| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918432
Identifier: 220918432
GI number: 220918432
Start: 3714454
End: 3715692
Strand: Direct
Name: 220918432
Synonym: A2cp1_3336
Alternate gene names: NA
Gene position: 3714454-3715692 (Clockwise)
Preceding gene: 220918431
Following gene: 220918435
Centisome position: 73.86
GC content: 77.8
Gene sequence:
>1239_bases ATGGGACACGTGTTGCTTCGATCGCCGTCGCGCCATGCGCTGCTCACCTCGCTCCTGCTCGCCGCCTGCGGAGGAGGAGG CTACGGCGGAGGGGGCGGAGGCGGAGGAGGTGGCGGCTACGGTGACGGCGGCGGCGGTGGGGGCGGAGGTGGCAGCGGCG ACGCGGGGCTCGCCGCGCTGTGGGTGGTCCCCGAGTCCGCGCCGGCGCTGAGCGCCGCCGGGCAGGCTGGGTTCACGGCC GGAGAGCTGTTCTGCAACGCGCACACCGCCGCCCACGCGGGCGGCGAGATCCGCGGCCAGCTCGACCTGGGCGGCCCGCT GCGCATCGCCACGCTGGACGGCGCGCAGGAGACGCCGCCGGTCGTCACGAACGCGTTCGGCGCCGCGGCGTTCACGGTCG ACCCCGGCACGCTCCGCATGCGCGGCGTGGTGGTGACCTCGGGGGTCCCCACCGCGAACGCCGCCCACGTGCACCTCGGG GCGCGCGACGCGCCGGGCGAGATCATCGTCCCGCTGGCCGGCGGCCCCGAGGTGTGGGTGGTGCCGGACGGCGCCCCGCC GCTCACCACGGCCCAGCGCGAGGCGTTCGAGGCAGGCACGCTGTTCGTGAACGTCCACACCCCCGCCCACGCCGGCGGCG AGATCCGCGGCCAGCTCGACCACCGCGGCACCGCGCGGCTCGCGGCGCTGGATGGCGCGCAGGAGGTCCCCGCCACCGGC TCGAGCGGCTTCGGCGCGGGTCTGCTCGTGGTGGACGACGCGACCGGCCGGCCGGGGGGCTTCGTGATCTCCCGGAGGCT CACCGCCGAGTCCGCCGCGCACGTGCACCAGGCGGCGAGGGGCACCTCCGGCGGCATCATCGTCCCGCTGTTCGGGCGGC CCGGGCTGTGGGTGGTGCGCGACGACGCGGAGCCGCTCACCGCGGAGCAGCGGACCGCCTTCGACGCGGGCGGCCTGTAC TACAACGTGCACACGACCGCCAACCCGGCCGGCGAGATCCGCGGCCAGCTCGGGCGCGGCGGCCCGCTCCGCATCGCCTC GCTGGACGGCGCGCAGGAGACACCGCCGGTGACGTCCGCCGGCTTCGGGGCCGGGCTGCTCGCGCTCGACGACGGCGGCG GCGGCGAGGTGGGCGGGTTCGTGGTCGCGGCCGGCCTCACCGGCGCGACCGCCGCCCACGTGCACCAGGGCGCGCGCGGC GCCCCCGGGGACATCCTGGTGCCGCTCTCCGGTCCCTGA
Upstream 100 bases:
>100_bases CCTAGTCCGCGGGCCCGCCGCCCCAAGGCGGTGCGTCACCCCGCGCGAACGATGGGTGTCACTCCCGGCGGCCGTTCTCG CGCCAGGGAGGACTCGATCC
Downstream 100 bases:
>100_bases GGCGCAGGGTTCACGCCGGGACGTGCACCGTCACCGCCAGGGCATCGGCGGTGACGTCGTACGTTCCGAGCGGGCGCGTG GCCGGTCCGTGCTGCACGGC
Product: CHRD domain containing protein
Products: NA
Alternate protein names: CHRD Domain Containing Protein
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MGHVLLRSPSRHALLTSLLLAACGGGGYGGGGGGGGGGGYGDGGGGGGGGGSGDAGLAALWVVPESAPALSAAGQAGFTA GELFCNAHTAAHAGGEIRGQLDLGGPLRIATLDGAQETPPVVTNAFGAAAFTVDPGTLRMRGVVVTSGVPTANAAHVHLG ARDAPGEIIVPLAGGPEVWVVPDGAPPLTTAQREAFEAGTLFVNVHTPAHAGGEIRGQLDHRGTARLAALDGAQEVPATG SSGFGAGLLVVDDATGRPGGFVISRRLTAESAAHVHQAARGTSGGIIVPLFGRPGLWVVRDDAEPLTAEQRTAFDAGGLY YNVHTTANPAGEIRGQLGRGGPLRIASLDGAQETPPVTSAGFGAGLLALDDGGGGEVGGFVVAAGLTGATAAHVHQGARG APGDILVPLSGP
Sequences:
>Translated_412_residues MGHVLLRSPSRHALLTSLLLAACGGGGYGGGGGGGGGGGYGDGGGGGGGGGSGDAGLAALWVVPESAPALSAAGQAGFTA GELFCNAHTAAHAGGEIRGQLDLGGPLRIATLDGAQETPPVVTNAFGAAAFTVDPGTLRMRGVVVTSGVPTANAAHVHLG ARDAPGEIIVPLAGGPEVWVVPDGAPPLTTAQREAFEAGTLFVNVHTPAHAGGEIRGQLDHRGTARLAALDGAQEVPATG SSGFGAGLLVVDDATGRPGGFVISRRLTAESAAHVHQAARGTSGGIIVPLFGRPGLWVVRDDAEPLTAEQRTAFDAGGLY YNVHTTANPAGEIRGQLGRGGPLRIASLDGAQETPPVTSAGFGAGLLALDDGGGGEVGGFVVAAGLTGATAAHVHQGARG APGDILVPLSGP >Mature_411_residues GHVLLRSPSRHALLTSLLLAACGGGGYGGGGGGGGGGGYGDGGGGGGGGGSGDAGLAALWVVPESAPALSAAGQAGFTAG ELFCNAHTAAHAGGEIRGQLDLGGPLRIATLDGAQETPPVVTNAFGAAAFTVDPGTLRMRGVVVTSGVPTANAAHVHLGA RDAPGEIIVPLAGGPEVWVVPDGAPPLTTAQREAFEAGTLFVNVHTPAHAGGEIRGQLDHRGTARLAALDGAQEVPATGS SGFGAGLLVVDDATGRPGGFVISRRLTAESAAHVHQAARGTSGGIIVPLFGRPGLWVVRDDAEPLTAEQRTAFDAGGLYY NVHTTANPAGEIRGQLGRGGPLRIASLDGAQETPPVTSAGFGAGLLALDDGGGGEVGGFVVAAGLTGATAAHVHQGARGA PGDILVPLSGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40053; Mature: 39922
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50933 CHRD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHVLLRSPSRHALLTSLLLAACGGGGYGGGGGGGGGGGYGDGGGGGGGGGSGDAGLAAL CCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE WVVPESAPALSAAGQAGFTAGELFCNAHTAAHAGGEIRGQLDLGGPLRIATLDGAQETPP EEECCCCCCHHCCCCCCCCHHHEEEECCHHHCCCCEEEEEEECCCCEEEEEECCCCCCCC VVTNAFGAAAFTVDPGTLRMRGVVVTSGVPTANAAHVHLGARDAPGEIIVPLAGGPEVWV CEEECCCCEEEEECCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEE VPDGAPPLTTAQREAFEAGTLFVNVHTPAHAGGEIRGQLDHRGTARLAALDGAQEVPATG ECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCC SSGFGAGLLVVDDATGRPGGFVISRRLTAESAAHVHQAARGTSGGIIVPLFGRPGLWVVR CCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEE DDAEPLTAEQRTAFDAGGLYYNVHTTANPAGEIRGQLGRGGPLRIASLDGAQETPPVTSA CCCCCCCCHHHCEEECCCEEEEEEECCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC GFGAGLLALDDGGGGEVGGFVVAAGLTGATAAHVHQGARGAPGDILVPLSGP CCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCEEEECCCC >Mature Secondary Structure GHVLLRSPSRHALLTSLLLAACGGGGYGGGGGGGGGGGYGDGGGGGGGGGSGDAGLAAL CCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE WVVPESAPALSAAGQAGFTAGELFCNAHTAAHAGGEIRGQLDLGGPLRIATLDGAQETPP EEECCCCCCHHCCCCCCCCHHHEEEECCHHHCCCCEEEEEEECCCCEEEEEECCCCCCCC VVTNAFGAAAFTVDPGTLRMRGVVVTSGVPTANAAHVHLGARDAPGEIIVPLAGGPEVWV CEEECCCCEEEEECCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEE VPDGAPPLTTAQREAFEAGTLFVNVHTPAHAGGEIRGQLDHRGTARLAALDGAQEVPATG ECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCC SSGFGAGLLVVDDATGRPGGFVISRRLTAESAAHVHQAARGTSGGIIVPLFGRPGLWVVR CCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEE DDAEPLTAEQRTAFDAGGLYYNVHTTANPAGEIRGQLGRGGPLRIASLDGAQETPPVTSA CCCCCCCCHHHCEEECCCEEEEEEECCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC GFGAGLLALDDGGGGEVGGFVVAAGLTGATAAHVHQGARGAPGDILVPLSGP CCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA