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The map label for this gene is glcA [H]

Identifier: 220918242

GI number: 220918242

Start: 3475413

End: 3476315

Strand: Direct

Name: glcA [H]

Synonym: A2cp1_3145

Alternate gene names: 220918242

Gene position: 3475413-3476315 (Clockwise)

Preceding gene: 220918241

Following gene: 220918244

Centisome position: 69.1

GC content: 74.97

Gene sequence:

>903_bases
GTGGACCCGCTGATCCGGCCCGCGATGGCCGCCGCGCTCGCCGTGGCGTGCGGGTGCGGCCTGCTCTCGCCGGGCGAGCC
GCCCGCCGCGCCCACCGCGCCGGTGCCCGGGTGGACGGCGCCGGACGCCCCCATCCCGGCGCCGCCGCCGCCCGCCGGCG
TGGCGCCGGAGGCGCCGCTCCCCGGCTACGCGCTCGCGTGGCACGACGAGTTCGACGGGACGGCGGTGGACCCGGCGCGC
TGGAACGTGGAGGCCCGCCACTGGCGCGACGCGCTCAACGACCCGGCGGCGGTCACCGTGCAGGATGGCCTGCTGCGGAT
CACGACCTTCACCGACGAGGCCGGCGTCCACCACACCGGATATCTCCAGACGGTCGGCCTGTTCGAGCTGACCTACGGCT
ACCTGGAGGCGCGCATCCGCTTCCACGAGGTGCCCGGCACCTGGTGCGCGTTCTGGCTCTACCCGGAGACGTACGGCCAC
CCCATCGGCGACCCCGGCACCGCCGGCGTGGAGATCGACGTCGTGGAGCACCGGGTGGTGGACGGCGGCGGCTGGAACGT
GCGCGACCTGGTGATGTCGGGCATCAACTGGGACGGCTTCGGCCCGGACTGGAAGAAGGTGCACCGGACCCAGCCGCCGC
CCGACGGCGGGCCGGTGTGGGGCGCGTGGCGCACCTTCTCGGTCCTCTGGACGCCCGCGGGCTACACGTTCTACGTGGAC
CAGCAGCCGCTCTGGAGCACCTCGGCCGCGGTGTCGCACCGGTCCCAGCCCATCTACCTCACCTGCGAGGTGAAGCAGCG
GAGCTGGGCCGGGACGATCCCCGCCGGCGGCTACGGACCCGCGGCGACGAGCGACGACTTCATGGAGGTGGACTGGGTGC
GCGCGTGGCAGCCGGCGCCCTGA

Upstream 100 bases:

>100_bases
CGCTGTTCGTCACGTACCGTGACGAGCTCGCGCTCGACCGGCTGCGCACCCCCGGCGTGAAGGATCGGCAGGGGCGCGGG
GCGCTCATGGCGGGGGCGGT

Downstream 100 bases:

>100_bases
CCGCGCGCCATCGGCTCACGGGGCCGGCGCCCGCGCCGCCGCGCGGATCCGGTCGCGCGCGGCGAAGCCGGGCCTCCCGG
CCGGGCGGGCGATGGGCGCG

Product: glycoside hydrolase family 16

Products: NA

Alternate protein names: (1->3)-beta-glucan endohydrolase; (1->3)-beta-glucanase A1 [H]

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MDPLIRPAMAAALAVACGCGLLSPGEPPAAPTAPVPGWTAPDAPIPAPPPPAGVAPEAPLPGYALAWHDEFDGTAVDPAR
WNVEARHWRDALNDPAAVTVQDGLLRITTFTDEAGVHHTGYLQTVGLFELTYGYLEARIRFHEVPGTWCAFWLYPETYGH
PIGDPGTAGVEIDVVEHRVVDGGGWNVRDLVMSGINWDGFGPDWKKVHRTQPPPDGGPVWGAWRTFSVLWTPAGYTFYVD
QQPLWSTSAAVSHRSQPIYLTCEVKQRSWAGTIPAGGYGPAATSDDFMEVDWVRAWQPAP

Sequences:

>Translated_300_residues
MDPLIRPAMAAALAVACGCGLLSPGEPPAAPTAPVPGWTAPDAPIPAPPPPAGVAPEAPLPGYALAWHDEFDGTAVDPAR
WNVEARHWRDALNDPAAVTVQDGLLRITTFTDEAGVHHTGYLQTVGLFELTYGYLEARIRFHEVPGTWCAFWLYPETYGH
PIGDPGTAGVEIDVVEHRVVDGGGWNVRDLVMSGINWDGFGPDWKKVHRTQPPPDGGPVWGAWRTFSVLWTPAGYTFYVD
QQPLWSTSAAVSHRSQPIYLTCEVKQRSWAGTIPAGGYGPAATSDDFMEVDWVRAWQPAP
>Mature_300_residues
MDPLIRPAMAAALAVACGCGLLSPGEPPAAPTAPVPGWTAPDAPIPAPPPPAGVAPEAPLPGYALAWHDEFDGTAVDPAR
WNVEARHWRDALNDPAAVTVQDGLLRITTFTDEAGVHHTGYLQTVGLFELTYGYLEARIRFHEVPGTWCAFWLYPETYGH
PIGDPGTAGVEIDVVEHRVVDGGGWNVRDLVMSGINWDGFGPDWKKVHRTQPPPDGGPVWGAWRTFSVLWTPAGYTFYVD
QQPLWSTSAAVSHRSQPIYLTCEVKQRSWAGTIPAGGYGPAATSDDFMEVDWVRAWQPAP

Specific function: Lysis of cellular walls containing beta-1,3-glucans. Implicated in the defense against fungal pathogens [H]

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR008263 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: =3.2.1.39 [H]

Molecular weight: Translated: 32494; Mature: 32494

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPLIRPAMAAALAVACGCGLLSPGEPPAAPTAPVPGWTAPDAPIPAPPPPAGVAPEAPL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGYALAWHDEFDGTAVDPARWNVEARHWRDALNDPAAVTVQDGLLRITTFTDEAGVHHTG
CCEEEEEECCCCCCEECHHHCCCCHHHHHHHHCCCCEEEEECCEEEEEEECCCCCCCCCC
YLQTVGLFELTYGYLEARIRFHEVPGTWCAFWLYPETYGHPIGDPGTAGVEIDVVEHRVV
HHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECHHHCCCCCCCCCCCCEEEEEEEEEEE
DGGGWNVRDLVMSGINWDGFGPDWKKVHRTQPPPDGGPVWGAWRTFSVLWTPAGYTFYVD
CCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEC
QQPLWSTSAAVSHRSQPIYLTCEVKQRSWAGTIPAGGYGPAATSDDFMEVDWVRAWQPAP
CCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MDPLIRPAMAAALAVACGCGLLSPGEPPAAPTAPVPGWTAPDAPIPAPPPPAGVAPEAPL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGYALAWHDEFDGTAVDPARWNVEARHWRDALNDPAAVTVQDGLLRITTFTDEAGVHHTG
CCEEEEEECCCCCCEECHHHCCCCHHHHHHHHCCCCEEEEECCEEEEEEECCCCCCCCCC
YLQTVGLFELTYGYLEARIRFHEVPGTWCAFWLYPETYGHPIGDPGTAGVEIDVVEHRVV
HHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECHHHCCCCCCCCCCCCEEEEEEEEEEE
DGGGWNVRDLVMSGINWDGFGPDWKKVHRTQPPPDGGPVWGAWRTFSVLWTPAGYTFYVD
CCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEC
QQPLWSTSAAVSHRSQPIYLTCEVKQRSWAGTIPAGGYGPAATSDDFMEVDWVRAWQPAP
CCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2311931 [H]