Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917825
Identifier: 220917825
GI number: 220917825
Start: 3004873
End: 3005763
Strand: Reverse
Name: 220917825
Synonym: A2cp1_2726
Alternate gene names: NA
Gene position: 3005763-3004873 (Counterclockwise)
Preceding gene: 220917832
Following gene: 220917824
Centisome position: 59.76
GC content: 71.94
Gene sequence:
>891_bases ATGATCCCGTCCGTCCGCACCGGCGCCGCGCTGCTCTCGCAGGGCGCCGCGCTCGCCGCCGATCTCGCCCAGGTCGCCGC GCCGCGCACCATCCGGGCCGCCAGCGCCGCCGGCGTCGGGAAGGGCGGCGCCGTGATCGCCGCCGCGGCGGCCGCGCTCC CCTCCGCGAAGAAGACCTCGGCGAAGAAGACGCGGCGGAGCTCCGGGGCGGGGTACGCCTCGGGCGCGAAGGGAACGACG AAGTCGGGCGCGGCGAAGAAGCCGTCGTCCTCGCGGTCCACCGGCGCGCTCGCGTTCCTCGACGATCCGAGGCTCTCGAT CGAGGAGAAGCTGTTCCGCTTCATGATGTACGTGCAGGACCGCTTCGACCGGGACGTCGAGCAGAAGATGAAGGAGGCGG CGGGGAAGGCCTCCGGCACGAGCGGCTCGTCCGGCGCCAAGAAGAAGAAGGGCGGGCCCTTCGCCAAGCTGGCCGGCGCG CTCAAGACCGCGTTCCCGGCGCTCGGCATGTCGATGGAGATCCTGAACGACAAGAACGTCCAGGCGCTGGTGAAGACGCT GGGCGGGCCCGCGCTCGCGGCGGGCGCCGCCGCCATGGGGTTCCCGGGGCTCGCGCCCGTGCTCGCCAAGGCCGGCCCGC AGCTCGCGGGCGTGGCGTTCGACCTGGCGGCAGCGTTCAAGGACGCGCCGGCGAGCGGCTCGAGCGGCACCGGCGGGACC GGCGGCACGGGCAGCACCGGCTCGGCGGACTCGCCCGAGATCGATCGCAAGAAGATGATGGAGCTGCAGTACGCGATGGA GAAGCAGAAGGAGATGTTCACGCTCGTCTCCAACGTCCTCCGCTCGCTGCACGACATGAAGATGTCGGCGGTGCACAACA TCCGCTCCTGA
Upstream 100 bases:
>100_bases ACCGCGCGGGATCCGGGCGCCCGGCGCTGGCACGGGGCGCGCTCCGGGGAAGGGTGGGCGCCGCGAGGCGCACCGCCCAC CCCATCCGAAAGGAACCCAG
Downstream 100 bases:
>100_bases GGCGCGCCATGGACGACGCGATCGAGACGGCGGTCGGGGGGCGCACGCCCACGCTGGCCGAGGTGCAGGGGATGACCCAG GAGCTGGGCGACGCCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MIPSVRTGAALLSQGAALAADLAQVAAPRTIRAASAAGVGKGGAVIAAAAAALPSAKKTSAKKTRRSSGAGYASGAKGTT KSGAAKKPSSSRSTGALAFLDDPRLSIEEKLFRFMMYVQDRFDRDVEQKMKEAAGKASGTSGSSGAKKKKGGPFAKLAGA LKTAFPALGMSMEILNDKNVQALVKTLGGPALAAGAAAMGFPGLAPVLAKAGPQLAGVAFDLAAAFKDAPASGSSGTGGT GGTGSTGSADSPEIDRKKMMELQYAMEKQKEMFTLVSNVLRSLHDMKMSAVHNIRS
Sequences:
>Translated_296_residues MIPSVRTGAALLSQGAALAADLAQVAAPRTIRAASAAGVGKGGAVIAAAAAALPSAKKTSAKKTRRSSGAGYASGAKGTT KSGAAKKPSSSRSTGALAFLDDPRLSIEEKLFRFMMYVQDRFDRDVEQKMKEAAGKASGTSGSSGAKKKKGGPFAKLAGA LKTAFPALGMSMEILNDKNVQALVKTLGGPALAAGAAAMGFPGLAPVLAKAGPQLAGVAFDLAAAFKDAPASGSSGTGGT GGTGSTGSADSPEIDRKKMMELQYAMEKQKEMFTLVSNVLRSLHDMKMSAVHNIRS >Mature_296_residues MIPSVRTGAALLSQGAALAADLAQVAAPRTIRAASAAGVGKGGAVIAAAAAALPSAKKTSAKKTRRSSGAGYASGAKGTT KSGAAKKPSSSRSTGALAFLDDPRLSIEEKLFRFMMYVQDRFDRDVEQKMKEAAGKASGTSGSSGAKKKKGGPFAKLAGA LKTAFPALGMSMEILNDKNVQALVKTLGGPALAAGAAAMGFPGLAPVLAKAGPQLAGVAFDLAAAFKDAPASGSSGTGGT GGTGSTGSADSPEIDRKKMMELQYAMEKQKEMFTLVSNVLRSLHDMKMSAVHNIRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29824; Mature: 29824
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSVRTGAALLSQGAALAADLAQVAAPRTIRAASAAGVGKGGAVIAAAAAALPSAKKTS CCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHH AKKTRRSSGAGYASGAKGTTKSGAAKKPSSSRSTGALAFLDDPRLSIEEKLFRFMMYVQD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH RFDRDVEQKMKEAAGKASGTSGSSGAKKKKGGPFAKLAGALKTAFPALGMSMEILNDKNV HHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHH QALVKTLGGPALAAGAAAMGFPGLAPVLAKAGPQLAGVAFDLAAAFKDAPASGSSGTGGT HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC GGTGSTGSADSPEIDRKKMMELQYAMEKQKEMFTLVSNVLRSLHDMKMSAVHNIRS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIPSVRTGAALLSQGAALAADLAQVAAPRTIRAASAAGVGKGGAVIAAAAAALPSAKKTS CCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHH AKKTRRSSGAGYASGAKGTTKSGAAKKPSSSRSTGALAFLDDPRLSIEEKLFRFMMYVQD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH RFDRDVEQKMKEAAGKASGTSGSSGAKKKKGGPFAKLAGALKTAFPALGMSMEILNDKNV HHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHH QALVKTLGGPALAAGAAAMGFPGLAPVLAKAGPQLAGVAFDLAAAFKDAPASGSSGTGGT HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC GGTGSTGSADSPEIDRKKMMELQYAMEKQKEMFTLVSNVLRSLHDMKMSAVHNIRS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA