| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is cadC [C]
Identifier: 220918172
GI number: 220918172
Start: 3397736
End: 3398926
Strand: Direct
Name: cadC [C]
Synonym: A2cp1_3075
Alternate gene names: 220918172
Gene position: 3397736-3398926 (Clockwise)
Preceding gene: 220918171
Following gene: 220918175
Centisome position: 67.56
GC content: 77.25
Gene sequence:
>1191_bases ATGGGGCGCATGACCTGGCGGTTCGGAGCGTACGAGCTCGACCCGGCGCGGCGCGAGCTGCGCGTCGCCGGGGAGCCGAG GGCGCTCCAGCCGCAGGTCTTCGAGGTGCTCACCTACCTCGTCCGCAACCGGCATCGCCTGGTCGTGAAGGACGAGCTGC TGCGGGAGCTCTGGCCGGACGCGATCGTCACCGACGCGTCGCTGCAGCGCGCGGTGAGCCTCGCGCGCCGCGCGCTCCGC CCGGCGGATCGCGGCCTGCTGCGCACGCACGCGCGGCAGGGATACCGGTTCGTGGGCGAGGTCGTGGAGACCGAGCCGGA CCCGGCCGACACGGCGGCGGAGGCGCGCCCTGCCTACGTCCGCTCCGGCGACGTCCACGTGGCGTACCGCACCGCCGGAC ACGGTCCACTCGACGTGGTCCTGGTGCTCGGGTGGTCGCTGGGCATGCGCGCCGCCCTCGAGCTGCGGGGAGCGTCCGAG CTCGTCCGGGCGCTCTCCGCGCGCGCCCGCGTGATCCTGTTCGACAAGCGCGGGACGGGTGCGAGCGACCGCGTGAAGGC GTTGCCGGAGCTGCCGCAGCGGGTCGAGGACCTCGAGGCGGTCCTCGACGCGGTGCGGTCCCCGGGCGCCGTGCTCGTCG GGTTCTCCGAGGGTGGCCCGCTGGCGCTCACGTTCGCCGTGACCCGTCCGCTCCGCGTGCGCGGCCTCGCCCTCGTCGGC GCCTTCGCCCGCATGTCGGCCGCGCCGGACCACCCTGCCGGCTGGAGCGGGGCCGAGATCGCGTCGCTGCGCGCGTACAT CGCGCGGGGCTGGGGCGCCGGCGCGACGCTGCAGGCGATCGTTCCCGCCCGCCACCTCTCGGCGCCGCTCCGCGTCTGGG CCGCCCGGGCCGAGCAGGAGGGCGCGAGCCCCGGCGCGGCGCTCGAGCTCCTGGAGATGAACCTCGGGATCGACGTCCGG CCGCTGCTGGCGCGGGTGCGAGCGCCCGCCGTCGTGCTGCACGCGACCGGCGACCACGTCGTCCGCGTCGGGAACGGGCG CGCGCTCGCCGCGGAGATCCCCGGCGCACGCCTCGTCGAGGTCCCCGGCGAGGACCACGCGTTCCTGTTCGGCGGCCGGC CGACCCTCGAGCGCGAGCTCCTGGCGCTCCTCGCGCGGGCGGCCGCCCGGCCCCGGCCCGCGCTCACCTGA
Upstream 100 bases:
>100_bases CTGAGCCGCCGCCTCGGATCGGCTCGGTCCCGTCCGATCGCCCGCCCGCTCGCCGCCCTGGCGGGTCCTGCGCGGGCGGC GAGCGCGCTTCGCGCGCTAC
Downstream 100 bases:
>100_bases CCGCGACCGCGGCGATCTGCGAGCGGATCGGCAGGAGCGCCGTGCGCAGCGTGAACGGCGTGATCTCGACGGCGGCGAAC CCGGCTGCACGCAGGAGCCC
Product: transcriptional regulator, CadC
Products: NA
Alternate protein names: Transcriptional Regulator; Hydrolase; LuxR Family Transcriptional Regulator; Alpha/Beta Hydrolase Fold Protein; Transcriptional Regulator Domain Protein; Transcriptional Regulator SARP Family; Transcriptional Regulator Domain-Containing Protein; Lignin Peroxidase LipJ; Transcriptional Regulator LuxR Family; Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Regulatory Protein; Adenylate Cyclase; Carboxylesterase; Hydrolase Alpha/Beta Fold Family Protein; Adenylate/Guanylate Cyclase; Transcriptional Regulatory Protein-Like; Lysine Decarboxylase Transcriptional Regulator CadC; CadC Family Transcriptional Regulator; Hydrolase/Luxr Domain Protein; Transcriptional Regulator Winged Helix Family; SARP Family Transcriptional Regulator; Protein Kinase; Hydrolase And Adenylate/Guanylate Cyclase; Transcriptional Regulator CadC-Family; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MGRMTWRFGAYELDPARRELRVAGEPRALQPQVFEVLTYLVRNRHRLVVKDELLRELWPDAIVTDASLQRAVSLARRALR PADRGLLRTHARQGYRFVGEVVETEPDPADTAAEARPAYVRSGDVHVAYRTAGHGPLDVVLVLGWSLGMRAALELRGASE LVRALSARARVILFDKRGTGASDRVKALPELPQRVEDLEAVLDAVRSPGAVLVGFSEGGPLALTFAVTRPLRVRGLALVG AFARMSAAPDHPAGWSGAEIASLRAYIARGWGAGATLQAIVPARHLSAPLRVWAARAEQEGASPGAALELLEMNLGIDVR PLLARVRAPAVVLHATGDHVVRVGNGRALAAEIPGARLVEVPGEDHAFLFGGRPTLERELLALLARAAARPRPALT
Sequences:
>Translated_396_residues MGRMTWRFGAYELDPARRELRVAGEPRALQPQVFEVLTYLVRNRHRLVVKDELLRELWPDAIVTDASLQRAVSLARRALR PADRGLLRTHARQGYRFVGEVVETEPDPADTAAEARPAYVRSGDVHVAYRTAGHGPLDVVLVLGWSLGMRAALELRGASE LVRALSARARVILFDKRGTGASDRVKALPELPQRVEDLEAVLDAVRSPGAVLVGFSEGGPLALTFAVTRPLRVRGLALVG AFARMSAAPDHPAGWSGAEIASLRAYIARGWGAGATLQAIVPARHLSAPLRVWAARAEQEGASPGAALELLEMNLGIDVR PLLARVRAPAVVLHATGDHVVRVGNGRALAAEIPGARLVEVPGEDHAFLFGGRPTLERELLALLARAAARPRPALT >Mature_395_residues GRMTWRFGAYELDPARRELRVAGEPRALQPQVFEVLTYLVRNRHRLVVKDELLRELWPDAIVTDASLQRAVSLARRALRP ADRGLLRTHARQGYRFVGEVVETEPDPADTAAEARPAYVRSGDVHVAYRTAGHGPLDVVLVLGWSLGMRAALELRGASEL VRALSARARVILFDKRGTGASDRVKALPELPQRVEDLEAVLDAVRSPGAVLVGFSEGGPLALTFAVTRPLRVRGLALVGA FARMSAAPDHPAGWSGAEIASLRAYIARGWGAGATLQAIVPARHLSAPLRVWAARAEQEGASPGAALELLEMNLGIDVRP LLARVRAPAVVLHATGDHVVRVGNGRALAAEIPGARLVEVPGEDHAFLFGGRPTLERELLALLARAAARPRPALT
Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42651; Mature: 42520
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRMTWRFGAYELDPARRELRVAGEPRALQPQVFEVLTYLVRNRHRLVVKDELLRELWPD CCCCEEECCCEECCHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCCC AIVTDASLQRAVSLARRALRPADRGLLRTHARQGYRFVGEVVETEPDPADTAAEARPAYV HHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEE RSGDVHVAYRTAGHGPLDVVLVLGWSLGMRAALELRGASELVRALSARARVILFDKRGTG ECCCEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCC ASDRVKALPELPQRVEDLEAVLDAVRSPGAVLVGFSEGGPLALTFAVTRPLRVRGLALVG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHH AFARMSAAPDHPAGWSGAEIASLRAYIARGWGAGATLQAIVPARHLSAPLRVWAARAEQE HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCHHHCCCHHHHHHHHHHHC GASPGAALELLEMNLGIDVRPLLARVRAPAVVLHATGDHVVRVGNGRALAAEIPGARLVE CCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCEEEEECCCEEEEEECCCCEEEE VPGEDHAFLFGGRPTLERELLALLARAAARPRPALT CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GRMTWRFGAYELDPARRELRVAGEPRALQPQVFEVLTYLVRNRHRLVVKDELLRELWPD CCCEEECCCEECCHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCCC AIVTDASLQRAVSLARRALRPADRGLLRTHARQGYRFVGEVVETEPDPADTAAEARPAYV HHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEE RSGDVHVAYRTAGHGPLDVVLVLGWSLGMRAALELRGASELVRALSARARVILFDKRGTG ECCCEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCC ASDRVKALPELPQRVEDLEAVLDAVRSPGAVLVGFSEGGPLALTFAVTRPLRVRGLALVG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHH AFARMSAAPDHPAGWSGAEIASLRAYIARGWGAGATLQAIVPARHLSAPLRVWAARAEQE HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCHHHCCCHHHHHHHHHHHC GASPGAALELLEMNLGIDVRPLLARVRAPAVVLHATGDHVVRVGNGRALAAEIPGARLVE CCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCEEEEECCCEEEEEECCCCEEEE VPGEDHAFLFGGRPTLERELLALLARAAARPRPALT CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA