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The map label for this gene is ybfF [C]

Identifier: 220918346

GI number: 220918346

Start: 3607803

End: 3608540

Strand: Direct

Name: ybfF [C]

Synonym: A2cp1_3250

Alternate gene names: 220918346

Gene position: 3607803-3608540 (Clockwise)

Preceding gene: 220918344

Following gene: 220918347

Centisome position: 71.74

GC content: 73.31

Gene sequence:

>738_bases
TTGACGCACGCACTCGTCGCCGAGACGCCGCACGCCCACCCGGCCCGTCTGCTGGTGGTGATGCCCGCTTTCAACGAGGC
TCGGGGTATCCGGCGGGTGGTCGAGGCGGTGCGCGACCAGGTGGCGGGCGACGTCCTCGTCGTCGACGACGGCTCCACCG
ACGAGACCGCCGCCGAGGCGCGCGCCGGAGGCGCCCGCGTGGCGGTCCACCCCGTGAACCTCGGCTACGGCGCGGCCCTC
CAGACCGGCTACCGGTACGCGTTGCGCCACGGGTACGACGCCGTCCTCCAGCTCGACGCCGACGGCCAGCACGACCCCGC
GTCCATCCCGCGGCTGCTCACGGCGCTCCAGGGGGCCGACGTCGTCGTCGGCTCGCGCTTCCTCGACTCGGGGTCGTACC
GGCCGCCGCTGGCGCGGCGGATAGGGATGTGGCTGTTCGGGCGGGTGGCGAGCGCGCTGTCCGGCCAGCGGATCACCGAC
CCCACCAGCGGGTTCCAGGCCATCTCACGCGAGGCGCTGCGCTTCTACGCGCACGAGCGATACCCGGTGGACTACCCCGA
CGCCGACGTCCTCGCGATGGTCGCGCGCGCGGGGCTGCGCCTGGCCGAGGTGCCGGTCCGGATGCTCCCCCCGCCCGACG
GCAAGAGCATGCACGGCGGCATCGTCAAGCCGTTCTACTACGTGTTCCGGATGTCGCTGGCGCTGTTCCTGGTTCCGCTC
CGGAGGGAGACGCGATGA

Upstream 100 bases:

>100_bases
CGGGGTAATGATGGAGACTCGCAACCGCCCTCCGAGGCAGCGTTCGGTCCGGACCTGCGCGCTTTTCCCGGTCCCGCGCG
TATGCTACGTCATTCCTGCC

Downstream 100 bases:

>100_bases
CGCCCACCCAGCGCGTATTCGCGATCACGGCCAGCCTGATCACGTTCGGCGTGATCCTGGAGCTGGTCCGGCGCCGCAAG
CTGAAGGAGGAGTACTCGTT

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTHALVAETPHAHPARLLVVMPAFNEARGIRRVVEAVRDQVAGDVLVVDDGSTDETAAEARAGGARVAVHPVNLGYGAAL
QTGYRYALRHGYDAVLQLDADGQHDPASIPRLLTALQGADVVVGSRFLDSGSYRPPLARRIGMWLFGRVASALSGQRITD
PTSGFQAISREALRFYAHERYPVDYPDADVLAMVARAGLRLAEVPVRMLPPPDGKSMHGGIVKPFYYVFRMSLALFLVPL
RRETR

Sequences:

>Translated_245_residues
MTHALVAETPHAHPARLLVVMPAFNEARGIRRVVEAVRDQVAGDVLVVDDGSTDETAAEARAGGARVAVHPVNLGYGAAL
QTGYRYALRHGYDAVLQLDADGQHDPASIPRLLTALQGADVVVGSRFLDSGSYRPPLARRIGMWLFGRVASALSGQRITD
PTSGFQAISREALRFYAHERYPVDYPDADVLAMVARAGLRLAEVPVRMLPPPDGKSMHGGIVKPFYYVFRMSLALFLVPL
RRETR
>Mature_244_residues
THALVAETPHAHPARLLVVMPAFNEARGIRRVVEAVRDQVAGDVLVVDDGSTDETAAEARAGGARVAVHPVNLGYGAALQ
TGYRYALRHGYDAVLQLDADGQHDPASIPRLLTALQGADVVVGSRFLDSGSYRPPLARRIGMWLFGRVASALSGQRITDP
TSGFQAISREALRFYAHERYPVDYPDADVLAMVARAGLRLAEVPVRMLPPPDGKSMHGGIVKPFYYVFRMSLALFLVPLR
RETR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 26694; Mature: 26563

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHALVAETPHAHPARLLVVMPAFNEARGIRRVVEAVRDQVAGDVLVVDDGSTDETAAEA
CCCCEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
RAGGARVAVHPVNLGYGAALQTGYRYALRHGYDAVLQLDADGQHDPASIPRLLTALQGAD
HCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC
VVVGSRFLDSGSYRPPLARRIGMWLFGRVASALSGQRITDPTSGFQAISREALRFYAHER
EEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
YPVDYPDADVLAMVARAGLRLAEVPVRMLPPPDGKSMHGGIVKPFYYVFRMSLALFLVPL
CCCCCCCHHHHHHHHHHCCEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RRETR
HHCCC
>Mature Secondary Structure 
THALVAETPHAHPARLLVVMPAFNEARGIRRVVEAVRDQVAGDVLVVDDGSTDETAAEA
CCCEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
RAGGARVAVHPVNLGYGAALQTGYRYALRHGYDAVLQLDADGQHDPASIPRLLTALQGAD
HCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC
VVVGSRFLDSGSYRPPLARRIGMWLFGRVASALSGQRITDPTSGFQAISREALRFYAHER
EEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
YPVDYPDADVLAMVARAGLRLAEVPVRMLPPPDGKSMHGGIVKPFYYVFRMSLALFLVPL
CCCCCCCHHHHHHHHHHCCEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RRETR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]