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The map label for this gene is yxnA [H]

Identifier: 220917944

GI number: 220917944

Start: 3144664

End: 3145581

Strand: Reverse

Name: yxnA [H]

Synonym: A2cp1_2845

Alternate gene names: 220917944

Gene position: 3145581-3144664 (Counterclockwise)

Preceding gene: 220917945

Following gene: 220917943

Centisome position: 62.54

GC content: 75.05

Gene sequence:

>918_bases
ATGCGCGTGGCGCTGATCGCGCGCAACGCCGAGGCCCTCGAGAACGCCGCCCGCGAGATCCGCGGCGCGGGCGGCGAGGC
CATCGCCGTGGTGGCCGACGTCTCGGACGCCGGCGCGGTGGACGCGGCCGCGGACGCGGTGGTGCGCGCGTGGGGCGGCA
TCGACGTGTGGGTGAACGACGCGATGGTGAGCGTGTTCGCGCCGGTGATGGAGACGACGGCGGAGGAGTACCGGCGCGTC
ACCGAGGTGACGTACCTCGGCTACGTCCACGGCACGCGGGCGGCGCTCCGCCACATGCTGCCGCGCAACCGGGGGCACGT
CGTCCAGGTCGGGTCCGCCCTCTGCTACCGCTCCATCCCGCTGCAGAGCGCCTACTGCGCCGCGAAGGCAGCGGTCCGCG
GCTTCACCGACGCGCTCCGCTGCGAGCTCGCGCACGATCGCAGCCGCGTGCGGCTCTCGATGGTGCACCTGCCGGCGGTC
AACACGCCGCAGTTCGAGCTGGTCCGGACGCGCTTGCCCGGCCACCCGAAGCCGGTGCCGCCCATCTACCAGCCCGAGGT
GATCGCGCGCGCGGTGCTGGCGGTGGTGCGGCGGCCGCGCCGCGAGCTGTGGGTCACGTGGAGCACGGTGCGTGCGATCC
TCGGTCAGCGGACGATCCCGGGGCTGCTCGATCGCTACCTGGGCCGGATCGGCTACCGCGCGCAGCAGGCCGATCGCCCG
CCCGAGCCGGGGCGGCCGGACGATCTCGATCGGCCGGTGCCGGGAGATCACGGCGCACACGGCGAGTTCTCGGCGGAGGC
CCGGCGCCGCAGCGCATCGCTCTGGCTCACGCTCCACCGCCGAAGCCTGGCCGCGGGGGCGGTGCTCCTGGCCGCGGGGG
CGGTGTGGGCTTCACGAAGCGTGCGTGGGGCCACCTGA

Upstream 100 bases:

>100_bases
CGGCGGTGAGGCGGGACCTGGCGGGGAAGGTCGCGGTGGTGACGGGGGCGTCGGCGGGCGTGGGGCGCGCGCGGTGGCGC
GCGAGCTGGGGCGGGCGCGG

Downstream 100 bases:

>100_bases
AGCGGGGACGCGCCGGCGCTCGGATGGGGCGCTCGTGCGCACCGCGCTGCGAGGTCGTCTCATGGCCGTGGGTCGCCGGG
TCACGCGATACCTGCGCGCC

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MRVALIARNAEALENAAREIRGAGGEAIAVVADVSDAGAVDAAADAVVRAWGGIDVWVNDAMVSVFAPVMETTAEEYRRV
TEVTYLGYVHGTRAALRHMLPRNRGHVVQVGSALCYRSIPLQSAYCAAKAAVRGFTDALRCELAHDRSRVRLSMVHLPAV
NTPQFELVRTRLPGHPKPVPPIYQPEVIARAVLAVVRRPRRELWVTWSTVRAILGQRTIPGLLDRYLGRIGYRAQQADRP
PEPGRPDDLDRPVPGDHGAHGEFSAEARRRSASLWLTLHRRSLAAGAVLLAAGAVWASRSVRGAT

Sequences:

>Translated_305_residues
MRVALIARNAEALENAAREIRGAGGEAIAVVADVSDAGAVDAAADAVVRAWGGIDVWVNDAMVSVFAPVMETTAEEYRRV
TEVTYLGYVHGTRAALRHMLPRNRGHVVQVGSALCYRSIPLQSAYCAAKAAVRGFTDALRCELAHDRSRVRLSMVHLPAV
NTPQFELVRTRLPGHPKPVPPIYQPEVIARAVLAVVRRPRRELWVTWSTVRAILGQRTIPGLLDRYLGRIGYRAQQADRP
PEPGRPDDLDRPVPGDHGAHGEFSAEARRRSASLWLTLHRRSLAAGAVLLAAGAVWASRSVRGAT
>Mature_305_residues
MRVALIARNAEALENAAREIRGAGGEAIAVVADVSDAGAVDAAADAVVRAWGGIDVWVNDAMVSVFAPVMETTAEEYRRV
TEVTYLGYVHGTRAALRHMLPRNRGHVVQVGSALCYRSIPLQSAYCAAKAAVRGFTDALRCELAHDRSRVRLSMVHLPAV
NTPQFELVRTRLPGHPKPVPPIYQPEVIARAVLAVVRRPRRELWVTWSTVRAILGQRTIPGLLDRYLGRIGYRAQQADRP
PEPGRPDDLDRPVPGDHGAHGEFSAEARRRSASLWLTLHRRSLAAGAVLLAAGAVWASRSVRGAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7706318, Length=146, Percent_Identity=37.6712328767123, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI20149619, Length=148, Percent_Identity=36.4864864864865, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI31543615, Length=219, Percent_Identity=27.3972602739726, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI210032110, Length=198, Percent_Identity=28.7878787878788, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI142976729, Length=220, Percent_Identity=26.3636363636364, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI157739938, Length=147, Percent_Identity=29.9319727891156, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI40254992, Length=175, Percent_Identity=28, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1787820, Length=190, Percent_Identity=26.8421052631579, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI87082100, Length=169, Percent_Identity=30.7692307692308, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193203117, Length=202, Percent_Identity=26.2376237623762, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=202, Percent_Identity=26.2376237623762, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17567345, Length=142, Percent_Identity=28.8732394366197, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=201, Percent_Identity=24.3781094527363, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=153, Percent_Identity=30.718954248366, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=187, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24640492, Length=174, Percent_Identity=28.735632183908, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581726, Length=205, Percent_Identity=26.3414634146341, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281364892, Length=204, Percent_Identity=28.921568627451, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21358495, Length=153, Percent_Identity=28.1045751633987, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357041, Length=150, Percent_Identity=30.6666666666667, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33210; Mature: 33210

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVALIARNAEALENAAREIRGAGGEAIAVVADVSDAGAVDAAADAVVRAWGGIDVWVND
CEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEHHH
AMVSVFAPVMETTAEEYRRVTEVTYLGYVHGTRAALRHMLPRNRGHVVQVGSALCYRSIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHCCC
LQSAYCAAKAAVRGFTDALRCELAHDRSRVRLSMVHLPAVNTPQFELVRTRLPGHPKPVP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCC
PIYQPEVIARAVLAVVRRPRRELWVTWSTVRAILGQRTIPGLLDRYLGRIGYRAQQADRP
CCCCHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCC
PEPGRPDDLDRPVPGDHGAHGEFSAEARRRSASLWLTLHRRSLAAGAVLLAAGAVWASRS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHEEEEEEHHHHHHHHHHHHHHHHHHCCC
VRGAT
CCCCC
>Mature Secondary Structure
MRVALIARNAEALENAAREIRGAGGEAIAVVADVSDAGAVDAAADAVVRAWGGIDVWVND
CEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEHHH
AMVSVFAPVMETTAEEYRRVTEVTYLGYVHGTRAALRHMLPRNRGHVVQVGSALCYRSIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHCCC
LQSAYCAAKAAVRGFTDALRCELAHDRSRVRLSMVHLPAVNTPQFELVRTRLPGHPKPVP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCC
PIYQPEVIARAVLAVVRRPRRELWVTWSTVRAILGQRTIPGLLDRYLGRIGYRAQQADRP
CCCCHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCC
PEPGRPDDLDRPVPGDHGAHGEFSAEARRRSASLWLTLHRRSLAAGAVLLAAGAVWASRS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHEEEEEEHHHHHHHHHHHHHHHHHHCCC
VRGAT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]