLLTDRP VPRRLLVIPFLWSLVGIPAALDLGMTEDLPLPFTGVLATGLLLGRDRPRVHRRPAAGGAGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23221; Mature: 23090
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVPFTSQQLLDAFEQFNRAIWPMPLVAYALALLALVLAVRGGRGASAATALVLAFLWAA CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAAFHASALARVSSLAPAFAAAFVVQAVLFAMASARGWLSFHARPGGLTTAGLSLMLYAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHH AVYPLVGALAGHAYPRAPAFGVTPCPNTMFTLGLLLLTDRPVPRRLLVIPFLWSLVGIPA HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH ALDLGMTEDLPLPFTGVLATGLLLGRDRPRVHRRPAAGGAGAR HHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure GVPFTSQQLLDAFEQFNRAIWPMPLVAYALALLALVLAVRGGRGASAATALVLAFLWAA CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAAFHASALARVSSLAPAFAAAFVVQAVLFAMASARGWLSFHARPGGLTTAGLSLMLYAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHH AVYPLVGALAGHAYPRAPAFGVTPCPNTMFTLGLLLLTDRPVPRRLLVIPFLWSLVGIPA HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH ALDLGMTEDLPLPFTGVLATGLLLGRDRPRVHRRPAAGGAGAR HHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA