Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220918092
Identifier: 220918092
GI number: 220918092
Start: 3318538
End: 3319752
Strand: Reverse
Name: 220918092
Synonym: A2cp1_2995
Alternate gene names: NA
Gene position: 3319752-3318538 (Counterclockwise)
Preceding gene: 220918093
Following gene: 220918087
Centisome position: 66.01
GC content: 72.76
Gene sequence:
>1215_bases ATGGCCACGCTCCGCCCGTTCCGCGCCCTGCGCCCGCCCGCCGCCCTCGCCGCCCAGGTCGCCTCGCCGCCGTACGACGT CGTCTCCACGAAGGAGGCGCGCGCGCTCGCCGCCGGGAACGCCGACAGCTTCCTGCGCGTGTCGCGGCCGGAGATCGACC TGCCGGAGGGCGTGGACGAGCACTCCGACCCGGTCTACGCGAAGGGGCGCGAGAACCTCGACGAGCTGGTGCGCCGCGGC GTGCTGCGCGCCGACTCGGAGCCGCGCTTCTACGTGTACGCGCAGCGGATGGGCGAGCACCGGCAGACCGGCCTGGTGGC GTGCGCGTCGGTGGACGAGTACGACCGCGACGTCATCAAGAAGCACGAGAAGACGCGCGCCGACAAGGAGGACGACCGCG TCCGCCACATCGACACGCTGTCGGCGCACGACGAGCCGGTGTTCCTCACCTACCGCGCGGTGCCGGACATCGACGCGGCG ATCGAGGAGGTGAAGCGCGCCGCGCCCGAGTACGACCTCGTCACGCCGGACGGCGTCGCCCACCAGCTCTGGGTGGTCCC CCCGGCGCTCGGCGCCCGCATCGAGCAGCTCTTCGGCGGCGTGCCCGCGCTCTACGTGGCCGACGGCCACCACCGGTCCG CCGCCGCCTCGCGCGTCCACGCGGCGCGCCGCGGCCAGCCCGGCGAGCACGACGGGTTCCTCGCGGTGGTGTTCCCGCAC GACCAGATGCAGATCCTCGCCTACAACCGCCTGGTGCGCGACCCGCAGCGGCGCTCGCCCGACGCGCTGCTCGAGGCGCT GCGCCAGGTGCTCGACCTCGAGCCCGCGAAGGACCCGCGCCCCGATCACCCGCTCGCGTTCGGCGTGTACCTGGGCGGCC GCTGGTGGCACGCCCACGTCCGCAAGGGCAGCTTCGATGCCGCCGATCCGGTGAAGGCGCTCGACTGCTCCATCGCGCAG GACCAGCTGCTCGAGCCGCTGTTCGGCATCCGCGATCCGCGCACCTCGAAGGACGTCGACTTCGTCGGCGGCATCCGAGG TCACCAGGAGCTGGAGCGCCGGGTGAACGAGGAGGGCTGGTCGCTCGCGCTGCACCTGTTCCCCACGCGCATCGAGCAGC TCATCGCGGTGTCCGACGCGGGCAAGCTCATGCCGCCGAAGAGCACCTGGTTCGAGCCGAAGCTGCGCTCGGGGCTGTTC GTCCATTCTTTCTAA
Upstream 100 bases:
>100_bases CTGAGCGGGCGACCCTGTTAAGACGAGTGGCCCCCCGGCGCCCCCCGCGCGCCGGACCCCCTTCCACTCGCCAGCGGCCG CCGCGCCGCCCGGAGGTCCG
Downstream 100 bases:
>100_bases GGACTTACGGGCTTCGGCCTCCGAACCCGCAGCGCTGCGGCAGCACGAAGACCACCCGCAAGCGGAGCCGCGGGCGCCGG CACGGGCCACCCGCGGCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MATLRPFRALRPPAALAAQVASPPYDVVSTKEARALAAGNADSFLRVSRPEIDLPEGVDEHSDPVYAKGRENLDELVRRG VLRADSEPRFYVYAQRMGEHRQTGLVACASVDEYDRDVIKKHEKTRADKEDDRVRHIDTLSAHDEPVFLTYRAVPDIDAA IEEVKRAAPEYDLVTPDGVAHQLWVVPPALGARIEQLFGGVPALYVADGHHRSAAASRVHAARRGQPGEHDGFLAVVFPH DQMQILAYNRLVRDPQRRSPDALLEALRQVLDLEPAKDPRPDHPLAFGVYLGGRWWHAHVRKGSFDAADPVKALDCSIAQ DQLLEPLFGIRDPRTSKDVDFVGGIRGHQELERRVNEEGWSLALHLFPTRIEQLIAVSDAGKLMPPKSTWFEPKLRSGLF VHSF
Sequences:
>Translated_404_residues MATLRPFRALRPPAALAAQVASPPYDVVSTKEARALAAGNADSFLRVSRPEIDLPEGVDEHSDPVYAKGRENLDELVRRG VLRADSEPRFYVYAQRMGEHRQTGLVACASVDEYDRDVIKKHEKTRADKEDDRVRHIDTLSAHDEPVFLTYRAVPDIDAA IEEVKRAAPEYDLVTPDGVAHQLWVVPPALGARIEQLFGGVPALYVADGHHRSAAASRVHAARRGQPGEHDGFLAVVFPH DQMQILAYNRLVRDPQRRSPDALLEALRQVLDLEPAKDPRPDHPLAFGVYLGGRWWHAHVRKGSFDAADPVKALDCSIAQ DQLLEPLFGIRDPRTSKDVDFVGGIRGHQELERRVNEEGWSLALHLFPTRIEQLIAVSDAGKLMPPKSTWFEPKLRSGLF VHSF >Mature_403_residues ATLRPFRALRPPAALAAQVASPPYDVVSTKEARALAAGNADSFLRVSRPEIDLPEGVDEHSDPVYAKGRENLDELVRRGV LRADSEPRFYVYAQRMGEHRQTGLVACASVDEYDRDVIKKHEKTRADKEDDRVRHIDTLSAHDEPVFLTYRAVPDIDAAI EEVKRAAPEYDLVTPDGVAHQLWVVPPALGARIEQLFGGVPALYVADGHHRSAAASRVHAARRGQPGEHDGFLAVVFPHD QMQILAYNRLVRDPQRRSPDALLEALRQVLDLEPAKDPRPDHPLAFGVYLGGRWWHAHVRKGSFDAADPVKALDCSIAQD QLLEPLFGIRDPRTSKDVDFVGGIRGHQELERRVNEEGWSLALHLFPTRIEQLIAVSDAGKLMPPKSTWFEPKLRSGLFV HSF
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45127; Mature: 44996
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLRPFRALRPPAALAAQVASPPYDVVSTKEARALAAGNADSFLRVSRPEIDLPEGVDE CCCCCCHHHHCCHHHHHHHHCCCCHHHHCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCC HSDPVYAKGRENLDELVRRGVLRADSEPRFYVYAQRMGEHRQTGLVACASVDEYDRDVIK CCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHCCHHHCCEEEEECCCHHHHHHHH KHEKTRADKEDDRVRHIDTLSAHDEPVFLTYRAVPDIDAAIEEVKRAAPEYDLVTPDGVA HHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCC HQLWVVPPALGARIEQLFGGVPALYVADGHHRSAAASRVHAARRGQPGEHDGFLAVVFPH CEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECC DQMQILAYNRLVRDPQRRSPDALLEALRQVLDLEPAKDPRPDHPLAFGVYLGGRWWHAHV CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEEE RKGSFDAADPVKALDCSIAQDQLLEPLFGIRDPRTSKDVDFVGGIRGHQELERRVNEEGW CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCC SLALHLFPTRIEQLIAVSDAGKLMPPKSTWFEPKLRSGLFVHSF EEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEECC >Mature Secondary Structure ATLRPFRALRPPAALAAQVASPPYDVVSTKEARALAAGNADSFLRVSRPEIDLPEGVDE CCCCCHHHHCCHHHHHHHHCCCCHHHHCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCC HSDPVYAKGRENLDELVRRGVLRADSEPRFYVYAQRMGEHRQTGLVACASVDEYDRDVIK CCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHCCHHHCCEEEEECCCHHHHHHHH KHEKTRADKEDDRVRHIDTLSAHDEPVFLTYRAVPDIDAAIEEVKRAAPEYDLVTPDGVA HHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCC HQLWVVPPALGARIEQLFGGVPALYVADGHHRSAAASRVHAARRGQPGEHDGFLAVVFPH CEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECC DQMQILAYNRLVRDPQRRSPDALLEALRQVLDLEPAKDPRPDHPLAFGVYLGGRWWHAHV CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEEE RKGSFDAADPVKALDCSIAQDQLLEPLFGIRDPRTSKDVDFVGGIRGHQELERRVNEEGW CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCC SLALHLFPTRIEQLIAVSDAGKLMPPKSTWFEPKLRSGLFVHSF EEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA