| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918094
Identifier: 220918094
GI number: 220918094
Start: 3320579
End: 3321946
Strand: Direct
Name: 220918094
Synonym: A2cp1_2997
Alternate gene names: NA
Gene position: 3320579-3321946 (Clockwise)
Preceding gene: 220918091
Following gene: 220918095
Centisome position: 66.02
GC content: 77.56
Gene sequence:
>1368_bases ATGGCCTCGACCCACCGTGCGGCGCTCGCCGCGCTCGCCCTCCTCACCGCCACCGCCGCCTGCGACCAGGCTCGCCCGAC GCTCGGCGAGGCCGACGCCGGCGCGGAGGGCGACTGCACCTCCTGCCACGGCGACGCGACCCGCACCGAGGCGAGCGCGC TGCTCCAGGCGGCTCCGCCGCGCGACGCCCACGGCAGCGCCAGCGGGCCGGCGGTCGGCGCGCACCAGGCCCACCTGCAC GCGACCGCGGTCTCCGGGCCGATCGCCTGCGCCGAGTGCCACGCCGTGCCCACGCAGCGGCTCCACTCGAACGGCCAGGT GGACCTCGCCTTCGGCGCGCTCGCCCGGGCCGGCGGCGCGTCGCCGGCGTTCGCGGGCGGCACCTGCTCCGGCGTCTACT GCCACGGCGCGACGCTCTCCGGCGGGAGCCTCACCGCGCCGGTCTGGGGCAGCGCCGGGCCGCTGGACTGCGCGAGCTGC CACGGCGCGCCTCCGCCGTCGCACGCCGCCGGCGCCACCGCCTGCGCCACCTGCCACCCCGGCACCGTCGACGCCGACGG CACGCTGAACCTCGCCGGCGGACTGCACCTGAACGGCGTGGTGGACGTGAACGGCGCGCACCCCGAGGGCTGGTCGGATC CGTCGCAGCACGGCCGCGCCGCGAAGCGCGATCTCTCGAGCTGCACCGCCTGCCACGGCGCCGACTACGGCGGCGGGACC TCCGGCGTGTCCTGCAACGCCTGCCACGGCGGCACCGCCTGGCAGTCGAACTGCACCTTCTGCCACGGCACCAAGGTCGC GGCATACGCCGCCGCCGACCTGCCGAAGGCCGCGCCGCCGCTCGGCACGCAGGGCGAGACGGCCGTCACCGACCGCGCCG TCGGTGCGCACCAGAAGCACCTCCTCGCCACCCTGTCCTCGCCGCTCGCGTGCGCCGAGTGCCACGCCGTCCCCGCCGAC CTCGGCCACCTCGACGGCGCCGCGCAGGTGACGTTCGGCGTCGCCGCCCGCCGGAACGGGGCCGCGCCGGCGTGGAACGG GACCACCTGCGCGTCCACCTACTGCCACGGCTCCACCGCGGGCGCCGCCGCACCGGCGCCGGCCTGGACCTCGACGGCCG GCACCACCTGCGCCTCCTGCCACCTGCCGCAGAGCGGGAGCGGAACGTCCGCTTACTCCGGGCGACACTACCTGCACGTC TCCAGCCGCGGGATCTCCTGCGCGACGTGCCACGGGTCCGGGTACACTGCGAGCGCCGTCGTGCCGGCCACCCACGTGGA CGGGACGCGGCAATTGCAGCCCATCGTCGGCTGGAACGCGGCCTCCCGGAGCTGTGCGCCGGGGTGCCACGGCGGCGAGA CCTGGTAG
Upstream 100 bases:
>100_bases GACCGGCACCCCCGAACGTGGCGCCATGGCCGCCGCCCGCCCACGGTCCGGTGCTCCAGCGCCGGGTCCTGGTCCCCGGG CCGCCGCCCGGAGACGAACC
Downstream 100 bases:
>100_bases CGGACCGGCCGGCAGCCACCGGAACGCGACGCGCCCGAGGGCACCCGGCGCCCGAGCCGCGCATCCTGCGGTCGGGTGAC GCGTCCCTTGCGCACGGTCA
Product: cytochrome C family protein
Products: NA
Alternate protein names: Multihaem Cytochrome; Cytochrome C Like Protein
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MASTHRAALAALALLTATAACDQARPTLGEADAGAEGDCTSCHGDATRTEASALLQAAPPRDAHGSASGPAVGAHQAHLH ATAVSGPIACAECHAVPTQRLHSNGQVDLAFGALARAGGASPAFAGGTCSGVYCHGATLSGGSLTAPVWGSAGPLDCASC HGAPPPSHAAGATACATCHPGTVDADGTLNLAGGLHLNGVVDVNGAHPEGWSDPSQHGRAAKRDLSSCTACHGADYGGGT SGVSCNACHGGTAWQSNCTFCHGTKVAAYAAADLPKAAPPLGTQGETAVTDRAVGAHQKHLLATLSSPLACAECHAVPAD LGHLDGAAQVTFGVAARRNGAAPAWNGTTCASTYCHGSTAGAAAPAPAWTSTAGTTCASCHLPQSGSGTSAYSGRHYLHV SSRGISCATCHGSGYTASAVVPATHVDGTRQLQPIVGWNAASRSCAPGCHGGETW
Sequences:
>Translated_455_residues MASTHRAALAALALLTATAACDQARPTLGEADAGAEGDCTSCHGDATRTEASALLQAAPPRDAHGSASGPAVGAHQAHLH ATAVSGPIACAECHAVPTQRLHSNGQVDLAFGALARAGGASPAFAGGTCSGVYCHGATLSGGSLTAPVWGSAGPLDCASC HGAPPPSHAAGATACATCHPGTVDADGTLNLAGGLHLNGVVDVNGAHPEGWSDPSQHGRAAKRDLSSCTACHGADYGGGT SGVSCNACHGGTAWQSNCTFCHGTKVAAYAAADLPKAAPPLGTQGETAVTDRAVGAHQKHLLATLSSPLACAECHAVPAD LGHLDGAAQVTFGVAARRNGAAPAWNGTTCASTYCHGSTAGAAAPAPAWTSTAGTTCASCHLPQSGSGTSAYSGRHYLHV SSRGISCATCHGSGYTASAVVPATHVDGTRQLQPIVGWNAASRSCAPGCHGGETW >Mature_454_residues ASTHRAALAALALLTATAACDQARPTLGEADAGAEGDCTSCHGDATRTEASALLQAAPPRDAHGSASGPAVGAHQAHLHA TAVSGPIACAECHAVPTQRLHSNGQVDLAFGALARAGGASPAFAGGTCSGVYCHGATLSGGSLTAPVWGSAGPLDCASCH GAPPPSHAAGATACATCHPGTVDADGTLNLAGGLHLNGVVDVNGAHPEGWSDPSQHGRAAKRDLSSCTACHGADYGGGTS GVSCNACHGGTAWQSNCTFCHGTKVAAYAAADLPKAAPPLGTQGETAVTDRAVGAHQKHLLATLSSPLACAECHAVPADL GHLDGAAQVTFGVAARRNGAAPAWNGTTCASTYCHGSTAGAAAPAPAWTSTAGTTCASCHLPQSGSGTSAYSGRHYLHVS SRGISCATCHGSGYTASAVVPATHVDGTRQLQPIVGWNAASRSCAPGCHGGETW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44522; Mature: 44391
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTHRAALAALALLTATAACDQARPTLGEADAGAEGDCTSCHGDATRTEASALLQAAPP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC RDAHGSASGPAVGAHQAHLHATAVSGPIACAECHAVPTQRLHSNGQVDLAFGALARAGGA CCCCCCCCCCCCCCCHHEEEEEECCCCCEEHHHCCCCHHHHHCCCCEEEEHHHHHHCCCC SPAFAGGTCSGVYCHGATLSGGSLTAPVWGSAGPLDCASCHGAPPPSHAAGATACATCHP CCCCCCCCCCCEEEECCEECCCCEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECCCC GTVDADGTLNLAGGLHLNGVVDVNGAHPEGWSDPSQHGRAAKRDLSSCTACHGADYGGGT CCCCCCCEEEECCCEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC SGVSCNACHGGTAWQSNCTFCHGTKVAAYAAADLPKAAPPLGTQGETAVTDRAVGAHQKH CCCEEECCCCCCCCCCCCCEECCCCEEEEEHHCCCCCCCCCCCCCCCHHHHHHHCHHHHH LLATLSSPLACAECHAVPADLGHLDGAAQVTFGVAARRNGAAPAWNGTTCASTYCHGSTA HHHHHCCCCHHHHHHCCCCHHHCCCCCCEEEEEEHCCCCCCCCCCCCCCHHHHCCCCCCC GAAAPAPAWTSTAGTTCASCHLPQSGSGTSAYSGRHYLHVSSRGISCATCHGSGYTASAV CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEE VPATHVDGTRQLQPIVGWNAASRSCAPGCHGGETW ECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASTHRAALAALALLTATAACDQARPTLGEADAGAEGDCTSCHGDATRTEASALLQAAPP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC RDAHGSASGPAVGAHQAHLHATAVSGPIACAECHAVPTQRLHSNGQVDLAFGALARAGGA CCCCCCCCCCCCCCCHHEEEEEECCCCCEEHHHCCCCHHHHHCCCCEEEEHHHHHHCCCC SPAFAGGTCSGVYCHGATLSGGSLTAPVWGSAGPLDCASCHGAPPPSHAAGATACATCHP CCCCCCCCCCCEEEECCEECCCCEECCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECCCC GTVDADGTLNLAGGLHLNGVVDVNGAHPEGWSDPSQHGRAAKRDLSSCTACHGADYGGGT CCCCCCCEEEECCCEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC SGVSCNACHGGTAWQSNCTFCHGTKVAAYAAADLPKAAPPLGTQGETAVTDRAVGAHQKH CCCEEECCCCCCCCCCCCCEECCCCEEEEEHHCCCCCCCCCCCCCCCHHHHHHHCHHHHH LLATLSSPLACAECHAVPADLGHLDGAAQVTFGVAARRNGAAPAWNGTTCASTYCHGSTA HHHHHCCCCHHHHHHCCCCHHHCCCCCCEEEEEEHCCCCCCCCCCCCCCHHHHCCCCCCC GAAAPAPAWTSTAGTTCASCHLPQSGSGTSAYSGRHYLHVSSRGISCATCHGSGYTASAV CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEE VPATHVDGTRQLQPIVGWNAASRSCAPGCHGGETW ECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA