| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917884
Identifier: 220917884
GI number: 220917884
Start: 3074502
End: 3075176
Strand: Direct
Name: 220917884
Synonym: A2cp1_2785
Alternate gene names: NA
Gene position: 3074502-3075176 (Clockwise)
Preceding gene: 220917883
Following gene: 220917900
Centisome position: 61.13
GC content: 78.96
Gene sequence:
>675_bases ATGCCACGGCGCGCTCCCCCCGGCGGCACCGCCGCCCCGCTCGTGCCCGCGCGGGCCACGCTGCCGGCGCTCCGGCGCGC CGCCGCGGGCTGCACCGCCTGTCCGCTGTGGGAGCGCGGGACCCAGACCGTGTTCGGCGCCGGTCGGACTCGCGCGACCG TGATGCTGGTGGGCGAGCAGCCCGGCAACGACGAGGATCGCGCCGGCGAGCCGTTCGTCGGCCCCGCGGGACGGCTGCTA GATCGTGCGCTGGCGGCGGCGGGGCTGGACCGGCGCGACGCCTACGTGACCAACGCGGTGAAGCACTTCAAGTGGGAGCC TCGCGGCAAGCGGCGCATCCACCAGAAGCCGAACGCGGCGGAGGTGCGGGCCTGCCTCCCCTGGCTGGAGGCGGAGATCG CGGCGGTGCGGCCACGGGCGTTGGTGTGCCTGGGGGCGACCGCGGCGCAGGCGCTGCTCGGGCGCGGCTTCCGGCTGACC GAGCGGCGCGGGCAGCCGGTGCCCTCGCCGCTGGCGGAGGTCGTGATCGCGACGCTGCACCCGTCGGCCGTGCTGCGCGC GCCGGACGACGCGGCCCGCCGCGAGGCGCTCGCGGGCCTGGTGGCGGATCTGGCGCGGGTCGCGGAGCTGCTGCGCCGGC CCCGTTCGCCGGAGCCCCCCGCCACCGGCGCCTGA
Upstream 100 bases:
>100_bases GCTCGCGGCCCTGGCGCTCGACGCGCCCGGCGCCTAGCGAGCGTCGTCCTCGCCGACGCGCTCGCGGGCGCGGCCGCCGC CGCCGCCGCAGGTTGTCCGC
Downstream 100 bases:
>100_bases CCGGCCCGGCTCAGCCGGCCAGGTACTTCTCCAGGATGGGGCGGAGCTTCTCGCGGGTGGCCGGCGCGATCCGGCTGCGA TCCGACCAGATCGCGAGCGC
Product: phage SPO1 DNA polymerase-like protein
Products: diphosphate; DNAn+1
Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; DNA-Directed DNA Polymerase Protein; Uracil-DNA Glycosylase Family 4 Protein; Phage DNA Polymerase; DNA Polymerase-Related Protein; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil DNA Glycosylase Protein; Bacteriophage-Type DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage Spo1 DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Helicase/Glycosylase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MPRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQPGNDEDRAGEPFVGPAGRLL DRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAAEVRACLPWLEAEIAAVRPRALVCLGATAAQALLGRGFRLT ERRGQPVPSPLAEVVIATLHPSAVLRAPDDAARREALAGLVADLARVAELLRRPRSPEPPATGA
Sequences:
>Translated_224_residues MPRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQPGNDEDRAGEPFVGPAGRLL DRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAAEVRACLPWLEAEIAAVRPRALVCLGATAAQALLGRGFRLT ERRGQPVPSPLAEVVIATLHPSAVLRAPDDAARREALAGLVADLARVAELLRRPRSPEPPATGA >Mature_223_residues PRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQPGNDEDRAGEPFVGPAGRLLD RALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAAEVRACLPWLEAEIAAVRPRALVCLGATAAQALLGRGFRLTE RRGQPVPSPLAEVVIATLHPSAVLRAPDDAARREALAGLVADLARVAELLRRPRSPEPPATGA
Specific function: Unknown
COG id: COG1573
COG function: function code L; Uracil-DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.7
Molecular weight: Translated: 23757; Mature: 23625
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEEECC PGNDEDRAGEPFVGPAGRLLDRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCHH EVRACLPWLEAEIAAVRPRALVCLGATAAQALLGRGFRLTERRGQPVPSPLAEVVIATLH HHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCEEHHHCCCCCCHHHHHHHHHHCC PSAVLRAPDDAARREALAGLVADLARVAELLRRPRSPEPPATGA CHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PRRAPPGGTAAPLVPARATLPALRRAAAGCTACPLWERGTQTVFGAGRTRATVMLVGEQ CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEEECC PGNDEDRAGEPFVGPAGRLLDRALAAAGLDRRDAYVTNAVKHFKWEPRGKRRIHQKPNAA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCHH EVRACLPWLEAEIAAVRPRALVCLGATAAQALLGRGFRLTERRGQPVPSPLAEVVIATLH HHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCEEHHHCCCCCCHHHHHHHHHHCC PSAVLRAPDDAARREALAGLVADLARVAELLRRPRSPEPPATGA CHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxynucleoside triphosphate; DNAn
Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA