BacMap

Definition	Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession	NC_011891
Length	5,029,329

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The map label for this gene is cbpA [H]

Identifier: 220917764

GI number: 220917764

Start: 2939880

End: 2940836

Strand: Direct

Name: cbpA [H]

Synonym: A2cp1_2665

Alternate gene names: 220917764

Gene position: 2939880-2940836 (Clockwise)

Preceding gene: 220917744

Following gene: 220917765

Centisome position: 58.45

GC content: 73.35

Gene sequence:

>957_bases
GTGCCAGAGCACGACCTCTACGAGATCATCGGAGTTCCACGCACCGCGACCCACGACGAGATCAAGCGCGCCTACCGCAA
GCTCGCCAGGAAGTACCACCCCGACGTGAACCCGGGGGACAAGGCGGCGGAGGAGCGCTTCAAGGAGGTCACGGCGGCGT
TCGAGGTGCTCTCCGACGAGAAGCGCCGGAAGCTGTACGACGAGTTCGGACCGGACTCGCTGCGCTCCGGGTTCGACGAG
AAGAAGGCCGAGCAGTACCGGCAGTGGAAGCGGCACGGCGCGCCGAACGGCGGGATGCCGTTCGACTTCGGCGACTTCTC
CACGGTGAACGTGGGCGACTACGGCGCGTTCGACTTCGGGTCGATCTTCGGCGACCTGTTCGGCGGCGCGCGCGGCGGGC
GGGTGCGGCGAGGCCCCATCCCGTCCCAGGGCGCCCACGCGGAGGCGGAGATCGCCATCGACCTGCGCGACGCGGTGCTC
GGCGCCGAGCGCGACCTGCGCGTGGACGGGCGCACGCTGCGCGTGAAGATCCCGGCCGGCGTGACCGACGGCTCGCGCAT
CCGCCTGGGCGGCCAGGGCGGGCGCGGGGCCCACGGCGGCCCGGCCGGCGACCTGTACCTGGAGGTCCGGCTGCGCGCGC
ACCCGCACCTGCGCCGGGAGGGGCGCGACCTCTACCTCGATCTCCCCGTCACCATCCCGGAGGCCGCGCTCGGGGCCGAG
GTGGAGCTGCCCACGTTCGAGGGCCCGGTCCGGCTGCGCGTGCCGCCGGGCGCGCAGAGCGGAATGCAGCTCCGGCTCCG
CGGCAAGGGGATGCCGGACCTGCGGGGCGGGCCGCGCGGCGATCTGTACGCGGTGGTCCAGCTGCGCCTGCCGCCGGATG
GGCCTGCGCTGCACGAGGCCGTGAAGCCGCTGGCCGAGCTGTACAAGGACGATCCGCGCGCGGGCATCTCGTTGTAG

Upstream 100 bases:

>100_bases
CCATTGTAGTCAGCGCGGGCCGCGTGGGGAGCCCGTCCGCGCGCGCCGCCCCGGGGCGGCGCGATTTGACCTCCCGCCCG
GGAGCGTTACGTTTCCCCGC

Downstream 100 bases:

>100_bases
AACCTCGTGCCTCCGTCCGCTCCCGCGGGGGCCGGACGCTGGAGCGGGGGTTTCGGAGGTCGGATGGGACTGTTCGATCT
GTTCGGGTCGAAGGAGGAGC

Product: chaperone DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPEHDLYEIIGVPRTATHDEIKRAYRKLARKYHPDVNPGDKAAEERFKEVTAAFEVLSDEKRRKLYDEFGPDSLRSGFDE
KKAEQYRQWKRHGAPNGGMPFDFGDFSTVNVGDYGAFDFGSIFGDLFGGARGGRVRRGPIPSQGAHAEAEIAIDLRDAVL
GAERDLRVDGRTLRVKIPAGVTDGSRIRLGGQGGRGAHGGPAGDLYLEVRLRAHPHLRREGRDLYLDLPVTIPEAALGAE
VELPTFEGPVRLRVPPGAQSGMQLRLRGKGMPDLRGGPRGDLYAVVQLRLPPDGPALHEAVKPLAELYKDDPRAGISL

Sequences:

>Translated_318_residues
MPEHDLYEIIGVPRTATHDEIKRAYRKLARKYHPDVNPGDKAAEERFKEVTAAFEVLSDEKRRKLYDEFGPDSLRSGFDE
KKAEQYRQWKRHGAPNGGMPFDFGDFSTVNVGDYGAFDFGSIFGDLFGGARGGRVRRGPIPSQGAHAEAEIAIDLRDAVL
GAERDLRVDGRTLRVKIPAGVTDGSRIRLGGQGGRGAHGGPAGDLYLEVRLRAHPHLRREGRDLYLDLPVTIPEAALGAE
VELPTFEGPVRLRVPPGAQSGMQLRLRGKGMPDLRGGPRGDLYAVVQLRLPPDGPALHEAVKPLAELYKDDPRAGISL
>Mature_317_residues
PEHDLYEIIGVPRTATHDEIKRAYRKLARKYHPDVNPGDKAAEERFKEVTAAFEVLSDEKRRKLYDEFGPDSLRSGFDEK
KAEQYRQWKRHGAPNGGMPFDFGDFSTVNVGDYGAFDFGSIFGDLFGGARGGRVRRGPIPSQGAHAEAEIAIDLRDAVLG
AERDLRVDGRTLRVKIPAGVTDGSRIRLGGQGGRGAHGGPAGDLYLEVRLRAHPHLRREGRDLYLDLPVTIPEAALGAEV
ELPTFEGPVRLRVPPGAQSGMQLRLRGKGMPDLRGGPRGDLYAVVQLRLPPDGPALHEAVKPLAELYKDDPRAGISL

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI201862518, Length=332, Percent_Identity=31.3253012048193, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI56549115, Length=332, Percent_Identity=31.3253012048193, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI201862587, Length=332, Percent_Identity=31.3253012048193, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI7706495, Length=307, Percent_Identity=28.9902280130293, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI205360838, Length=342, Percent_Identity=26.0233918128655, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI205360840, Length=342, Percent_Identity=26.0233918128655, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI6631085, Length=328, Percent_Identity=28.0487804878049, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI39204547, Length=311, Percent_Identity=27.3311897106109, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI5453690, Length=345, Percent_Identity=26.6666666666667, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI23503241, Length=74, Percent_Identity=54.0540540540541, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI47777312, Length=67, Percent_Identity=58.2089552238806, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI27151736, Length=123, Percent_Identity=41.4634146341463, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI88501736, Length=69, Percent_Identity=53.6231884057971, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI5031741, Length=70, Percent_Identity=52.8571428571429, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=56.0606060606061, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=56.0606060606061, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI29126218, Length=65, Percent_Identity=52.3076923076923, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI21553335, Length=74, Percent_Identity=48.6486486486487, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI4504511, Length=76, Percent_Identity=47.3684210526316, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI45504382, Length=65, Percent_Identity=47.6923076923077, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI24308127, Length=104, Percent_Identity=36.5384615384615, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI9558755, Length=71, Percent_Identity=49.2957746478873, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI194328758, Length=75, Percent_Identity=48, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI194328760, Length=76, Percent_Identity=47.3684210526316, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI56687498, Length=66, Percent_Identity=48.4848484848485, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI194306642, Length=70, Percent_Identity=51.4285714285714, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI194306640, Length=70, Percent_Identity=51.4285714285714, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI68077168, Length=75, Percent_Identity=52, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI68077166, Length=75, Percent_Identity=52, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI118498347, Length=73, Percent_Identity=50.6849315068493, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787235, Length=307, Percent_Identity=39.7394136807818, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1786197, Length=121, Percent_Identity=51.2396694214876, Blast_Score=132, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17534355, Length=332, Percent_Identity=28.6144578313253, Blast_Score=124, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17554644, Length=79, Percent_Identity=49.3670886075949, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI212645553, Length=68, Percent_Identity=47.0588235294118, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI115532378, Length=110, Percent_Identity=39.0909090909091, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17568643, Length=85, Percent_Identity=45.8823529411765, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17507263, Length=68, Percent_Identity=47.0588235294118, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17553096, Length=67, Percent_Identity=44.7761194029851, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17553098, Length=67, Percent_Identity=44.7761194029851, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17554900, Length=143, Percent_Identity=30.0699300699301, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532476, Length=68, Percent_Identity=48.5294117647059, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=74, Percent_Identity=58.1081081081081, Blast_Score=90, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6323870, Length=73, Percent_Identity=46.5753424657534, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6323813, Length=70, Percent_Identity=55.7142857142857, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323119, Length=71, Percent_Identity=52.112676056338, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324321, Length=73, Percent_Identity=45.2054794520548, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322194, Length=83, Percent_Identity=42.1686746987952, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324252, Length=65, Percent_Identity=43.0769230769231, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24658562, Length=338, Percent_Identity=29.2899408284024, Blast_Score=124, Evalue=9e-29,
Organism=Drosophila melanogaster, GI24658555, Length=338, Percent_Identity=29.2899408284024, Blast_Score=124, Evalue=9e-29,
Organism=Drosophila melanogaster, GI85726398, Length=351, Percent_Identity=29.6296296296296, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI18858081, Length=333, Percent_Identity=31.2312312312312, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI19920464, Length=316, Percent_Identity=27.2151898734177, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24654066, Length=71, Percent_Identity=56.3380281690141, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24654070, Length=71, Percent_Identity=56.3380281690141, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24654068, Length=71, Percent_Identity=56.3380281690141, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24654072, Length=71, Percent_Identity=56.3380281690141, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17737735, Length=65, Percent_Identity=56.9230769230769, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28574723, Length=65, Percent_Identity=56.9230769230769, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24668523, Length=65, Percent_Identity=56.9230769230769, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24646562, Length=71, Percent_Identity=52.112676056338, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646560, Length=71, Percent_Identity=52.112676056338, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646558, Length=71, Percent_Identity=52.112676056338, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646556, Length=71, Percent_Identity=52.112676056338, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357547, Length=71, Percent_Identity=52.112676056338, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI20129487, Length=91, Percent_Identity=41.7582417582418, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24584014, Length=91, Percent_Identity=41.7582417582418, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=53.125, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24668492, Length=72, Percent_Identity=45.8333333333333, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45549272, Length=66, Percent_Identity=50, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552813, Length=66, Percent_Identity=50, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45552811, Length=66, Percent_Identity=50, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 34880; Mature: 34749

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEHDLYEIIGVPRTATHDEIKRAYRKLARKYHPDVNPGDKAAEERFKEVTAAFEVLSDE
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KRRKLYDEFGPDSLRSGFDEKKAEQYRQWKRHGAPNGGMPFDFGDFSTVNVGDYGAFDFG
HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHH
SIFGDLFGGARGGRVRRGPIPSQGAHAEAEIAIDLRDAVLGAERDLRVDGRTLRVKIPAG
HHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEEEHHHHHHCCCCCEEECCEEEEEEECCC
VTDGSRIRLGGQGGRGAHGGPAGDLYLEVRLRAHPHLRREGRDLYLDLPVTIPEAALGAE
CCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHCCCCEEEEECCCCCCHHHCCCE
VELPTFEGPVRLRVPPGAQSGMQLRLRGKGMPDLRGGPRGDLYAVVQLRLPPDGPALHEA
EECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHH
VKPLAELYKDDPRAGISL
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PEHDLYEIIGVPRTATHDEIKRAYRKLARKYHPDVNPGDKAAEERFKEVTAAFEVLSDE
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KRRKLYDEFGPDSLRSGFDEKKAEQYRQWKRHGAPNGGMPFDFGDFSTVNVGDYGAFDFG
HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHH
SIFGDLFGGARGGRVRRGPIPSQGAHAEAEIAIDLRDAVLGAERDLRVDGRTLRVKIPAG
HHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEEEHHHHHHCCCCCEEECCEEEEEEECCC
VTDGSRIRLGGQGGRGAHGGPAGDLYLEVRLRAHPHLRREGRDLYLDLPVTIPEAALGAE
CCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHCCCCEEEEECCCCCCHHHCCCE
VELPTFEGPVRLRVPPGAQSGMQLRLRGKGMPDLRGGPRGDLYAVVQLRLPPDGPALHEA
EECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHH
VKPLAELYKDDPRAGISL
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA