Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is pucG [H]
Identifier: 220918291
GI number: 220918291
Start: 3538083
End: 3539273
Strand: Direct
Name: pucG [H]
Synonym: A2cp1_3194
Alternate gene names: 220918291
Gene position: 3538083-3539273 (Clockwise)
Preceding gene: 220918289
Following gene: 220918293
Centisome position: 70.35
GC content: 73.97
Gene sequence:
>1191_bases ATGAGCACCCCCGTCGTCTCCGAGCTGGCGCCTCCCCTGCGCCTGCTCCTCGGCCCCGGTCCCAGCATGGTCCACCCGCG CGTGCTCCGCGCGATGTCCACCCCGCTGCTCGGCCACCTCGATCCGAAGTTCCTCGAGATCATGAACGAGGTGCAGGCGC AGCTCCGCGCCGTGTTCCGCACCGAGAACCCGTTCACCATCGCGGTGTCGGGCACGGGCTCGGCCGGCATGGAGGCGGCG CTCGTCAACCTGCTCGAGCCGGGCGACACCGCCGTGGTGGTGGTGGCGGGCGTGTTCGGCGGGCGCATGGCGGACATCGT GGGCCGCTGCGGCGCCCGGCTGGTGAAGATCGACGTGCCCTGGGGCGAGGTGTGCGATCCGGCCCGCATCGAGGAGGCGC TGAAGCGGGAGGGCAAGGTGAAGGTGGTGGCGCTGGTCCACGCCGAGACCTCCACCGGCGCGCACCAGCCGCTCGAGGGG CTGGGCGCCCTGTGCCACGCGCACGGCGCGCTGCTCGTCGCGGACACGGTCACCTCGCTCGGCGGCGTGCCGGTCGAGGT GGACGCCTGGGGCGTGGACGCGTGCTACTCCGGCACGCAGAAGTGCCTGTCCTGCCCGCCCGGGCTGGCCCCGCTGACGC TCTCGCCGCGCGCGCTCGAGGCGGTGAAGGCGCGCAAGACCAAGGTGCAGAGCTGGTACCTCGACGCCGGCATGGTGGCG GACTACTGGGCCGAGGGGAAGCGCGTGTACCACCACACCGCGCCCATCTCGATGGTGTACGCGCTCCGCGAGTCGCTCCG CCTGGTGCTCGAGGAGGGGCTCGAGGCGCGCTTCGCGCGGCACCGCCGCCACTCCGCCGCGCTCATGGCCGGCGTCGCCG CGCTCGGGTTCGAGCCGCAGGCGCAGGAGGGTCACCGCCTCCCGTCGCTGAACTGCATCAAGGTGCCGGCCGGCGTCGAC GAGGCGGCCGCGCGCAAGGGCCTGCTCGCCGATCACTCCATCGAGATCGGCGGCGGCCTCGGCCCGCTCGCGGGCAAGGT GTGGCGCATCGGGCTCATGGGCGAGTCGGCCCGGCAGGAGAACGTGCTCGCGGTGCTCGCCGCGATCGAGCAGGCGCTCG CGAAGCAGGGCAAGCTCGCCCGCGCCGGCGCGTCGCTCGCCGCCGCGCTCGAGTCCTACGCGCGGTCGTAG
Upstream 100 bases:
>100_bases GCGAATCCCCTCCCGGGGTCGCGCGGGCCGCCGGCGATCGCGTAAGCTCGTCGACCTCCTCTCCCCAGGCCGGCCCCGCG CCGGCGCCCACGAGGTCCCC
Downstream 100 bases:
>100_bases GCGGACGTCGCCGCGGGGTGTGCCGGGAGGAGGTGCATCCCGCGGCGCTACGCAGGCTGTACGAGGGTCAGCGCCGGCAC CGGTACCCGCGCCAGCAACC
Product: class V aminotransferase
Products: pyruvate; glycine
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSTPVVSELAPPLRLLLGPGPSMVHPRVLRAMSTPLLGHLDPKFLEIMNEVQAQLRAVFRTENPFTIAVSGTGSAGMEAA LVNLLEPGDTAVVVVAGVFGGRMADIVGRCGARLVKIDVPWGEVCDPARIEEALKREGKVKVVALVHAETSTGAHQPLEG LGALCHAHGALLVADTVTSLGGVPVEVDAWGVDACYSGTQKCLSCPPGLAPLTLSPRALEAVKARKTKVQSWYLDAGMVA DYWAEGKRVYHHTAPISMVYALRESLRLVLEEGLEARFARHRRHSAALMAGVAALGFEPQAQEGHRLPSLNCIKVPAGVD EAAARKGLLADHSIEIGGGLGPLAGKVWRIGLMGESARQENVLAVLAAIEQALAKQGKLARAGASLAAALESYARS
Sequences:
>Translated_396_residues MSTPVVSELAPPLRLLLGPGPSMVHPRVLRAMSTPLLGHLDPKFLEIMNEVQAQLRAVFRTENPFTIAVSGTGSAGMEAA LVNLLEPGDTAVVVVAGVFGGRMADIVGRCGARLVKIDVPWGEVCDPARIEEALKREGKVKVVALVHAETSTGAHQPLEG LGALCHAHGALLVADTVTSLGGVPVEVDAWGVDACYSGTQKCLSCPPGLAPLTLSPRALEAVKARKTKVQSWYLDAGMVA DYWAEGKRVYHHTAPISMVYALRESLRLVLEEGLEARFARHRRHSAALMAGVAALGFEPQAQEGHRLPSLNCIKVPAGVD EAAARKGLLADHSIEIGGGLGPLAGKVWRIGLMGESARQENVLAVLAAIEQALAKQGKLARAGASLAAALESYARS >Mature_395_residues STPVVSELAPPLRLLLGPGPSMVHPRVLRAMSTPLLGHLDPKFLEIMNEVQAQLRAVFRTENPFTIAVSGTGSAGMEAAL VNLLEPGDTAVVVVAGVFGGRMADIVGRCGARLVKIDVPWGEVCDPARIEEALKREGKVKVVALVHAETSTGAHQPLEGL GALCHAHGALLVADTVTSLGGVPVEVDAWGVDACYSGTQKCLSCPPGLAPLTLSPRALEAVKARKTKVQSWYLDAGMVAD YWAEGKRVYHHTAPISMVYALRESLRLVLEEGLEARFARHRRHSAALMAGVAALGFEPQAQEGHRLPSLNCIKVPAGVDE AAARKGLLADHSIEIGGGLGPLAGKVWRIGLMGESARQENVLAVLAAIEQALAKQGKLARAGASLAAALESYARS
Specific function: Could encode ureidoglycolase or L-alanine:glyoxylate aminotransferase, or perhaps both activities [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=372, Percent_Identity=41.6666666666667, Blast_Score=284, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17536281, Length=370, Percent_Identity=44.5945945945946, Blast_Score=304, Evalue=6e-83, Organism=Saccharomyces cerevisiae, GI6321079, Length=377, Percent_Identity=27.5862068965517, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI17530823, Length=369, Percent_Identity=40.9214092140921, Blast_Score=278, Evalue=6e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.44
Molecular weight: Translated: 41647; Mature: 41516
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPVVSELAPPLRLLLGPGPSMVHPRVLRAMSTPLLGHLDPKFLEIMNEVQAQLRAVFR CCCCCHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC TENPFTIAVSGTGSAGMEAALVNLLEPGDTAVVVVAGVFGGRMADIVGRCGARLVKIDVP CCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEHHCCHHHHHHHHCCCEEEEEECC WGEVCDPARIEEALKREGKVKVVALVHAETSTGAHQPLEGLGALCHAHGALLVADTVTSL CCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHH GGVPVEVDAWGVDACYSGTQKCLSCPPGLAPLTLSPRALEAVKARKTKVQSWYLDAGMVA CCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHEECCCHHH DYWAEGKRVYHHTAPISMVYALRESLRLVLEEGLEARFARHRRHSAALMAGVAALGFEPQ HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AQEGHRLPSLNCIKVPAGVDEAAARKGLLADHSIEIGGGLGPLAGKVWRIGLMGESARQE CCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCEEECCCCCCCCHHHEEEEECCCCCHHH NVLAVLAAIEQALAKQGKLARAGASLAAALESYARS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STPVVSELAPPLRLLLGPGPSMVHPRVLRAMSTPLLGHLDPKFLEIMNEVQAQLRAVFR CCCCHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC TENPFTIAVSGTGSAGMEAALVNLLEPGDTAVVVVAGVFGGRMADIVGRCGARLVKIDVP CCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEHHCCHHHHHHHHCCCEEEEEECC WGEVCDPARIEEALKREGKVKVVALVHAETSTGAHQPLEGLGALCHAHGALLVADTVTSL CCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHH GGVPVEVDAWGVDACYSGTQKCLSCPPGLAPLTLSPRALEAVKARKTKVQSWYLDAGMVA CCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHEECCCHHH DYWAEGKRVYHHTAPISMVYALRESLRLVLEEGLEARFARHRRHSAALMAGVAALGFEPQ HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AQEGHRLPSLNCIKVPAGVDEAAARKGLLADHSIEIGGGLGPLAGKVWRIGLMGESARQE CCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCEEECCCCCCCCHHHEEEEECCCCCHHH NVLAVLAAIEQALAKQGKLARAGASLAAALESYARS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-alanine; glyoxylate
Specific reaction: L-alanine + glyoxylate = pyruvate + glycine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]