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The map label for this gene is glcF [H]

Identifier: 220918142

GI number: 220918142

Start: 3367853

End: 3369169

Strand: Reverse

Name: glcF [H]

Synonym: A2cp1_3045

Alternate gene names: 220918142

Gene position: 3369169-3367853 (Counterclockwise)

Preceding gene: 220918143

Following gene: 220918141

Centisome position: 66.99

GC content: 77.68

Gene sequence:

>1317_bases
ATGGGCGCGGGAGCGGACAGGGCGCAGCCCGCGGCGTCCCCGGCGCGGGGCGCGGCGCGCACGCCGGCGGACGAGTGCGT
GCACTGCGGCTTCTGCCTGCCGGTCTGCCCGACGTGGCAGAGCTGGCAGGAGGAGATGGACTCGCCGCGCGGCCGCATCG
ACCTCTTCCGCGGGCTGCAGGAGGGCGAGCTGGCCATGTCGGACGCGGTGGCGGCGCACTTCGACCGCTGCCTGGGCTGC
ATGGCGTGCCTGGGCGCCTGCCCGTCCGGCGTCCGGTACGACCACGTCATCGACGCGGCCCGAGCGCGGGTGGAGCGGGA
GCACCGGCGTCCCGCGCTCGATCGGCTGCACCGCGCGCTCGTGTTCTCGCTGTTCCCGCACCCGGGGCGGCTGCGCGTCG
CGGCGCTGCTGCTGTGGGTGTGGCGGGTGAGCGGGCTCCGCTGGCTGGTCCGCCGGACCGGGCTGCTGCGCCTCTCGCGG
CGGCTCGAGCAGCTCGAGGCGCTGGCGCCGCCGCTGGCGCTGCGCGACGTGCTGGCCACCACCCCGCAGGCCACCGGCGC
GCACGGCGAGCGGCGCCTGCGCGTGGGCCTGGTGACCGGCTGCGTGCAGAAGGTGTTCTTCCCCGGCGTGAACGCAGCCA
CCGTCCGCGTGCTCGCGGCCGAGGGGGTGGAGGTCCTCGCGCCCGCGGGCCAGGGCTGCTGCGGCGCGCTGTCGGTCCAC
GCGGGCCGGCTCGATGAGGCGCGGCGGCTGGCGCGGGCGCTGGTGGAGCGCTTCGAGGGGCTGCCCCTCGACGCGATCGT
GGTGAACGCGGCGGGCTGCGGCTCGCACCTGAAGGACCTCGCGCACCTGTTCGAGGACGATCCGGCGTTCGCGCCGAGGG
CGGCCGCGTTCTCGGCCCGGGTGCGCGACGCGTCGGAGCTGCTCGCCGGGCTGTCGCCCCGGGCGCCGCGCGCCCCGCTG
GCTGCGCGGGTGGCCTACCACTCGCCCTGCCACCTCCAGCACGCGCAGGGCGTGGGCGGCGCGCCGCGGGCCCTGCTCGC
CACCATCCCGGGCCTCGAGCTCGTCGAGATCGCCGACGGAGACCAGTGCTGCGGCTCGGCGGGCATCTACAACCTGGTGC
AGCCGGAGAGCGCGTCGGAGATCGGGCGGCGCAAGGCGGACGCGGTGATGGCGACGGGCGCGACCGTGCTCGCGAGCGCG
AACCCGGGCTGCACGCTGCACGTCCGCCGGCTGCTCGAGGAGCGGGGGGCGGGCATCGAGCCGGCGCACCCGCTCGAGCT
GCTGGACCGCGCCATCCGGGCGGCGCGGCGCGGGTGA

Upstream 100 bases:

>100_bases
GGGCGCTGCGCCGGCCGGGCTCGAGCTGATGCGGCGCCTGAAGCGGGAGCTCGACCCGGAGCACCGGCTCGCGCCGGGCC
GCCTGCCAGGAGGGATCTGA

Downstream 100 bases:

>100_bases
GGCGAGCCCGGCCCGGCGCCGGGGAGGAGGCGCGGTGCTCGACGAGGCGGTGGCGCGTTGCCGGGCGGAGGTCGAGGCGC
TGGCGGTCCGCGGCCTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MGAGADRAQPAASPARGAARTPADECVHCGFCLPVCPTWQSWQEEMDSPRGRIDLFRGLQEGELAMSDAVAAHFDRCLGC
MACLGACPSGVRYDHVIDAARARVEREHRRPALDRLHRALVFSLFPHPGRLRVAALLLWVWRVSGLRWLVRRTGLLRLSR
RLEQLEALAPPLALRDVLATTPQATGAHGERRLRVGLVTGCVQKVFFPGVNAATVRVLAAEGVEVLAPAGQGCCGALSVH
AGRLDEARRLARALVERFEGLPLDAIVVNAAGCGSHLKDLAHLFEDDPAFAPRAAAFSARVRDASELLAGLSPRAPRAPL
AARVAYHSPCHLQHAQGVGGAPRALLATIPGLELVEIADGDQCCGSAGIYNLVQPESASEIGRRKADAVMATGATVLASA
NPGCTLHVRRLLEERGAGIEPAHPLELLDRAIRAARRG

Sequences:

>Translated_438_residues
MGAGADRAQPAASPARGAARTPADECVHCGFCLPVCPTWQSWQEEMDSPRGRIDLFRGLQEGELAMSDAVAAHFDRCLGC
MACLGACPSGVRYDHVIDAARARVEREHRRPALDRLHRALVFSLFPHPGRLRVAALLLWVWRVSGLRWLVRRTGLLRLSR
RLEQLEALAPPLALRDVLATTPQATGAHGERRLRVGLVTGCVQKVFFPGVNAATVRVLAAEGVEVLAPAGQGCCGALSVH
AGRLDEARRLARALVERFEGLPLDAIVVNAAGCGSHLKDLAHLFEDDPAFAPRAAAFSARVRDASELLAGLSPRAPRAPL
AARVAYHSPCHLQHAQGVGGAPRALLATIPGLELVEIADGDQCCGSAGIYNLVQPESASEIGRRKADAVMATGATVLASA
NPGCTLHVRRLLEERGAGIEPAHPLELLDRAIRAARRG
>Mature_437_residues
GAGADRAQPAASPARGAARTPADECVHCGFCLPVCPTWQSWQEEMDSPRGRIDLFRGLQEGELAMSDAVAAHFDRCLGCM
ACLGACPSGVRYDHVIDAARARVEREHRRPALDRLHRALVFSLFPHPGRLRVAALLLWVWRVSGLRWLVRRTGLLRLSRR
LEQLEALAPPLALRDVLATTPQATGAHGERRLRVGLVTGCVQKVFFPGVNAATVRVLAAEGVEVLAPAGQGCCGALSVHA
GRLDEARRLARALVERFEGLPLDAIVVNAAGCGSHLKDLAHLFEDDPAFAPRAAAFSARVRDASELLAGLSPRAPRAPLA
ARVAYHSPCHLQHAQGVGGAPRALLATIPGLELVEIADGDQCCGSAGIYNLVQPESASEIGRRKADAVMATGATVLASAN
PGCTLHVRRLLEERGAGIEPAHPLELLDRAIRAARRG

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=392, Percent_Identity=33.1632653061224, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1786497, Length=237, Percent_Identity=28.2700421940928, Blast_Score=101, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 46694; Mature: 46563

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGADRAQPAASPARGAARTPADECVHCGFCLPVCPTWQSWQEEMDSPRGRIDLFRGLQ
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCC
EGELAMSDAVAAHFDRCLGCMACLGACPSGVRYDHVIDAARARVEREHRRPALDRLHRAL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VFSLFPHPGRLRVAALLLWVWRVSGLRWLVRRTGLLRLSRRLEQLEALAPPLALRDVLAT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
TPQATGAHGERRLRVGLVTGCVQKVFFPGVNAATVRVLAAEGVEVLAPAGQGCCGALSVH
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCCCCCHHHHHHH
AGRLDEARRLARALVERFEGLPLDAIVVNAAGCGSHLKDLAHLFEDDPAFAPRAAAFSAR
CCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
VRDASELLAGLSPRAPRAPLAARVAYHSPCHLQHAQGVGGAPRALLATIPGLELVEIADG
HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHCCCCCCCCHHHHHHCCCCEEEEECCC
DQCCGSAGIYNLVQPESASEIGRRKADAVMATGATVLASANPGCTLHVRRLLEERGAGIE
CHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCC
PAHPLELLDRAIRAARRG
CCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GAGADRAQPAASPARGAARTPADECVHCGFCLPVCPTWQSWQEEMDSPRGRIDLFRGLQ
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCC
EGELAMSDAVAAHFDRCLGCMACLGACPSGVRYDHVIDAARARVEREHRRPALDRLHRAL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VFSLFPHPGRLRVAALLLWVWRVSGLRWLVRRTGLLRLSRRLEQLEALAPPLALRDVLAT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
TPQATGAHGERRLRVGLVTGCVQKVFFPGVNAATVRVLAAEGVEVLAPAGQGCCGALSVH
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCCCCCHHHHHHH
AGRLDEARRLARALVERFEGLPLDAIVVNAAGCGSHLKDLAHLFEDDPAFAPRAAAFSAR
CCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
VRDASELLAGLSPRAPRAPLAARVAYHSPCHLQHAQGVGGAPRALLATIPGLELVEIADG
HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHCCCCCCCCHHHHHHCCCCEEEEECCC
DQCCGSAGIYNLVQPESASEIGRRKADAVMATGATVLASANPGCTLHVRRLLEERGAGIE
CHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCC
PAHPLELLDRAIRAARRG
CCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]