Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917959
Identifier: 220917959
GI number: 220917959
Start: 3164648
End: 3165295
Strand: Reverse
Name: 220917959
Synonym: A2cp1_2860
Alternate gene names: NA
Gene position: 3165295-3164648 (Counterclockwise)
Preceding gene: 220917961
Following gene: 220917958
Centisome position: 62.94
GC content: 75.0
Gene sequence:
>648_bases ATGCACGCCCGCCCGCTCGTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTCGCGCTGCTCGCGCCCGCCGCCCGCGCGGG CGAGTCGTCGCTCCGGTGCGACGGCGGCACGGTGGAGCTCGGTGCCTCGAGGCTCGACCTGCTCGCCCGGTGCGGCGAGC CGGCGCTGCGCGAGGCGCGCGAGATCCAGCGCAGCGTGCTCGTGATCGCCGGCCGGGCGTCCCAGGAATCGATCGCGGTC GTCGAGCAATGGATCTACAACCACGGCCCGCAGCGCTTCATCGACCTCGTCACCGTCGAGGGAGGCAAGGTGACGGCGAT CGAGCGCGGCGGGTACGGGTATGCGCCGGAGCGCGTGGCCGCGGTGCGGCCCCCCGGGCGGGCGAGCTGCGATCCGTCTG CGGTGAGGGCCGGCGAGAGCAAGCTCGATCTCCTCGTCCGGTGCGGGGAGCCGCTCGCGAAGGACGTGGTCGTCGAGCCG CGCGCGCTGCCCGCGGGTGGGCAGGGCGACGCGGCGGGCGAGGTGCGGGTGCCGGTGGATCTGTGGACCTTCGACTTCGG GCCGCAGCGCTTCACGCTCGTCGCCCGGCTGGAGGGCGGGAGGGTGATCGCCGTGGAGCGCGGCGGCTACGGGACGACCG TGCCCTAG
Upstream 100 bases:
>100_bases CCGCGCGCAGCGGGGCGGCGGCGGGGCGCGCGCACGCCCGCCGCGCCCCCGGGCGTTCACCGAACGTGGTACGCTGTGCT CCCGCTCCCGGAGGCCCCCC
Downstream 100 bases:
>100_bases GGCGGCGGGTGGCCGCGCGGGCGCCCGCAGCGCAGCGCCTCGCGCCGCTCGGCCCGTCCGGTGCTCACCTTTACCGGGTG AAGGACGCGTTCCATCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MHARPLVLLLLLLLLLLALLAPAARAGESSLRCDGGTVELGASRLDLLARCGEPALREAREIQRSVLVIAGRASQESIAV VEQWIYNHGPQRFIDLVTVEGGKVTAIERGGYGYAPERVAAVRPPGRASCDPSAVRAGESKLDLLVRCGEPLAKDVVVEP RALPAGGQGDAAGEVRVPVDLWTFDFGPQRFTLVARLEGGRVIAVERGGYGTTVP
Sequences:
>Translated_215_residues MHARPLVLLLLLLLLLLALLAPAARAGESSLRCDGGTVELGASRLDLLARCGEPALREAREIQRSVLVIAGRASQESIAV VEQWIYNHGPQRFIDLVTVEGGKVTAIERGGYGYAPERVAAVRPPGRASCDPSAVRAGESKLDLLVRCGEPLAKDVVVEP RALPAGGQGDAAGEVRVPVDLWTFDFGPQRFTLVARLEGGRVIAVERGGYGTTVP >Mature_215_residues MHARPLVLLLLLLLLLLALLAPAARAGESSLRCDGGTVELGASRLDLLARCGEPALREAREIQRSVLVIAGRASQESIAV VEQWIYNHGPQRFIDLVTVEGGKVTAIERGGYGYAPERVAAVRPPGRASCDPSAVRAGESKLDLLVRCGEPLAKDVVVEP RALPAGGQGDAAGEVRVPVDLWTFDFGPQRFTLVARLEGGRVIAVERGGYGTTVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22806; Mature: 22806
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHARPLVLLLLLLLLLLALLAPAARAGESSLRCDGGTVELGASRLDLLARCGEPALREAR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEECHHHHHHHHHCCCHHHHHHH EIQRSVLVIAGRASQESIAVVEQWIYNHGPQRFIDLVTVEGGKVTAIERGGYGYAPERVA HHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCEE AVRPPGRASCDPSAVRAGESKLDLLVRCGEPLAKDVVVEPRALPAGGQGDAAGEVRVPVD EECCCCCCCCCHHHHHCCCHHHHHHEECCCCHHHHEEECCCCCCCCCCCCCCCEEEEEEE LWTFDFGPQRFTLVARLEGGRVIAVERGGYGTTVP EEEECCCCCEEEEEEEECCCEEEEEECCCCCCCCC >Mature Secondary Structure MHARPLVLLLLLLLLLLALLAPAARAGESSLRCDGGTVELGASRLDLLARCGEPALREAR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEECHHHHHHHHHCCCHHHHHHH EIQRSVLVIAGRASQESIAVVEQWIYNHGPQRFIDLVTVEGGKVTAIERGGYGYAPERVA HHHHHEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCEE AVRPPGRASCDPSAVRAGESKLDLLVRCGEPLAKDVVVEPRALPAGGQGDAAGEVRVPVD EECCCCCCCCCHHHHHCCCHHHHHHEECCCCHHHHEEECCCCCCCCCCCCCCCEEEEEEE LWTFDFGPQRFTLVARLEGGRVIAVERGGYGTTVP EEEECCCCCEEEEEEEECCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA