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The map label for this gene is ychA [C]

Identifier: 220917844

GI number: 220917844

Start: 3027036

End: 3027884

Strand: Reverse

Name: ychA [C]

Synonym: A2cp1_2745

Alternate gene names: 220917844

Gene position: 3027884-3027036 (Counterclockwise)

Preceding gene: 220917845

Following gene: 220917840

Centisome position: 60.2

GC content: 74.91

Gene sequence:

>849_bases
ATGACGGCGACGAGAGATCTGGAGGGCCGTGCGCGCGCGCGCTTCGCCGAGCTCCTGGGACGCGACCCGGTCCCGCTCGA
CGAGGCGGCGCTCGCCATCGCGCAGGAGGAGTACCCGGCGCTCGAGCCCGAGGCGTACCTCACCCGCCTCGACGAACTCG
CCGCGCGCGTGGTGCGGCGGGTCCCCGGGCCGGTGCGCGCGGCGTCTGCGCTCCGCGCGTTGCGCGAGGTGCTCCACGAC
GAGGAGGGGCTCCGCGGCAACGACGACGACTACTACGACCCCCGCAACTCGTTCCTCAACGACGTCCTGGATCGCCGCCT
CGGGATCCCCATCACGCTGGCGCTGGTGTACATGGAGGTCGGGCGGCGCGCCGGGCTGCGGCTGGAGGGGGTCGGCTTCC
CGGGCCACTTCCTCGCGAAGTACGTCTCGCCCGGCGGCGTGGAGGTGTTCGTGGACGCCTACCACGGCGGCGAGATGCTC
TCGGCCGACGAGTGCGTGGCGCGCTACAAGGCGCGCACCGGCGGCAAGGACCTCGACGCGCGCTACCTCGCCGCGGTCTC
GCCGCGCCAGCTCCTCGCGCGCATGCTGCAGAACCTGAAGCGCGTCTACGCGGAGCGGAAGGACGACGTCCGGCTGTTCT
GGGTGCTCGACCGCATCCTGCTGGTCACCCCGGACCAGCGCGAGGCGCTGCGCGATCGCGGCCTCGCCGCGGCGCGGCTG
GGCGGGGCCGCCGCCGCCATCCGCGATCTCGAGGCGTACCTGTCGCTCGCGCCCGCGGCCGGAGACGCCGAGGAGGTGCG
GGCGGCGGTGGCCGGGCTGCGGGCCGGCCGCGGCGCGCTGCTCAACTGA

Upstream 100 bases:

>100_bases
CGCCCGGGGCGGCGGTGTCCCCGGAGCTGGCGGCGCAGGCGCGCGCGCTGGCGCAGGCGGAGCGGCGGTACCACGAGGAC
GTGGCGGCGCGGGTGCCCTG

Downstream 100 bases:

>100_bases
CCGGCGGCTCGCGGCCCTCCAGGCGCGGGAGCCGGAGCCGCTCCACCGGCGTGCCGCCGACCAGGTGCCGCTCCACGATC
TCCGGCACGTCGGCGGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTATRDLEGRARARFAELLGRDPVPLDEAALAIAQEEYPALEPEAYLTRLDELAARVVRRVPGPVRAASALRALREVLHD
EEGLRGNDDDYYDPRNSFLNDVLDRRLGIPITLALVYMEVGRRAGLRLEGVGFPGHFLAKYVSPGGVEVFVDAYHGGEML
SADECVARYKARTGGKDLDARYLAAVSPRQLLARMLQNLKRVYAERKDDVRLFWVLDRILLVTPDQREALRDRGLAAARL
GGAAAAIRDLEAYLSLAPAAGDAEEVRAAVAGLRAGRGALLN

Sequences:

>Translated_282_residues
MTATRDLEGRARARFAELLGRDPVPLDEAALAIAQEEYPALEPEAYLTRLDELAARVVRRVPGPVRAASALRALREVLHD
EEGLRGNDDDYYDPRNSFLNDVLDRRLGIPITLALVYMEVGRRAGLRLEGVGFPGHFLAKYVSPGGVEVFVDAYHGGEML
SADECVARYKARTGGKDLDARYLAAVSPRQLLARMLQNLKRVYAERKDDVRLFWVLDRILLVTPDQREALRDRGLAAARL
GGAAAAIRDLEAYLSLAPAAGDAEEVRAAVAGLRAGRGALLN
>Mature_281_residues
TATRDLEGRARARFAELLGRDPVPLDEAALAIAQEEYPALEPEAYLTRLDELAARVVRRVPGPVRAASALRALREVLHDE
EGLRGNDDDYYDPRNSFLNDVLDRRLGIPITLALVYMEVGRRAGLRLEGVGFPGHFLAKYVSPGGVEVFVDAYHGGEMLS
ADECVARYKARTGGKDLDARYLAAVSPRQLLARMLQNLKRVYAERKDDVRLFWVLDRILLVTPDQREALRDRGLAAARLG
GAAAAIRDLEAYLSLAPAAGDAEEVRAAVAGLRAGRGALLN

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306502, Length=141, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI16306500, Length=141, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30929; Mature: 30798

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATRDLEGRARARFAELLGRDPVPLDEAALAIAQEEYPALEPEAYLTRLDELAARVVRR
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VPGPVRAASALRALREVLHDEEGLRGNDDDYYDPRNSFLNDVLDRRLGIPITLALVYMEV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
GRRAGLRLEGVGFPGHFLAKYVSPGGVEVFVDAYHGGEMLSADECVARYKARTGGKDLDA
HHHCCCEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCH
RYLAAVSPRQLLARMLQNLKRVYAERKDDVRLFWVLDRILLVTPDQREALRDRGLAAARL
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
GGAAAAIRDLEAYLSLAPAAGDAEEVRAAVAGLRAGRGALLN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TATRDLEGRARARFAELLGRDPVPLDEAALAIAQEEYPALEPEAYLTRLDELAARVVRR
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VPGPVRAASALRALREVLHDEEGLRGNDDDYYDPRNSFLNDVLDRRLGIPITLALVYMEV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
GRRAGLRLEGVGFPGHFLAKYVSPGGVEVFVDAYHGGEMLSADECVARYKARTGGKDLDA
HHHCCCEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCH
RYLAAVSPRQLLARMLQNLKRVYAERKDDVRLFWVLDRILLVTPDQREALRDRGLAAARL
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
GGAAAAIRDLEAYLSLAPAAGDAEEVRAAVAGLRAGRGALLN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]