Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

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The map label for this gene is 220917884

Identifier: 220917884

GI number: 220917884

Start: 3074502

End: 3075176

Strand: Direct

Name: 220917884

Synonym: A2cp1_2785

Alternate gene names: NA

Gene position: 3074502-3075176 (Clockwise)

Preceding gene: 220917883

Following gene: 220917900

Centisome position: 61.13

GC content: 78.96

Gene sequence:

>675_bases
ATGCCACGGCGCGCTCCCCCCGGCGGCACCGCCGCCCCGCTCGTGCCCGCGCGGGCCACGCTGCCGGCGCTCCGGCGCGC
CGCCGCGGGCTGCACCGCCTGTCCGCTGTGGGAGCGCGGGACCCAGACCGTGTTCGGCGCCGGTCGGACTCGCGCGACCG
TGATGCTGGTGGGCGAGCAGCCCGGCAACGACGAGGATCGCGCCGGCGAGCCGTTCGTCGGCCCCGCGGGACGGCTGCTA
GATCGTGCGCTGGCGGCGGCGGGGCTGGACCGGCGCGACGCCTACGTGACCAACGCGGTGAAGCACTTCAAGTGGGAGCC
TCGCGGCAAGCGGCGCATCCACCAGAAGCCGAACGCGGCGGAGGTGCGGGCCTGCCTCCCCTGGCTGGAGGCGGAGATCG
CGGCGGTGCGGCCACGGGCGTTGGTGTGCCTGGGGGCGACCGCGGCGCAGGCGCTGCTCGGGCGCGGCTTCCGGCTGACC
GAGCGGCGCGGGCAGCCGGTGCCCTCGCCGCTGGCGGAGGTCGTGATCGCGACGCTGCACCCGTCGGCCGTGCTGCGCGC
GCCGGACGACGCGGCCCGCCGCGAGGCGCTCGCGGGCCTGGTGGCGGATCTGGCGCGGGTCGCGGAGCTGCTGCGCCGGC
CCCGTTCGCCGGAGCCCCCCGCCACCGGCGCCTGA

Upstream 100 bases:

>100_bases
GCTCGCGGCCCTGGCGCTCGACGCGCCCGGCGCCTAGCGAGCGTCGTCCTCGCCGACGCGCTCGCGGGCGCGGCCGCCGC
CGCCGCCGCAGGTTGTCCGC

Downstream 100 bases:

>100_bases
CCGGCCCGGCTCAGCCGGCCAGGTACTTCTCCAGGATGGGGCGGAGCTTCTCGCGGGTGGCCGGCGCGATCCGGCTGCGA
TCCGACCAGATCGCGAGCGC

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; DNA-Directed DNA Polymerase Protein; Uracil-DNA Glycosylase Family 4 Protein; Phage DNA Polymerase; DNA Polymerase-Related Protein; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil DNA Glycosylase Protein; Bacteriophage-Type DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage Spo1 DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Helicase/Glycosylase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MPRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQPGNDEDRAGEPFVGPAGRLL
DRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAAEVRACLPWLEAEIAAVRPRALVCLGATAAQALLGRGFRLT
ERRGQPVPSPLAEVVIATLHPSAVLRAPDDAARREALAGLVADLARVAELLRRPRSPEPPATGA

Sequences:

>Translated_224_residues
MPRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQPGNDEDRAGEPFVGPAGRLL
DRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAAEVRACLPWLEAEIAAVRPRALVCLGATAAQALLGRGFRLT
ERRGQPVPSPLAEVVIATLHPSAVLRAPDDAARREALAGLVADLARVAELLRRPRSPEPPATGA
>Mature_223_residues
PRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQPGNDEDRAGEPFVGPAGRLLD
RALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAAEVRACLPWLEAEIAAVRPRALVCLGATAAQALLGRGFRLTE
RRGQPVPSPLAEVVIATLHPSAVLRAPDDAARREALAGLVADLARVAELLRRPRSPEPPATGA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 23757; Mature: 23625

Theoretical pI: Translated: 11.63; Mature: 11.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEEECC
PGNDEDRAGEPFVGPAGRLLDRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCHH
EVRACLPWLEAEIAAVRPRALVCLGATAAQALLGRGFRLTERRGQPVPSPLAEVVIATLH
HHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCEEHHHCCCCCCHHHHHHHHHHCC
PSAVLRAPDDAARREALAGLVADLARVAELLRRPRSPEPPATGA
CHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEEECC
PGNDEDRAGEPFVGPAGRLLDRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCHH
EVRACLPWLEAEIAAVRPRALVCLGATAAQALLGRGFRLTERRGQPVPSPLAEVVIATLH
HHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCEEHHHCCCCCCHHHHHHHHHHCC
PSAVLRAPDDAARREALAGLVADLARVAELLRRPRSPEPPATGA
CHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA