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The map label for this gene is ycdQ [C]

Identifier: 220918348

GI number: 220918348

Start: 3608939

End: 3609871

Strand: Direct

Name: ycdQ [C]

Synonym: A2cp1_3252

Alternate gene names: 220918348

Gene position: 3608939-3609871 (Clockwise)

Preceding gene: 220918347

Following gene: 220918349

Centisome position: 71.76

GC content: 71.28

Gene sequence:

>933_bases
ATGCCATTCCGCGCCTGCCCTAGCGTCGAGGAGCTGCCGTCACCGCCGCGCGACGCGCGCGGGTGGCCCTGGACCACCGG
CCCCGCGGCGCCGCCCGCGGCGGGGCCGTTGCCCACCGTCACGCTGGTCACCCCGTCGTTCAACCAGGCGAGGTTTCTCG
AGGCGACGATCCGCTCGGTGCTCCTCCAGGGCTACCCTTCGCTCGAGTACGTGATCATGGACGGCGGATCGACGGACGGC
TCCGTCGAGATCATCCGCAAGTACGAGCCGTGGTTGGCAGCGTGGGTCTCGCGGAGGGACCGCGGCCAGAGCGACGCGCT
GAACCAGGGGCTCGCGCGCGCCGAGGGTGAGGTTGTGAACTGGCTGTGCAGCGACGACCGGCTCGTCCCCGGCGCGCTCC
ACGCGCTCGCGCGGTTCCGGGCCGCGAACCCCGACGCGATCGCCTGGGCCGGCGCCTGTCGAACCGTCACGATCGAGGGG
CGGTCGTACTACACCAACGCGCCCAGGGGTGCGACGCGCGAGGAGCTCGCCGACTGGGGCCGCTCCGGCAGGATCTCCCA
GCCTGCCTGCTTCTTCCGGCGGGACGCATGGGAGCGGCTGCGCGGCGTGGAGGAGTCCTACCACTATGCGATGGACTTCG
ACCTCTGGCTCCGGATGTCGGCGCTCGGCCGCTTCGCCCTCACCGAGGAGGTCTGGGCCGAGGAGACGATGCACGACGCC
ACCAAGAGCTTCGGCCAGCGCGGCCGCTCGCTGGCGGAGGTGCACCTCATCCAGATTCGCCACGGCTTCGAACGCGTCGC
GCTCGAGCGGATGGGAGAGGCCCTCCAGCAGCGCGAGGACATGCTCGCCCGGCATCCGGCCATCCGCCTGAAGACGCAGC
TCAACCTGTGGGTGCGGCCATTCCTGGACGCGCTCCGCAAGCCGTCGAGATGA

Upstream 100 bases:

>100_bases
GGAGCTGGCCATCCTGTCCGCGGAGCGAGACGAGGCGGCCCGGAAGCCGTCGGCCCAGGATGCGCCGCCGCATCGCGGCT
GATCGCCGGCCCGCGAAGCG

Downstream 100 bases:

>100_bases
GCGCCCCGTCCTTCTCGGTGATCCTCGCCACCGTGCACCGCCCGGAGCTCGCGACGGCTGCGGCCCGCTCGGTGCTGGGC
GGAACCTGGAGCGACCTCGA

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MPFRACPSVEELPSPPRDARGWPWTTGPAAPPAAGPLPTVTLVTPSFNQARFLEATIRSVLLQGYPSLEYVIMDGGSTDG
SVEIIRKYEPWLAAWVSRRDRGQSDALNQGLARAEGEVVNWLCSDDRLVPGALHALARFRAANPDAIAWAGACRTVTIEG
RSYYTNAPRGATREELADWGRSGRISQPACFFRRDAWERLRGVEESYHYAMDFDLWLRMSALGRFALTEEVWAEETMHDA
TKSFGQRGRSLAEVHLIQIRHGFERVALERMGEALQQREDMLARHPAIRLKTQLNLWVRPFLDALRKPSR

Sequences:

>Translated_310_residues
MPFRACPSVEELPSPPRDARGWPWTTGPAAPPAAGPLPTVTLVTPSFNQARFLEATIRSVLLQGYPSLEYVIMDGGSTDG
SVEIIRKYEPWLAAWVSRRDRGQSDALNQGLARAEGEVVNWLCSDDRLVPGALHALARFRAANPDAIAWAGACRTVTIEG
RSYYTNAPRGATREELADWGRSGRISQPACFFRRDAWERLRGVEESYHYAMDFDLWLRMSALGRFALTEEVWAEETMHDA
TKSFGQRGRSLAEVHLIQIRHGFERVALERMGEALQQREDMLARHPAIRLKTQLNLWVRPFLDALRKPSR
>Mature_309_residues
PFRACPSVEELPSPPRDARGWPWTTGPAAPPAAGPLPTVTLVTPSFNQARFLEATIRSVLLQGYPSLEYVIMDGGSTDGS
VEIIRKYEPWLAAWVSRRDRGQSDALNQGLARAEGEVVNWLCSDDRLVPGALHALARFRAANPDAIAWAGACRTVTIEGR
SYYTNAPRGATREELADWGRSGRISQPACFFRRDAWERLRGVEESYHYAMDFDLWLRMSALGRFALTEEVWAEETMHDAT
KSFGQRGRSLAEVHLIQIRHGFERVALERMGEALQQREDMLARHPAIRLKTQLNLWVRPFLDALRKPSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 34971; Mature: 34840

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFRACPSVEELPSPPRDARGWPWTTGPAAPPAAGPLPTVTLVTPSFNQARFLEATIRSV
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
LLQGYPSLEYVIMDGGSTDGSVEIIRKYEPWLAAWVSRRDRGQSDALNQGLARAEGEVVN
HHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEE
WLCSDDRLVPGALHALARFRAANPDAIAWAGACRTVTIEGRSYYTNAPRGATREELADWG
EEECCCCCCHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCEEECCCCCCCCHHHHHHCC
RSGRISQPACFFRRDAWERLRGVEESYHYAMDFDLWLRMSALGRFALTEEVWAEETMHDA
CCCCCCCCHHHHHHHHHHHHHCHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKSFGQRGRSLAEVHLIQIRHGFERVALERMGEALQQREDMLARHPAIRLKTQLNLWVRP
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH
FLDALRKPSR
HHHHHCCCCC
>Mature Secondary Structure 
PFRACPSVEELPSPPRDARGWPWTTGPAAPPAAGPLPTVTLVTPSFNQARFLEATIRSV
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
LLQGYPSLEYVIMDGGSTDGSVEIIRKYEPWLAAWVSRRDRGQSDALNQGLARAEGEVVN
HHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEE
WLCSDDRLVPGALHALARFRAANPDAIAWAGACRTVTIEGRSYYTNAPRGATREELADWG
EEECCCCCCHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCEEECCCCCCCCHHHHHHCC
RSGRISQPACFFRRDAWERLRGVEESYHYAMDFDLWLRMSALGRFALTEEVWAEETMHDA
CCCCCCCCHHHHHHHHHHHHHCHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKSFGQRGRSLAEVHLIQIRHGFERVALERMGEALQQREDMLARHPAIRLKTQLNLWVRP
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH
FLDALRKPSR
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA