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The map label for this gene is istA [H]

Identifier: 220918155

GI number: 220918155

Start: 3384428

End: 3385705

Strand: Direct

Name: istA [H]

Synonym: A2cp1_3058

Alternate gene names: 220918155

Gene position: 3384428-3385705 (Clockwise)

Preceding gene: 220918153

Following gene: 220918156

Centisome position: 67.29

GC content: 70.97

Gene sequence:

>1278_bases
ATGGGCAGCGAGATGGGATTCGTGGCACCCCCGACGACGGAGGTGCCGATGGTCGAGGCGGAGGCGGTCAGGCAGATGCG
TGACCTCGCGGGTAAGGGCTGGGGCGCGAAGCGGATCGCGCGCGAACTCGGCGTGGCTCGCAACACGGTGCGTCGGTACC
TGCGCGGCGCGGTGGCCGATCTCCAACGGCACCCTTCACAGCAGCGGCTCGACGACGTCCGGCGAGCTGAAGCGGTCGCG
CTATTCGAGGGCGAGGCCGAGGGCAACGCCGTGGTCGTCGCGCAGATGCTCGGTGAGCGCGGCGTTGAGGCGAGCGTGAG
GACCGTGCAGCGTGCCGTGGCGGACCGCCGGCGCGAGCAGCGCGCCGCCGACGTTGCGACGGTCCGGTTCGAGACCGCGC
CGGGCCGGCAGATGCAGATCGACTTCGGCGAGCGCCAGGTCTGGATCGCCGACGAGCGCGTGACGGTGCACTTCCTGGCG
GCGGTGTTGAGCTACTCGCGGCGGATCTTCGTGAAGGCGTTCCTGCACGAGCGTCAGGGCGAGTGGCTCGACGGGATCGC
GTCGGCGTTCCGCCACTTCGGCGGCGTGCCGCTCGAGGTTCTCGGCGACAACACGCGCTGCCTCGTCGCCGGCCGCAACC
GAGAGGCGCAGACCGTGATCTTCCACCCGGCGTATGTCGCGTTCTGCCGCGATTGGGATGTTCAGCCGCGCGCCTGCCAG
CCATACCGCGCCAGGACCAAGGGTAAGACCGAGTCCGGCGTGAAGTACGTGAAGCGAAACGCGATCGCCGGTCGGCGGTT
TAACTCGTTCGCGCACCTGCAGGACCACCTATCCGCGTGGCAGCTCCTCGTGGACGGCCGCGTGCACGGGACGACGCACG
AGGCACCTGCGAAACGCTTCGAGCGCGACGAGCGCGAGGCACTGAGGTCGCTGCCCGCGCGGCCGCTCCCGACGCACGGC
CGTCGCCTGCAGCGGCGCGTCGCGAACGACTCGCTCATCGACATCGACACGGTCCGCTACAGCGTTCCGCACCGCCTCGT
GCGCGACCGCGTCGAGGCGCTCGTCACCGCCGACGAGGTTCGCATCTTCCACGGCCGCGACGTCGTAGCGGTTCACGCGC
GCTCGTTCGAGCCGCACGCGCGGGTGATCGACCCGGCCCACCTCGACGGCCTCTGGCGCCGGCCTGCGGCTGAGAACCTC
GTTCCCATCGCGCAGCCGCTCGCCGCGCTCGGACGGACGCTCGACGACTACGCGGCCGTGATCGGCGGTGCCGCGTGA

Upstream 100 bases:

>100_bases
CTAGCCTCCCCCACCCCGCGTTCGTGTGTAGAGCGACAGGATAACTGACCCCCTTGCGACACAACTTCTGACCCCCTCTG
CCCTCAGCAAGGAGGCGGAG

Downstream 100 bases:

>100_bases
GCACCGAGATCACGCGGGCTCGCGTCCTCGAGAGCCTCGGCCTGCTCCGCCTCGGGCGCATCGGCGAGCAGCTCGACGCG
TTGCTCTCGACCGCGGCACG

Product: Integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MGSEMGFVAPPTTEVPMVEAEAVRQMRDLAGKGWGAKRIARELGVARNTVRRYLRGAVADLQRHPSQQRLDDVRRAEAVA
LFEGEAEGNAVVVAQMLGERGVEASVRTVQRAVADRRREQRAADVATVRFETAPGRQMQIDFGERQVWIADERVTVHFLA
AVLSYSRRIFVKAFLHERQGEWLDGIASAFRHFGGVPLEVLGDNTRCLVAGRNREAQTVIFHPAYVAFCRDWDVQPRACQ
PYRARTKGKTESGVKYVKRNAIAGRRFNSFAHLQDHLSAWQLLVDGRVHGTTHEAPAKRFERDEREALRSLPARPLPTHG
RRLQRRVANDSLIDIDTVRYSVPHRLVRDRVEALVTADEVRIFHGRDVVAVHARSFEPHARVIDPAHLDGLWRRPAAENL
VPIAQPLAALGRTLDDYAAVIGGAA

Sequences:

>Translated_425_residues
MGSEMGFVAPPTTEVPMVEAEAVRQMRDLAGKGWGAKRIARELGVARNTVRRYLRGAVADLQRHPSQQRLDDVRRAEAVA
LFEGEAEGNAVVVAQMLGERGVEASVRTVQRAVADRRREQRAADVATVRFETAPGRQMQIDFGERQVWIADERVTVHFLA
AVLSYSRRIFVKAFLHERQGEWLDGIASAFRHFGGVPLEVLGDNTRCLVAGRNREAQTVIFHPAYVAFCRDWDVQPRACQ
PYRARTKGKTESGVKYVKRNAIAGRRFNSFAHLQDHLSAWQLLVDGRVHGTTHEAPAKRFERDEREALRSLPARPLPTHG
RRLQRRVANDSLIDIDTVRYSVPHRLVRDRVEALVTADEVRIFHGRDVVAVHARSFEPHARVIDPAHLDGLWRRPAAENL
VPIAQPLAALGRTLDDYAAVIGGAA
>Mature_424_residues
GSEMGFVAPPTTEVPMVEAEAVRQMRDLAGKGWGAKRIARELGVARNTVRRYLRGAVADLQRHPSQQRLDDVRRAEAVAL
FEGEAEGNAVVVAQMLGERGVEASVRTVQRAVADRRREQRAADVATVRFETAPGRQMQIDFGERQVWIADERVTVHFLAA
VLSYSRRIFVKAFLHERQGEWLDGIASAFRHFGGVPLEVLGDNTRCLVAGRNREAQTVIFHPAYVAFCRDWDVQPRACQP
YRARTKGKTESGVKYVKRNAIAGRRFNSFAHLQDHLSAWQLLVDGRVHGTTHEAPAKRFERDEREALRSLPARPLPTHGR
RLQRRVANDSLIDIDTVRYSVPHRLVRDRVEALVTADEVRIFHGRDVVAVHARSFEPHARVIDPAHLDGLWRRPAAENLV
PIAQPLAALGRTLDDYAAVIGGAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 47652; Mature: 47521

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSEMGFVAPPTTEVPMVEAEAVRQMRDLAGKGWGAKRIARELGVARNTVRRYLRGAVAD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQRHPSQQRLDDVRRAEAVALFEGEAEGNAVVVAQMLGERGVEASVRTVQRAVADRRREQ
HHHCCCHHHHHHHHHHHHEEEEECCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RAADVATVRFETAPGRQMQIDFGERQVWIADERVTVHFLAAVLSYSRRIFVKAFLHERQG
HHHHHEEEEEECCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
EWLDGIASAFRHFGGVPLEVLGDNTRCLVAGRNREAQTVIFHPAYVAFCRDWDVQPRACQ
CHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCEEEECHHHHHHHHCCCCCCCCCC
PYRARTKGKTESGVKYVKRNAIAGRRFNSFAHLQDHLSAWQLLVDGRVHGTTHEAPAKRF
CHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH
ERDEREALRSLPARPLPTHGRRLQRRVANDSLIDIDTVRYSVPHRLVRDRVEALVTADEV
CHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHE
RIFHGRDVVAVHARSFEPHARVIDPAHLDGLWRRPAAENLVPIAQPLAALGRTLDDYAAV
EEEECCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHH
IGGAA
HCCCC
>Mature Secondary Structure 
GSEMGFVAPPTTEVPMVEAEAVRQMRDLAGKGWGAKRIARELGVARNTVRRYLRGAVAD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQRHPSQQRLDDVRRAEAVALFEGEAEGNAVVVAQMLGERGVEASVRTVQRAVADRRREQ
HHHCCCHHHHHHHHHHHHEEEEECCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RAADVATVRFETAPGRQMQIDFGERQVWIADERVTVHFLAAVLSYSRRIFVKAFLHERQG
HHHHHEEEEEECCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
EWLDGIASAFRHFGGVPLEVLGDNTRCLVAGRNREAQTVIFHPAYVAFCRDWDVQPRACQ
CHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCEEEECHHHHHHHHCCCCCCCCCC
PYRARTKGKTESGVKYVKRNAIAGRRFNSFAHLQDHLSAWQLLVDGRVHGTTHEAPAKRF
CHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH
ERDEREALRSLPARPLPTHGRRLQRRVANDSLIDIDTVRYSVPHRLVRDRVEALVTADEV
CHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHE
RIFHGRDVVAVHARSFEPHARVIDPAHLDGLWRRPAAENLVPIAQPLAALGRTLDDYAAV
EEEECCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHH
IGGAA
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2540414 [H]