| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918409
Identifier: 220918409
GI number: 220918409
Start: 3691607
End: 3692935
Strand: Direct
Name: 220918409
Synonym: A2cp1_3313
Alternate gene names: NA
Gene position: 3691607-3692935 (Clockwise)
Preceding gene: 220918406
Following gene: 220918410
Centisome position: 73.4
GC content: 66.89
Gene sequence:
>1329_bases ATGGCAAGCGATCGCGGGTCCTCGAGGTGGAGCCGTCGGCAGTTCGTGAAGGCTGCGGGCGTGGGCGCCCTGGCGGCGGC CGGGCTGCCGCGCCGCGCGCGCGCGCAGGGCGGCAAGACGCTCAAGATCATCCAGTGGAGCCACTTCGTGCCGGGCTACG ACAAGTGGTTCGACGGCACCTTCTGCAAGCAGTGGGGCGAGAAGCACGGCACGCGGGTGATCGTCGATCACATCTCCATC CCGGAGATCAACGCCCGCGCCGCCGCCGAGGTCTCCGCGCAGAAGGGCCACGACCTGTTCATGTTCCTCTCGCCGCCGGC GGCGTACGAGAAGCAGGTCATCGACCACACCGAGATCTACCAGCAGGTGGAGAAGCGCTGGGGCAAGGTGAACGACCTCG GGCACAAGTCCACGTTCAACCCGAAGACCAGGAAGTACTTCGCGTTCGCGGACAGCTACGTCCCGGACCCCGGCAACTAC CGGCAGGATCTCTGGTCGCAGGTCGGCTTCCCGCACGGCCCGGACACCTGGGAGGACCTGCGCAAGGGTGCCGCGGCCAT CAAGCAGAAGATCGGCAACCCGTGCGGCATCGGGCTCTCGCAGGAGCTCGACACGAACATGGCCATGCGCGCGCTGCTCT GGTCGTTCGGCGGCTCGGTGCAGGACGCGGAGGGCCGGGTGGTCATCAATTCGCCGCAGACCATCCAGGCGCTCGAGTTC ATGCGCGCGCTGCAGAAGGAGGCGCAGACCGGGGAGGTGTTCACCTGGGATCCCTCCTCGAACAACCGGGGCATCCTGGC CGGCAAGCTCTCCTTCGTGCTGAACGCGATCTCGGTGACGCGCACCGCCGAGAAGGAGAACCCGGAGATGTCGAAGAAGA TCCAGATCGTGCCCGCGCTGAAGGGGCCGGTGCGCCGGATGGCGGCCGAGCACGTCATGGACTGCTACGTCATCTGGAAG TTCGCCGAGAACAAGGACGGCGCGAAGCAGTTCCTGGTGGACTACCTGGACGCGTTCGGCGACGCGTTCAAGGCGAGCGA GTTCTACAACTTCCCCTGCTTCCCGAAGACGGTGCCGGACATCGCCCAGCAGGTGGCGAACGACCCGAAGGGCGTGCCGC CGGACAAGTACAAGGTGCTCGCGGGCGTGACCGAGTGGGCCACCAACGTCGGCTACCCCGGCTACGCCACCGCCGCCGTG GACGAGGTGTTCAACACCTTCGTGATCCCGACGATGTTCGCGAAGGTCGCGCGCGACGAGATGCCGGCGCGCGACGCCGC CAAGGCGGCCGAGGCCGAGGTGAAGCGCATCTTCGACAAGTGGAAGTGA
Upstream 100 bases:
>100_bases AGCGCCGGACCCGTCAGGCGCACGGCCGCCAGCCGCCCTCGTACATAGCGATGCAGAGGTCACGGTTTCGCGCGCGAACG ATCGCGCGCCGGAGGTCGGG
Downstream 100 bases:
>100_bases GGCGGAGGGGCGCGTGGCGGTCGTCGAGACGCGGAGGCTCACCAAGATCTTCCGGAAGGCCGACCAGGGCGCCGCGGTCA ACGAGGTGGACCTCGCCACC
Product: family 1 extracellular solute-binding protein
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MASDRGSSRWSRRQFVKAAGVGALAAAGLPRRARAQGGKTLKIIQWSHFVPGYDKWFDGTFCKQWGEKHGTRVIVDHISI PEINARAAAEVSAQKGHDLFMFLSPPAAYEKQVIDHTEIYQQVEKRWGKVNDLGHKSTFNPKTRKYFAFADSYVPDPGNY RQDLWSQVGFPHGPDTWEDLRKGAAAIKQKIGNPCGIGLSQELDTNMAMRALLWSFGGSVQDAEGRVVINSPQTIQALEF MRALQKEAQTGEVFTWDPSSNNRGILAGKLSFVLNAISVTRTAEKENPEMSKKIQIVPALKGPVRRMAAEHVMDCYVIWK FAENKDGAKQFLVDYLDAFGDAFKASEFYNFPCFPKTVPDIAQQVANDPKGVPPDKYKVLAGVTEWATNVGYPGYATAAV DEVFNTFVIPTMFAKVARDEMPARDAAKAAEAEVKRIFDKWK
Sequences:
>Translated_442_residues MASDRGSSRWSRRQFVKAAGVGALAAAGLPRRARAQGGKTLKIIQWSHFVPGYDKWFDGTFCKQWGEKHGTRVIVDHISI PEINARAAAEVSAQKGHDLFMFLSPPAAYEKQVIDHTEIYQQVEKRWGKVNDLGHKSTFNPKTRKYFAFADSYVPDPGNY RQDLWSQVGFPHGPDTWEDLRKGAAAIKQKIGNPCGIGLSQELDTNMAMRALLWSFGGSVQDAEGRVVINSPQTIQALEF MRALQKEAQTGEVFTWDPSSNNRGILAGKLSFVLNAISVTRTAEKENPEMSKKIQIVPALKGPVRRMAAEHVMDCYVIWK FAENKDGAKQFLVDYLDAFGDAFKASEFYNFPCFPKTVPDIAQQVANDPKGVPPDKYKVLAGVTEWATNVGYPGYATAAV DEVFNTFVIPTMFAKVARDEMPARDAAKAAEAEVKRIFDKWK >Mature_441_residues ASDRGSSRWSRRQFVKAAGVGALAAAGLPRRARAQGGKTLKIIQWSHFVPGYDKWFDGTFCKQWGEKHGTRVIVDHISIP EINARAAAEVSAQKGHDLFMFLSPPAAYEKQVIDHTEIYQQVEKRWGKVNDLGHKSTFNPKTRKYFAFADSYVPDPGNYR QDLWSQVGFPHGPDTWEDLRKGAAAIKQKIGNPCGIGLSQELDTNMAMRALLWSFGGSVQDAEGRVVINSPQTIQALEFM RALQKEAQTGEVFTWDPSSNNRGILAGKLSFVLNAISVTRTAEKENPEMSKKIQIVPALKGPVRRMAAEHVMDCYVIWKF AENKDGAKQFLVDYLDAFGDAFKASEFYNFPCFPKTVPDIAQQVANDPKGVPPDKYKVLAGVTEWATNVGYPGYATAAVD EVFNTFVIPTMFAKVARDEMPARDAAKAAEAEVKRIFDKWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49235; Mature: 49104
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASDRGSSRWSRRQFVKAAGVGALAAAGLPRRARAQGGKTLKIIQWSHFVPGYDKWFDGT CCCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCHHHHCCCH FCKQWGEKHGTRVIVDHISIPEINARAAAEVSAQKGHDLFMFLSPPAAYEKQVIDHTEIY HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH QQVEKRWGKVNDLGHKSTFNPKTRKYFAFADSYVPDPGNYRQDLWSQVGFPHGPDTWEDL HHHHHHCCCHHCCCCCCCCCCCHHEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHH RKGAAAIKQKIGNPCGIGLSQELDTNMAMRALLWSFGGSVQDAEGRVVINSPQTIQALEF HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHH MRALQKEAQTGEVFTWDPSSNNRGILAGKLSFVLNAISVTRTAEKENPEMSKKIQIVPAL HHHHHHHCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEECC KGPVRRMAAEHVMDCYVIWKFAENKDGAKQFLVDYLDAFGDAFKASEFYNFPCFPKTVPD HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH IAQQVANDPKGVPPDKYKVLAGVTEWATNVGYPGYATAAVDEVFNTFVIPTMFAKVARDE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC MPARDAAKAAEAEVKRIFDKWK CCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASDRGSSRWSRRQFVKAAGVGALAAAGLPRRARAQGGKTLKIIQWSHFVPGYDKWFDGT CCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCHHHHCCCH FCKQWGEKHGTRVIVDHISIPEINARAAAEVSAQKGHDLFMFLSPPAAYEKQVIDHTEIY HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH QQVEKRWGKVNDLGHKSTFNPKTRKYFAFADSYVPDPGNYRQDLWSQVGFPHGPDTWEDL HHHHHHCCCHHCCCCCCCCCCCHHEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHH RKGAAAIKQKIGNPCGIGLSQELDTNMAMRALLWSFGGSVQDAEGRVVINSPQTIQALEF HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHH MRALQKEAQTGEVFTWDPSSNNRGILAGKLSFVLNAISVTRTAEKENPEMSKKIQIVPAL HHHHHHHCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEECC KGPVRRMAAEHVMDCYVIWKFAENKDGAKQFLVDYLDAFGDAFKASEFYNFPCFPKTVPD HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH IAQQVANDPKGVPPDKYKVLAGVTEWATNVGYPGYATAAVDEVFNTFVIPTMFAKVARDE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC MPARDAAKAAEAEVKRIFDKWK CCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA