Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917972
Identifier: 220917972
GI number: 220917972
Start: 3173305
End: 3173793
Strand: Direct
Name: 220917972
Synonym: A2cp1_2873
Alternate gene names: NA
Gene position: 3173305-3173793 (Clockwise)
Preceding gene: 220917971
Following gene: 220917983
Centisome position: 63.1
GC content: 75.26
Gene sequence:
>489_bases ATGGGTGACCGCGTGCCGATCGACCGCAAGCACCTCGGCCGGCGCTACGGCCCGTACCGCTTCACGGTGGGTCTCGAGCA GATCCGCGACTTCGCCGCGGCGACCGGCGGCGGCGTGCCCGGCCGGGTCTTCGCGGTGCCGCCGGAGCGCGCCCACCCGT GGACCTGGGACGAGGCCGCGGCCGCCGCCTCGCCGCACGGCGGGCTGGTGGCGCCGCCCACCTTCGCGGCCGCGTTCGCC ATCCAGCCGTTCGCGAACGCCTGCGCCGACCCGGCGCTGGGCGTGAACGTGCTCCGCCTCGTCCACGCGGAGCAGTCGTT CGAGCTGGAGGCGCCGGTGCGCCCCGGGGACGTGCTCGAGACCGAGGGCGAGATCACCCGGATCCAGGACCGGGGCAGCC TCGACTTCCTCGAGGTCACCACCGAGACCCGCAACCAGCGCGGCGAGCGCGTGGTGCGCGGGGTCTGGACCGCGATCATC CGGAACTGA
Upstream 100 bases:
>100_bases GTCGCGCTCGAGGGCCCGCGGATCGCGCTCGAGCTGGAGGCGACGAACCAGCGCGGCGAGGAGGTCCTGAAGGGCGCGGT GGCCGAGGGCCACCTCGGGG
Downstream 100 bases:
>100_bases GGCCCGCTCGTGGTGGGCCGGTCGAGCCGCGGGCGGGGCGCGCGAAGGACCGTCAGGTCGTGATGACCCCGTCCGCGATC AGGTTCGCCAGGATGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGDRVPIDRKHLGRRYGPYRFTVGLEQIRDFAAATGGGVPGRVFAVPPERAHPWTWDEAAAAASPHGGLVAPPTFAAAFA IQPFANACADPALGVNVLRLVHAEQSFELEAPVRPGDVLETEGEITRIQDRGSLDFLEVTTETRNQRGERVVRGVWTAII RN
Sequences:
>Translated_162_residues MGDRVPIDRKHLGRRYGPYRFTVGLEQIRDFAAATGGGVPGRVFAVPPERAHPWTWDEAAAAASPHGGLVAPPTFAAAFA IQPFANACADPALGVNVLRLVHAEQSFELEAPVRPGDVLETEGEITRIQDRGSLDFLEVTTETRNQRGERVVRGVWTAII RN >Mature_161_residues GDRVPIDRKHLGRRYGPYRFTVGLEQIRDFAAATGGGVPGRVFAVPPERAHPWTWDEAAAAASPHGGLVAPPTFAAAFAI QPFANACADPALGVNVLRLVHAEQSFELEAPVRPGDVLETEGEITRIQDRGSLDFLEVTTETRNQRGERVVRGVWTAIIR N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0336 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002539 - InterPro: IPR016709 [H]
Pfam domain/function: PF01575 MaoC_dehydratas [H]
EC number: NA
Molecular weight: Translated: 17636; Mature: 17505
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDRVPIDRKHLGRRYGPYRFTVGLEQIRDFAAATGGGVPGRVFAVPPERAHPWTWDEAA CCCCCCCCHHHHCCCCCCEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHH AAASPHGGLVAPPTFAAAFAIQPFANACADPALGVNVLRLVHAEQSFELEAPVRPGDVLE HCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCC TEGEITRIQDRGSLDFLEVTTETRNQRGERVVRGVWTAIIRN CCCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GDRVPIDRKHLGRRYGPYRFTVGLEQIRDFAAATGGGVPGRVFAVPPERAHPWTWDEAA CCCCCCCHHHHCCCCCCEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHH AAASPHGGLVAPPTFAAAFAIQPFANACADPALGVNVLRLVHAEQSFELEAPVRPGDVLE HCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCC TEGEITRIQDRGSLDFLEVTTETRNQRGERVVRGVWTAIIRN CCCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]