| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 220917857
GI number: 220917857
Start: 3043464
End: 3044174
Strand: Direct
Name: fabG [H]
Synonym: A2cp1_2758
Alternate gene names: 220917857
Gene position: 3043464-3044174 (Clockwise)
Preceding gene: 220917856
Following gene: 220917859
Centisome position: 60.51
GC content: 77.5
Gene sequence:
>711_bases ATGACCGGATCCGATCGCCCGCCCCGCCGCACCGCGCTCGTCACGGGCGCGAACCGTGGGATCGGGCTGGCGGTCGCCGA GGCGCTGGCCGCCCGCGGGATGGCGGTGCTCCTGGGGACGCGCGATGCGGCGGCCGGCGCCCACGCCGCCGCCGCGCTCT CGGCCCGCGGTCACGCCGCCCGCGCCCTCGCCATCGACCTGTCCCGTCCCGCCTCGGTGGACGCCGCCCTCGCGCAGCTC GCCGCCGACGCCGTCCACGTGGACGTGCTCGTGAACAACGCCGGCGTGTACCCGCAGGGCGGCGTGCTGAGCGCGCCGGA GGAGGCCTTCCGCGAGGCGATGGAGGTCCACCTCTTCGGCCCGCTCCGCCTGTGCCGCGCGCTCGTGCCGGCGATGCAGC GCGCCGGCTGGGGGCGCGTGGTGAACGTCTCGTCGGGCTCCGGATCGTTCGGCGAGGGGCTGGAGGGCCCGGCGCCGTAC AGCATCTCCAAGGCGGCGCTCGACGCGCTCACGCTCAAGCTCTCCGGCGTGACCGGCCCCGCGGTGAAGGTGAACGCGGC GTGCCCGGGGTGGGTCCGGACGCGCATGGGCGGCGAGGAGGCCCCCCGCTCGGTGGAGCGCGGCGCGGAGGGGATCGTCT GGCTGGCCACGCTCCCGGACGACGGCCCGAGCGGCGGGTTCTTCCGCGACGGGCGGCTCATCCCCTGGTGA
Upstream 100 bases:
>100_bases CGGACGATCACGGCGCCGAACTGACCCGCCGCTGCGCGGGCGCGCGCGGGCCCGCGCCCGGGGGCTTTACTCGCGACCGG ATCCGGCGCATGCCGTCGGC
Downstream 100 bases:
>100_bases TCAGTGCGCCTGCCCCGGCTGATCCTCGCCGGACGGCTCGCCGGCGCCGTGAACGGCGAGGTCCTCGCGCGGCAGCTCGC GCGGCACCTCCAGCACGAAG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTGSDRPPRRTALVTGANRGIGLAVAEALAARGMAVLLGTRDAAAGAHAAAALSARGHAARALAIDLSRPASVDAALAQL AADAVHVDVLVNNAGVYPQGGVLSAPEEAFREAMEVHLFGPLRLCRALVPAMQRAGWGRVVNVSSGSGSFGEGLEGPAPY SISKAALDALTLKLSGVTGPAVKVNAACPGWVRTRMGGEEAPRSVERGAEGIVWLATLPDDGPSGGFFRDGRLIPW
Sequences:
>Translated_236_residues MTGSDRPPRRTALVTGANRGIGLAVAEALAARGMAVLLGTRDAAAGAHAAAALSARGHAARALAIDLSRPASVDAALAQL AADAVHVDVLVNNAGVYPQGGVLSAPEEAFREAMEVHLFGPLRLCRALVPAMQRAGWGRVVNVSSGSGSFGEGLEGPAPY SISKAALDALTLKLSGVTGPAVKVNAACPGWVRTRMGGEEAPRSVERGAEGIVWLATLPDDGPSGGFFRDGRLIPW >Mature_235_residues TGSDRPPRRTALVTGANRGIGLAVAEALAARGMAVLLGTRDAAAGAHAAAALSARGHAARALAIDLSRPASVDAALAQLA ADAVHVDVLVNNAGVYPQGGVLSAPEEAFREAMEVHLFGPLRLCRALVPAMQRAGWGRVVNVSSGSGSFGEGLEGPAPYS ISKAALDALTLKLSGVTGPAVKVNAACPGWVRTRMGGEEAPRSVERGAEGIVWLATLPDDGPSGGFFRDGRLIPW
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4502601, Length=274, Percent_Identity=32.1167883211679, Blast_Score=98, Evalue=7e-21, Organism=Homo sapiens, GI32483357, Length=200, Percent_Identity=32, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI210032110, Length=199, Percent_Identity=30.6532663316583, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI20149619, Length=191, Percent_Identity=27.7486910994764, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI126723191, Length=210, Percent_Identity=30, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI225579078, Length=210, Percent_Identity=32.3809523809524, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI10190704, Length=206, Percent_Identity=29.6116504854369, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI40254992, Length=184, Percent_Identity=30.9782608695652, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI10190746, Length=266, Percent_Identity=28.1954887218045, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI5031737, Length=198, Percent_Identity=30.3030303030303, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=30.3030303030303, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1787335, Length=189, Percent_Identity=36.5079365079365, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI87082100, Length=204, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1790717, Length=188, Percent_Identity=26.5957446808511, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI2367175, Length=239, Percent_Identity=31.3807531380753, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787905, Length=151, Percent_Identity=31.7880794701987, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1786701, Length=193, Percent_Identity=31.0880829015544, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=27.0833333333333, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17558994, Length=252, Percent_Identity=28.1746031746032, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17561402, Length=229, Percent_Identity=27.5109170305677, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193207563, Length=249, Percent_Identity=29.718875502008, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=31.640625, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71994600, Length=257, Percent_Identity=29.1828793774319, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17541382, Length=248, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17558990, Length=253, Percent_Identity=29.2490118577075, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17558992, Length=242, Percent_Identity=28.099173553719, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567345, Length=196, Percent_Identity=23.9795918367347, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193203117, Length=191, Percent_Identity=25.6544502617801, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193203115, Length=191, Percent_Identity=25.6544502617801, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17560676, Length=191, Percent_Identity=28.7958115183246, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=216, Percent_Identity=31.4814814814815, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI23397609, Length=189, Percent_Identity=35.4497354497354, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI21358495, Length=198, Percent_Identity=28.2828282828283, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24640547, Length=249, Percent_Identity=28.9156626506024, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571526, Length=189, Percent_Identity=30.6878306878307, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355319, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24656154, Length=259, Percent_Identity=30.8880308880309, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922628, Length=259, Percent_Identity=30.8880308880309, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21357041, Length=189, Percent_Identity=29.1005291005291, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45554248, Length=261, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24640117, Length=261, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24643142, Length=194, Percent_Identity=32.9896907216495, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24639444, Length=191, Percent_Identity=31.413612565445, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24647931, Length=224, Percent_Identity=28.125, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28571387, Length=209, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24644339, Length=192, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI18859837, Length=185, Percent_Identity=30.8108108108108, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 24029; Mature: 23897
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSDRPPRRTALVTGANRGIGLAVAEALAARGMAVLLGTRDAAAGAHAAAALSARGHAA CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCHHCCHHHHHHHHCCCCCE RALAIDLSRPASVDAALAQLAADAVHVDVLVNNAGVYPQGGVLSAPEEAFREAMEVHLFG EEEEEECCCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEECCC PLRLCRALVPAMQRAGWGRVVNVSSGSGSFGEGLEGPAPYSISKAALDALTLKLSGVTGP HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCC AVKVNAACPGWVRTRMGGEEAPRSVERGAEGIVWLATLPDDGPSGGFFRDGRLIPW CEEEECCCCCHHHHHCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCC >Mature Secondary Structure TGSDRPPRRTALVTGANRGIGLAVAEALAARGMAVLLGTRDAAAGAHAAAALSARGHAA CCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCHHCCHHHHHHHHCCCCCE RALAIDLSRPASVDAALAQLAADAVHVDVLVNNAGVYPQGGVLSAPEEAFREAMEVHLFG EEEEEECCCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEECCC PLRLCRALVPAMQRAGWGRVVNVSSGSGSFGEGLEGPAPYSISKAALDALTLKLSGVTGP HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCC AVKVNAACPGWVRTRMGGEEAPRSVERGAEGIVWLATLPDDGPSGGFFRDGRLIPW CEEEECCCCCHHHHHCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1556094; 8905232; 9278503; 1314802 [H]