Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is hetM [H]
Identifier: 220917970
GI number: 220917970
Start: 3171662
End: 3172807
Strand: Direct
Name: hetM [H]
Synonym: A2cp1_2871
Alternate gene names: 220917970
Gene position: 3171662-3172807 (Clockwise)
Preceding gene: 220917969
Following gene: 220917971
Centisome position: 63.06
GC content: 75.04
Gene sequence:
>1146_bases ATGGGCGCGCGCGTCCACTTCGTCACGGGGTACCCGGGCTTCATCGGGAAGCGGCTGGTGCGCCGCCTCCTCGAGGACGC GCTGCGGGCCGACGACCGCGTGGTGCTGCTGGTCCAGCCGCGCAACGCCGCCGCCGCGCGGGCCGACCTGGGCGCGCTCG GCGCGGAGCGGGCCGAGGTCCTGGAGGGCGACGTCGAGCAGATGCACCTCGGCCTCTCCGGCGCCGAGTGGAAGGCGCTC GCCCGCGAGGTGACCGACGTCTGGCACCTGGCGGCGCGCACCTGGCTGGGCGCCTCGCGCCCGGAGTTCCGCCGGGTCAA CCTCGAGGGCACGCGCAACGTGCTGGAGCTGGGCCGCGCGGCCCGCCGGCTGCGCCGCCTCAACCACTTCTCCACCGCGT TCGTCTCCGGCGACCGGGTGGGCGTCATCCTCGAGGACGAGCTGGCCATGGGCCAGCGCTTCCACAACGCGTACGAGGAG ACGAAGTACCAGGGCGAGCTGCTGGTCCGCGCGGCGCAGTCGGAGCTGCCCGCGACCATCTACCGCCCGAGCATCGTGGT GGGCGACTCCCGCACCGGCGAGATCGACCGGTTCGAGGGGCCCTACGCGCTCGCGATCCTGCTGGTGGCGTCGCCGCTGG CGGTCCCGCTGCCGCTCCCGGGCGACGCGGTGGCGCCGCTCAACGTGGTCCCGGTGGACTTCGTGGTGAACGCGGCGGTG GCCATCGGCGAGGCGCCCGCCGCGGCCGGGCGCACGGTGCACCTGGTGGACCCGGCGCCGCTCTCGGCGCGGCGCGTGTA CGAGCTCATCGCCGCGCACGCGGGCAAGCGCCTGCCCTCGGTGTCGGTGCCGGCGCGCGTGCTCCAGGCGCTGCTGCAGC TCCCGCTGCTGGAGCGGCTCTCGCGCGTGCACCGGCCCGCCATCGAGTACGTGAACCACCTCGCGATCTACAACTGCCGC AACCTGCTCGAGCTGCTCGACGGCACCGGCGTCCGCTGCCCGCCCATCTCCAGCTACCTCGACCGGCTCATCGAGTTCGT GCAGGGGACGTTCGAGAAGCGGCGCGAGGCCGAGCTGGCGCAGCTCGCGGGCGAGCCCGACGATCCGCTCGACCCGCCTG CCCCGCCCGCGACCGGCGCCGCCTGA
Upstream 100 bases:
>100_bases GAGGCGCTGGCCGGCAAGGCCGACCGCCTGCTCGCGGACCTCCGCGCGGGCCGGGGGCGCAGGCTTCCCAACGCGCCCCC CGTGCGCTATTGACCGCGGC
Downstream 100 bases:
>100_bases GCTCGCCCCGGGGCGCCGGCGCGGTGACGCCGCGCGTCGTGATTCCGAGGGGGTGCGCGGGCTTGTGCTCCGCCCGGACC TCCCTTACACGGGAGGGATG
Product: Male sterility domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MGARVHFVTGYPGFIGKRLVRRLLEDALRADDRVVLLVQPRNAAAARADLGALGAERAEVLEGDVEQMHLGLSGAEWKAL AREVTDVWHLAARTWLGASRPEFRRVNLEGTRNVLELGRAARRLRRLNHFSTAFVSGDRVGVILEDELAMGQRFHNAYEE TKYQGELLVRAAQSELPATIYRPSIVVGDSRTGEIDRFEGPYALAILLVASPLAVPLPLPGDAVAPLNVVPVDFVVNAAV AIGEAPAAAGRTVHLVDPAPLSARRVYELIAAHAGKRLPSVSVPARVLQALLQLPLLERLSRVHRPAIEYVNHLAIYNCR NLLELLDGTGVRCPPISSYLDRLIEFVQGTFEKRREAELAQLAGEPDDPLDPPAPPATGAA
Sequences:
>Translated_381_residues MGARVHFVTGYPGFIGKRLVRRLLEDALRADDRVVLLVQPRNAAAARADLGALGAERAEVLEGDVEQMHLGLSGAEWKAL AREVTDVWHLAARTWLGASRPEFRRVNLEGTRNVLELGRAARRLRRLNHFSTAFVSGDRVGVILEDELAMGQRFHNAYEE TKYQGELLVRAAQSELPATIYRPSIVVGDSRTGEIDRFEGPYALAILLVASPLAVPLPLPGDAVAPLNVVPVDFVVNAAV AIGEAPAAAGRTVHLVDPAPLSARRVYELIAAHAGKRLPSVSVPARVLQALLQLPLLERLSRVHRPAIEYVNHLAIYNCR NLLELLDGTGVRCPPISSYLDRLIEFVQGTFEKRREAELAQLAGEPDDPLDPPAPPATGAA >Mature_380_residues GARVHFVTGYPGFIGKRLVRRLLEDALRADDRVVLLVQPRNAAAARADLGALGAERAEVLEGDVEQMHLGLSGAEWKALA REVTDVWHLAARTWLGASRPEFRRVNLEGTRNVLELGRAARRLRRLNHFSTAFVSGDRVGVILEDELAMGQRFHNAYEET KYQGELLVRAAQSELPATIYRPSIVVGDSRTGEIDRFEGPYALAILLVASPLAVPLPLPGDAVAPLNVVPVDFVVNAAVA IGEAPAAAGRTVHLVDPAPLSARRVYELIAAHAGKRLPSVSVPARVLQALLQLPLLERLSRVHRPAIEYVNHLAIYNCRN LLELLDGTGVRCPPISSYLDRLIEFVQGTFEKRREAELAQLAGEPDDPLDPPAPPATGAA
Specific function: Unknown
COG id: COG3320
COG function: function code Q; Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Drosophila melanogaster, GI28572029, Length=278, Percent_Identity=26.6187050359712, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI281363511, Length=284, Percent_Identity=28.169014084507, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI281363509, Length=284, Percent_Identity=28.169014084507, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI24654209, Length=284, Percent_Identity=28.169014084507, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI281361942, Length=283, Percent_Identity=26.8551236749117, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009081 - InterPro: IPR013120 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR010080 [H]
Pfam domain/function: PF07993 NAD_binding_4; PF00550 PP-binding [H]
EC number: NA
Molecular weight: Translated: 41465; Mature: 41334
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGARVHFVTGYPGFIGKRLVRRLLEDALRADDRVVLLVQPRNAAAARADLGALGAERAEV CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHH LEGDVEQMHLGLSGAEWKALAREVTDVWHLAARTWLGASRPEFRRVNLEGTRNVLELGRA HHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHH ARRLRRLNHFSTAFVSGDRVGVILEDELAMGQRFHNAYEETKYQGELLVRAAQSELPATI HHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE YRPSIVVGDSRTGEIDRFEGPYALAILLVASPLAVPLPLPGDAVAPLNVVPVDFVVNAAV ECCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHH AIGEAPAAAGRTVHLVDPAPLSARRVYELIAAHAGKRLPSVSVPARVLQALLQLPLLERL HHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH SRVHRPAIEYVNHLAIYNCRNLLELLDGTGVRCPPISSYLDRLIEFVQGTFEKRREAELA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QLAGEPDDPLDPPAPPATGAA HHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GARVHFVTGYPGFIGKRLVRRLLEDALRADDRVVLLVQPRNAAAARADLGALGAERAEV CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHH LEGDVEQMHLGLSGAEWKALAREVTDVWHLAARTWLGASRPEFRRVNLEGTRNVLELGRA HHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHH ARRLRRLNHFSTAFVSGDRVGVILEDELAMGQRFHNAYEETKYQGELLVRAAQSELPATI HHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE YRPSIVVGDSRTGEIDRFEGPYALAILLVASPLAVPLPLPGDAVAPLNVVPVDFVVNAAV ECCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHH AIGEAPAAAGRTVHLVDPAPLSARRVYELIAAHAGKRLPSVSVPARVLQALLQLPLLERL HHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH SRVHRPAIEYVNHLAIYNCRNLLELLDGTGVRCPPISSYLDRLIEFVQGTFEKRREAELA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QLAGEPDDPLDPPAPPATGAA HHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8157596; 11759840 [H]