Click here to switch to the map view.

The map label for this gene is gspE [C]

Identifier: 220918106

GI number: 220918106

Start: 3332847

End: 3334184

Strand: Direct

Name: gspE [C]

Synonym: A2cp1_3009

Alternate gene names: 220918106

Gene position: 3332847-3334184 (Clockwise)

Preceding gene: 220918105

Following gene: 220918107

Centisome position: 66.27

GC content: 69.28

Gene sequence:

>1338_bases
ATGCGACTGAGTGACCGGCTGCGGCAGGGACCGGTGGCGGACCCCCCGCAGAACGAGCCCGCGGTGGCGAGCGAGGCCTT
CCGGGACATGAAGGGCGACCTCCACCGCCGCCTGGTGGACCGGCTCGACCTGAAGGCGCTCGAGCGCCTTCCCGCAGAGC
GACTCCAGGACGAGCTGCGCGGCATCGTGGCCGGGATGGTGAGCGGCGCCGGGGTACCGCTCAACCAGGCAGAGCGTGAC
CGGCTGGTCCAGGAGATCCTTGACGAGGTGACGGGGCTCGGTCCGCTCGAGCCGCTGCTCGCGGATGGCTCCATCTCCGA
CATCCTGGTGAACACGGCCGAGACGGTCTACGTCGAGCGGAACGGCAAGCTCGAGCTGACGCGCGTGCGCTTCGACTCCA
ACGACCACCTCATGCAGGTGATCAACCGGATCGTCTCGCGCGTCGGGCGGCGCGTGGACGAGACGTCACCGATGGTCGAC
GCACGCCTGCCGGACGGCTCGCGCGTCAACGCGATCATCCCGCCCCTCGCCATCGACGGCGCCATCCTCTCGATCCGCCG
GTTCGGGCGCTCGCCGCTTCGCGTCCGCGACCTGCTCACGATCGGCTCCGTCACGCGTGAGGCCGTCTCCTTCCTCGCCG
CGTGCGTCACCGCCAGGCTGAACGTCCTCGTCAGCGGGGGCACCGGCAGCGGCAAGACGACCATGCTGAACGCGCTGTCC
GCGTTCATCCCGCCCTCCGAGCGCATCGTCACGATCGAGGATTCGGCCGAGCTGCAGCTCCAGCAGCCGCACGTGGTCCG
GCTGGAGACCCGGCCGCCCAACATCGAGGGCAAGGGCGAGATCATCGCGCGCGACCTGGTGCGGAACTCGCTCCGAATGC
GGCCGGACCGGATCATCGTCGGCGAGGTCCGGAGCTCGGAGGTCCTCGACATGCTCCAAGCCATGAACACCGGCCACGAC
GGCTCGATGACCACGATCCACGCGAACTCTCCGCGGGACGCGCTCACGCGTCTCGAGGCGATGATCGCGATGGGCGGGAT
CCAGCTCCCCGAGGCGGCCAGCCGGCAGATGATCTCGCGGGCCATCAACATCATCGTCCAGCTCAACCGCGGCGCGGACG
GGCACCGCCGGCTCGTCAGCGTGGGCGAGATCACGGGGACCGAGGGGCCCACCATCACGATGCAGGAGATCTTCCGGTTC
GACCAGAAGGGCGTGGACGAGCGCGGCAAGATCGTCGGCCAGCTCGTCGCGACCGGGATCCGGCCGAAGGTGATGAACCG
CATCCAGGTGTCCGGGATCGACGTCGCCCACATCCTCGATCCCTTCCTGCAGGACTGA

Upstream 100 bases:

>100_bases
GACCTCCTGAAGGTGGTCGGCCACGTGCGCGCCGAGCCGGCGGCGGAGCCGCGCGAACGGCGTTCGCTGTTCAAGAAGCT
CCTGACCCTGAGGACGAGCG

Downstream 100 bases:

>100_bases
CCATGCGCGAGATGCTCGCCTTCCTCAGCGCCGTCGCCTTCGTCGCCCTCCTCGAGGGCGCGCGGCAGCTCTACCGCTTC
ACGGTGGAGAAGAAGAAGGA

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MRLSDRLRQGPVADPPQNEPAVASEAFRDMKGDLHRRLVDRLDLKALERLPAERLQDELRGIVAGMVSGAGVPLNQAERD
RLVQEILDEVTGLGPLEPLLADGSISDILVNTAETVYVERNGKLELTRVRFDSNDHLMQVINRIVSRVGRRVDETSPMVD
ARLPDGSRVNAIIPPLAIDGAILSIRRFGRSPLRVRDLLTIGSVTREAVSFLAACVTARLNVLVSGGTGSGKTTMLNALS
AFIPPSERIVTIEDSAELQLQQPHVVRLETRPPNIEGKGEIIARDLVRNSLRMRPDRIIVGEVRSSEVLDMLQAMNTGHD
GSMTTIHANSPRDALTRLEAMIAMGGIQLPEAASRQMISRAINIIVQLNRGADGHRRLVSVGEITGTEGPTITMQEIFRF
DQKGVDERGKIVGQLVATGIRPKVMNRIQVSGIDVAHILDPFLQD

Sequences:

>Translated_445_residues
MRLSDRLRQGPVADPPQNEPAVASEAFRDMKGDLHRRLVDRLDLKALERLPAERLQDELRGIVAGMVSGAGVPLNQAERD
RLVQEILDEVTGLGPLEPLLADGSISDILVNTAETVYVERNGKLELTRVRFDSNDHLMQVINRIVSRVGRRVDETSPMVD
ARLPDGSRVNAIIPPLAIDGAILSIRRFGRSPLRVRDLLTIGSVTREAVSFLAACVTARLNVLVSGGTGSGKTTMLNALS
AFIPPSERIVTIEDSAELQLQQPHVVRLETRPPNIEGKGEIIARDLVRNSLRMRPDRIIVGEVRSSEVLDMLQAMNTGHD
GSMTTIHANSPRDALTRLEAMIAMGGIQLPEAASRQMISRAINIIVQLNRGADGHRRLVSVGEITGTEGPTITMQEIFRF
DQKGVDERGKIVGQLVATGIRPKVMNRIQVSGIDVAHILDPFLQD
>Mature_445_residues
MRLSDRLRQGPVADPPQNEPAVASEAFRDMKGDLHRRLVDRLDLKALERLPAERLQDELRGIVAGMVSGAGVPLNQAERD
RLVQEILDEVTGLGPLEPLLADGSISDILVNTAETVYVERNGKLELTRVRFDSNDHLMQVINRIVSRVGRRVDETSPMVD
ARLPDGSRVNAIIPPLAIDGAILSIRRFGRSPLRVRDLLTIGSVTREAVSFLAACVTARLNVLVSGGTGSGKTTMLNALS
AFIPPSERIVTIEDSAELQLQQPHVVRLETRPPNIEGKGEIIARDLVRNSLRMRPDRIIVGEVRSSEVLDMLQAMNTGHD
GSMTTIHANSPRDALTRLEAMIAMGGIQLPEAASRQMISRAINIIVQLNRGADGHRRLVSVGEITGTEGPTITMQEIFRF
DQKGVDERGKIVGQLVATGIRPKVMNRIQVSGIDVAHILDPFLQD

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=122, Percent_Identity=39.344262295082, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 48734; Mature: 48734

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSDRLRQGPVADPPQNEPAVASEAFRDMKGDLHRRLVDRLDLKALERLPAERLQDELR
CCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GIVAGMVSGAGVPLNQAERDRLVQEILDEVTGLGPLEPLLADGSISDILVNTAETVYVER
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCCEEEEEEC
NGKLELTRVRFDSNDHLMQVINRIVSRVGRRVDETSPMVDARLPDGSRVNAIIPPLAIDG
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEECCCHHHHH
AILSIRRFGRSPLRVRDLLTIGSVTREAVSFLAACVTARLNVLVSGGTGSGKTTMLNALS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHH
AFIPPSERIVTIEDSAELQLQQPHVVRLETRPPNIEGKGEIIARDLVRNSLRMRPDRIIV
HHCCCCCCEEEEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
GEVRSSEVLDMLQAMNTGHDGSMTTIHANSPRDALTRLEAMIAMGGIQLPEAASRQMISR
ECCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AINIIVQLNRGADGHRRLVSVGEITGTEGPTITMQEIFRFDQKGVDERGKIVGQLVATGI
HHHHEEEECCCCCHHHHHEEHHCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCC
RPKVMNRIQVSGIDVAHILDPFLQD
CHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRLSDRLRQGPVADPPQNEPAVASEAFRDMKGDLHRRLVDRLDLKALERLPAERLQDELR
CCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GIVAGMVSGAGVPLNQAERDRLVQEILDEVTGLGPLEPLLADGSISDILVNTAETVYVER
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCCEEEEEEC
NGKLELTRVRFDSNDHLMQVINRIVSRVGRRVDETSPMVDARLPDGSRVNAIIPPLAIDG
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEECCCHHHHH
AILSIRRFGRSPLRVRDLLTIGSVTREAVSFLAACVTARLNVLVSGGTGSGKTTMLNALS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHH
AFIPPSERIVTIEDSAELQLQQPHVVRLETRPPNIEGKGEIIARDLVRNSLRMRPDRIIV
HHCCCCCCEEEEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
GEVRSSEVLDMLQAMNTGHDGSMTTIHANSPRDALTRLEAMIAMGGIQLPEAASRQMISR
ECCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AINIIVQLNRGADGHRRLVSVGEITGTEGPTITMQEIFRFDQKGVDERGKIVGQLVATGI
HHHHEEEECCCCCHHHHHEEHHCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCC
RPKVMNRIQVSGIDVAHILDPFLQD
CHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]