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The map label for this gene is 220918275

Identifier: 220918275

GI number: 220918275

Start: 3521806

End: 3522441

Strand: Direct

Name: 220918275

Synonym: A2cp1_3178

Alternate gene names: NA

Gene position: 3521806-3522441 (Clockwise)

Preceding gene: 220918274

Following gene: 220918276

Centisome position: 70.03

GC content: 69.65

Gene sequence:

>636_bases
GTGAACCGTAACACCGTCATCGCCCTCGTCGTGGGGCTCGTGGTCGGCTTCCTGATCGGCCAGCTGGCCTCGAGGCGGGA
TCAGGTGACGTCCGTCCCAGTGGTCGCCGCGCCCACCGGCACGCCGGCGATGCCGGCCATGCCGCCCGGCGGGATGGGCG
GGCTGCCCGCGCCGATGCCCTCGCCCGGCGCCAGCATGGACCTGCAGGCCCGCATCACCGCCGCCGAGCAGATCGTCGCG
AAGGACCCCAGGAACGTCCGCGCCTGGATCCAGCTCGGCAACGACTACTTCGACTCGCGCCAGGCGCAGAAGGCGGTCGA
GGCCTACGGGCGCGCGCTCGAGCTCGAGCCCAACAACCCCGACGTCCTCACCGACCAGGGCGTGATGTACCGGGACCTCG
GCAACTTCGACAAGGCGATCGCCAACTTCAAGAAGGCGAACGAGGTCGATCCGAAGCACGTGCAGAGCCTGTTCAACCTC
GGCGTGGTCTACCTGCACGATCTCCAGGACGCGGACAAGGCCGCGAAGGCCTGGAACCAGGTGATCTCGGCCGCGCCGAC
GAGCCCGCAGGCGCAGCAGGCGCAGCAGGCGCTGACGCAGCTCAAGGCGAACCCGCCGCCGCCGAAGAAGAAGTAG

Upstream 100 bases:

>100_bases
TCTTCTCCGGCCGGCGCCCAGTCACGGACGGGTGATCTTCTGCTGGCGCGAAGGGGGTGAGTGATGCTTACATCAGCGCC
CTTCCAAGAAGGAGGTCCGC

Downstream 100 bases:

>100_bases
AGAGCCCGCCGCACCGGCCGGGGCGCCGCGACCGCGGCGTCCGGCCGCGCGGGGGCGGGCAGCGCGGCGTCCAGCCGCGC
CGGGCTGGCGGCGCGGCTCC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; TPR Domain-Containing Protein; TPR Domain Containing Protein; Tetratricopeptide Domain-Containing Protein; Peroxisomal Targeting Signal Type 1 Receptor; Sugar Transporter Superfamily Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNRNTVIALVVGLVVGFLIGQLASRRDQVTSVPVVAAPTGTPAMPAMPPGGMGGLPAPMPSPGASMDLQARITAAEQIVA
KDPRNVRAWIQLGNDYFDSRQAQKAVEAYGRALELEPNNPDVLTDQGVMYRDLGNFDKAIANFKKANEVDPKHVQSLFNL
GVVYLHDLQDADKAAKAWNQVISAAPTSPQAQQAQQALTQLKANPPPPKKK

Sequences:

>Translated_211_residues
MNRNTVIALVVGLVVGFLIGQLASRRDQVTSVPVVAAPTGTPAMPAMPPGGMGGLPAPMPSPGASMDLQARITAAEQIVA
KDPRNVRAWIQLGNDYFDSRQAQKAVEAYGRALELEPNNPDVLTDQGVMYRDLGNFDKAIANFKKANEVDPKHVQSLFNL
GVVYLHDLQDADKAAKAWNQVISAAPTSPQAQQAQQALTQLKANPPPPKKK
>Mature_211_residues
MNRNTVIALVVGLVVGFLIGQLASRRDQVTSVPVVAAPTGTPAMPAMPPGGMGGLPAPMPSPGASMDLQARITAAEQIVA
KDPRNVRAWIQLGNDYFDSRQAQKAVEAYGRALELEPNNPDVLTDQGVMYRDLGNFDKAIANFKKANEVDPKHVQSLFNL
GVVYLHDLQDADKAAKAWNQVISAAPTSPQAQQAQQALTQLKANPPPPKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22583; Mature: 22583

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNTVIALVVGLVVGFLIGQLASRRDQVTSVPVVAAPTGTPAMPAMPPGGMGGLPAPMP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
SPGASMDLQARITAAEQIVAKDPRNVRAWIQLGNDYFDSRQAQKAVEAYGRALELEPNNP
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCC
DVLTDQGVMYRDLGNFDKAIANFKKANEVDPKHVQSLFNLGVVYLHDLQDADKAAKAWNQ
CEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VISAAPTSPQAQQAQQALTQLKANPPPPKKK
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNRNTVIALVVGLVVGFLIGQLASRRDQVTSVPVVAAPTGTPAMPAMPPGGMGGLPAPMP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
SPGASMDLQARITAAEQIVAKDPRNVRAWIQLGNDYFDSRQAQKAVEAYGRALELEPNNP
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCC
DVLTDQGVMYRDLGNFDKAIANFKKANEVDPKHVQSLFNLGVVYLHDLQDADKAAKAWNQ
CEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VISAAPTSPQAQQAQQALTQLKANPPPPKKK
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA