Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220917946
Identifier: 220917946
GI number: 220917946
Start: 3146079
End: 3146969
Strand: Reverse
Name: 220917946
Synonym: A2cp1_2847
Alternate gene names: NA
Gene position: 3146969-3146079 (Counterclockwise)
Preceding gene: 220917947
Following gene: 220917945
Centisome position: 62.57
GC content: 78.79
Gene sequence:
>891_bases ATGCGCCGATCCGCCCGCACGCGTCCCGCCGCCGTCCTCGCCGCGCTCGCCCTCGCGCCGGGCTGCGCGCCGCCCCCGCT CGACGCTGCGCCGCCGGGGACGGCGGGCGAGCGGGTCCGGATCGTCAGCTGGAACGTCCACGACCTGTTCGACGATGTCG ATCGGCTCGAGCCGCCCGGCGCGCTCGACACCGTCGCGACCGCGGACGAGGTCGAGGCGAAGCTGGCGCGGGTCACGGCG GTGCTGGCGCGGCTGGACGCCGACCTGGTGCTGCTCCAGGAGGTCGAGACCGCCGCGCTGGCCGGGGCGCTGGCGGCGCG GGCGGGGTACGCGGAGGCGCGGCTGGTGGAGGGGAACGATCCGCGCGGCATCGACGTCGCGGTCCTCTCGCGGCTGCCGC TGCGCGCCTACGTCAGCCACCGGGACGAGCGGGACGCCTCGGGCCGGCCGCTGTTCCCGCGCGACTGCGTGGAGGCGCAC GCGGCGCTCCCGGACGGCGGGACGCTGGCGCTGGTGGGCAGCCACCTCAGCTCGGCGCTCTCCGACGACGGGACGCGCCG CGCGGAGCAGGCGGCCCGCCTGCGCGAGGTCGCGGACGGGCTGCTCCGCGCCGGCGCGCGGGTGGTCGCGGGCGGCGACC TGAACGACGAGGCCGGGTCGACCGCGCTCGCCCCGCTGCTCGGCGACGGCGGCTGGATCGATCCGGCCGCGGCGTTGCCG CCGGAGGCGCGGTGGACCTGGTCCGGCGGAGCGGCCCGCGCCGCGCTCGATCACCTGGCCATCCCGCGGGCGGACGCAGG CTCGGTGGTACAGGCGGCGATCGCGGGAGGGCCGGACGTGCAGGCGGCCTCGGATCACCGGCCGGTGGTGCTGGACCTGT GGCTGCAGTAG
Upstream 100 bases:
>100_bases AGGGCGGGAGCATGCCCTACGGGATGACGGGGTTCGCGACGATCTTCGCCGCGTACTGACCGCCGGCGCGCGCGGCGCCG GCCTTGCAGCGCGCCGTGGC
Downstream 100 bases:
>100_bases GGCCGGGAGACGCAGGGGTTCCACCGTGTCGCCTGGGTCCAGACATTTCGGCGGGGGGTGGCGCATGGCCAGCGATCGGC GTCCGGACGATCCGAGGGTT
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MRRSARTRPAAVLAALALAPGCAPPPLDAAPPGTAGERVRIVSWNVHDLFDDVDRLEPPGALDTVATADEVEAKLARVTA VLARLDADLVLLQEVETAALAGALAARAGYAEARLVEGNDPRGIDVAVLSRLPLRAYVSHRDERDASGRPLFPRDCVEAH AALPDGGTLALVGSHLSSALSDDGTRRAEQAARLREVADGLLRAGARVVAGGDLNDEAGSTALAPLLGDGGWIDPAAALP PEARWTWSGGAARAALDHLAIPRADAGSVVQAAIAGGPDVQAASDHRPVVLDLWLQ
Sequences:
>Translated_296_residues MRRSARTRPAAVLAALALAPGCAPPPLDAAPPGTAGERVRIVSWNVHDLFDDVDRLEPPGALDTVATADEVEAKLARVTA VLARLDADLVLLQEVETAALAGALAARAGYAEARLVEGNDPRGIDVAVLSRLPLRAYVSHRDERDASGRPLFPRDCVEAH AALPDGGTLALVGSHLSSALSDDGTRRAEQAARLREVADGLLRAGARVVAGGDLNDEAGSTALAPLLGDGGWIDPAAALP PEARWTWSGGAARAALDHLAIPRADAGSVVQAAIAGGPDVQAASDHRPVVLDLWLQ >Mature_296_residues MRRSARTRPAAVLAALALAPGCAPPPLDAAPPGTAGERVRIVSWNVHDLFDDVDRLEPPGALDTVATADEVEAKLARVTA VLARLDADLVLLQEVETAALAGALAARAGYAEARLVEGNDPRGIDVAVLSRLPLRAYVSHRDERDASGRPLFPRDCVEAH AALPDGGTLALVGSHLSSALSDDGTRRAEQAARLREVADGLLRAGARVVAGGDLNDEAGSTALAPLLGDGGWIDPAAALP PEARWTWSGGAARAALDHLAIPRADAGSVVQAAIAGGPDVQAASDHRPVVLDLWLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30547; Mature: 30547
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSARTRPAAVLAALALAPGCAPPPLDAAPPGTAGERVRIVSWNVHDLFDDVDRLEPPG CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCC ALDTVATADEVEAKLARVTAVLARLDADLVLLQEVETAALAGALAARAGYAEARLVEGND CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC PRGIDVAVLSRLPLRAYVSHRDERDASGRPLFPRDCVEAHAALPDGGTLALVGSHLSSAL CCCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHH SDDGTRRAEQAARLREVADGLLRAGARVVAGGDLNDEAGSTALAPLLGDGGWIDPAAALP CCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEHHHHCCCCCCCCCCCCC PEARWTWSGGAARAALDHLAIPRADAGSVVQAAIAGGPDVQAASDHRPVVLDLWLQ CCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MRRSARTRPAAVLAALALAPGCAPPPLDAAPPGTAGERVRIVSWNVHDLFDDVDRLEPPG CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCC ALDTVATADEVEAKLARVTAVLARLDADLVLLQEVETAALAGALAARAGYAEARLVEGND CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC PRGIDVAVLSRLPLRAYVSHRDERDASGRPLFPRDCVEAHAALPDGGTLALVGSHLSSAL CCCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHH SDDGTRRAEQAARLREVADGLLRAGARVVAGGDLNDEAGSTALAPLLGDGGWIDPAAALP CCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEHHHHCCCCCCCCCCCCC PEARWTWSGGAARAALDHLAIPRADAGSVVQAAIAGGPDVQAASDHRPVVLDLWLQ CCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA