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The map label for this gene is fdx4 [H]

Identifier: 220917843

GI number: 220917843

Start: 3026705

End: 3027043

Strand: Direct

Name: fdx4 [H]

Synonym: A2cp1_2744

Alternate gene names: 220917843

Gene position: 3026705-3027043 (Clockwise)

Preceding gene: 220917842

Following gene: 220917846

Centisome position: 60.18

GC content: 74.63

Gene sequence:

>339_bases
ATGCGCTTCCGCCATCACGTCTTCGTCTGCGAGAACCACCGGGACCCGTCGGATCCGCGCGGCGCCTGCGGCAACAAGGG
CAGCGAGGCGATCCGCGCCGCGCTGAAGGCGGAGGTCGCCCGGCGCGGGCTGAAGGCGCAGGTGCGCGTGAACGGCGCCG
GGTGCCTGGACGCGTGCGCGTTCGGCCCGTCGATCGTGGTCTACCCGGAGGGCGTCTGGTACGGCCACGTCTCGCCCGCC
GACGTGCCGGAGATCGTGGAGCGGCACCTGGTCGGCGGCACGCCGGTGGAGCGGCTCCGGCTCCCGCGCCTGGAGGGCCG
CGAGCCGCCGGTCAGTTGA

Upstream 100 bases:

>100_bases
GCCGTCTCGGGCGGCGCGCTGCTGGTCGTGCCGCGCGGCCAGCTCGTGCCGCGCGATCCCTGACCTGGCGGCGCGCGGGC
GCCAGCGCTAGATCCGCGCC

Downstream 100 bases:

>100_bases
GCAGCGCGCCGCGGCCGGCCCGCAGCCCGGCCACCGCCGCCCGCACCTCCTCGGCGTCTCCGGCCGCGGGCGCGAGCGAC
AGGTACGCCTCGAGATCGCG

Product: ferredoxin

Products: NA

Alternate protein names: AaFd4 [H]

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MRFRHHVFVCENHRDPSDPRGACGNKGSEAIRAALKAEVARRGLKAQVRVNGAGCLDACAFGPSIVVYPEGVWYGHVSPA
DVPEIVERHLVGGTPVERLRLPRLEGREPPVS

Sequences:

>Translated_112_residues
MRFRHHVFVCENHRDPSDPRGACGNKGSEAIRAALKAEVARRGLKAQVRVNGAGCLDACAFGPSIVVYPEGVWYGHVSPA
DVPEIVERHLVGGTPVERLRLPRLEGREPPVS
>Mature_112_residues
MRFRHHVFVCENHRDPSDPRGACGNKGSEAIRAALKAEVARRGLKAQVRVNGAGCLDACAFGPSIVVYPEGVWYGHVSPA
DVPEIVERHLVGGTPVERLRLPRLEGREPPVS

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 12203; Mature: 12203

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRHHVFVCENHRDPSDPRGACGNKGSEAIRAALKAEVARRGLKAQVRVNGAGCLDACA
CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHC
FGPSIVVYPEGVWYGHVSPADVPEIVERHLVGGTPVERLRLPRLEGREPPVS
CCCEEEEEECCEEECCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRFRHHVFVCENHRDPSDPRGACGNKGSEAIRAALKAEVARRGLKAQVRVNGAGCLDACA
CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHC
FGPSIVVYPEGVWYGHVSPADVPEIVERHLVGGTPVERLRLPRLEGREPPVS
CCCEEEEEECCEEECCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320; 10441520; 10884354; 12089152 [H]