Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917747
Identifier: 220917747
GI number: 220917747
Start: 2923435
End: 2926161
Strand: Reverse
Name: 220917747
Synonym: A2cp1_2648
Alternate gene names: NA
Gene position: 2926161-2923435 (Counterclockwise)
Preceding gene: 220917748
Following gene: 220917746
Centisome position: 58.18
GC content: 74.0
Gene sequence:
>2727_bases GTGACCGCACGCAACGCCCTCCTCCTGCTGGCGCTCGCCGCGAGCGCCGGCTGCGGAAGCTCCGCGGCGAAGCCGGACCT CGGGCTGGTGAGCCCGGGCGGCGTGGCCGTGTTCCGCGGCCTCACGACCAAGAACGCCCTCGACCCGGCGCACCCGTACG TCGCGGTCGCGAACTCCGGCCGCGACGAGCTCATCTTCATCGACGCGCTGGACGACGAACCGGTGCTCGCGCCGGTGGTG ATCCGCCCGCTGGCGGTGCCGACGCTCCCCGGCGAGCCGCACCCGACGCTGCTCGCCTCGGCCGGGCTGCACGACGGCCA GAACGCCGACGGCACCGGCCTGCCCGACCTCCTGGTGGTGGTGTCGCCGGGCTCGTCGCGGCTGCAGCTCGTGGCGACCT GGGACCTGGCCACGCACGTGGTGCAGCCGGCCGGGGCGGACCCGCTCGACCTGGGCGCGCTCGCGCCCGGCGCGCAGGTG CTCGACATGATCGCCGTCCCGGTGCTCGAGCCCGGCGCGACCGCCGGCACCTGGCAGGTGGCCCGCGGCAAGGCGCGCGT CCTGGCGAGCATCGCGGGCGGCCGCCTCGCGGTGGTGGACTTCGCGCGGCAGGCGGACGGGAGCATCGCGCCGAGCGGCA CGCCGGCGCTGCAGGACCTCGGCTTCGAGGCGCTCTCGCTGGCCGAGTCGCCCGACCACGACCGCCTGTTCGCGGCCACC GTGGACGAGGTGATCCCGGGGTCGGGCGTCTTCGGCGTCGGCGAGATCGACACCACCGGCGCGGTGGGCTCCTGGACCGT CCGCGCGCTCGACGCGCGCGTCGGCACCACGCTCGTGGCCGCCGCGAAGGTGACCGAACGCTTCGTGGGGGTGCAGGACG GCGACACGTTCTGCGTGCGCCAGCCCGGCGATCCCTTCTGCAAGGCGCCGAACCAGGATCTCCGCGTGTACGCGTTCCTC GATCCGGCCGCTTGCGGGCGCACCGCGCGGATGCCGTGCGGGCTCGCGGTGATCGACCCGGCGCGCGGCGGCCTCATGGC CGATCCGACCGGCGAGATGCCGTACCTCGCGCCGATGGCGGTCCCGAGCATCCCGATCGCGATCGCGATCTCGGGGCCGC CGGCGCTGCCGCCCACCAACGAGCCCAGCGACGTGCAGCTGTCGGCCGCGAACGGCTACATGCTGCTCGCCCCGGGATCG GGCCAGGTGAAGACCACCGGCGTCGCGGTCCTCGCTTCCGGCGACGGGCGCGTCTACATGGTGGACCTGGCGCGCTGGCA CATCCCGCTCAACGCCTCCATCCTCCGCACCAGCACCCGGACCAGCGTCACCGGCGGCACGGTGTTCTCGCCGTCGCTGG TGGTGCCGGACCCCGAGAACCCCGGCAAGTACCTGGTGAAGCCCTCGCGGCTGCGGCTGGGCCTCTGGGACCTCACCGCG TGGCCGACGGTGACGCGACCGACCGCGGCGCTCGCCTCCACCTCGGCCAACATGCCGCGCACGGTGCGCGTCACCCCGGG CTACACCGCGACGGACACCTGGACCGTCCTGTACCAGGGACCGCTCCCCGGGCTCTCGGCGCGGGCAGGCCAGACCGGCG CGACCGCGGACGGCCGCCTCTGGCTCGCGGTCCAGACGCCGCTCCCGCGCTCAGACGGCTCCACGCAGCTGGTGGACGTG GCGCGCCTGTTCGATCCCTCGCTGGCGGTCCACGTCGGCGACATCGCGCAGCTCGCGCCCGCCAGCACGGTGACCGCCTG CCTGACCACCGACCCTGACACCGAGACGCCCAGCACCACCTCCTACGAGACGCGCATCACCGCGATCCTGCCGCCCTCCG CCGCGTACCCGGGCGGCGCGGTGACGCTCGACGAGACGCAGCTCATCGACCTGCGGAACCCGGTCGCCGCCGAGCGGCTG CCCGCGACCCCGGAGTGCATCGCCGCGCTGAAGCAGGTCGCCCCCGCGGGCAACATGCTCGTCACCATCCGCGCCGCGGG CCTGATCGCCGGCGGCGCCTCGATGGGCTACGTGGGGCGGCCGCAGCTCGAGAGCGATCCGACCGCTGCCGATCCGTTCC ACCTGACCTACTCGGCGCTGGCGCCGCCGCCGCTCGGCGAGGACGCGATCAGCTGCCCGATCCTGCCCTGGCCGGCGGAG GCCTACGGTCCGAACGCACCGGCGGCGTTCACGGCCTGCGTGGACGAGGCGTGCCGTTCCGAGTGCGAGCGGCTCGTGCT CGCGCGGAAGGCGCGGCGCCTCTACTATCTGTCCGACCGGTGCCTCGACATCGTGGACGGCCCCAAGGCCTCGGCGACGA AGGGCTGCTGGGTGGACTGGGCGGCCATCGCGGACACGCTCCCGGACGCGAGCGGCCCGATCGTGTCCTTCCACCTCGGC TGCGGCCAGGCGCAGGTGGACGCGAACGGTGACGTGGTCATCGACCCGCGGACCAAGACGGTCGTCGAGGACGTCTGCAC GACCGAGCTCGAGCGCGACATGTCGCTCACGTTCATCACGCAGAGCGGGATCGCGTACGCGTACCGCGGCCCGACCACCG GCTCCAACGCGGCCTCGAGCTTCCCGGTGGCCGCGGTCCCGTTCGACCGCAGCCCGTTCCCGGGGAAGCAGGCGGACGGC TACCGGTTCTTCGTGACCTACTCGGAGAACTTCCTCCTCGACATGTCCCCCGCGACTGCCTACAGCACGTCCAAGGTGAT CCGCTGA
Upstream 100 bases:
>100_bases ACGTGCCGCTCGACAACCCGGGCGAGGCGGCCATCGTCGAGGTGGCCGACCCCAACGATCCGACGCGCCAGGTGCCGCGG CGCCTGGGCCAGGAGCGCCC
Downstream 100 bases:
>100_bases TCCCCGCCCGGGACGCCCTCGTTTGACGGGCGCCCCCCGTCTGCTACGGTGGACGGGAGCGGGGTACGCGGAGGGCGCCC ATGAAATCCGTCCGGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 908; Mature: 907
Protein sequence:
>908_residues MTARNALLLLALAASAGCGSSAAKPDLGLVSPGGVAVFRGLTTKNALDPAHPYVAVANSGRDELIFIDALDDEPVLAPVV IRPLAVPTLPGEPHPTLLASAGLHDGQNADGTGLPDLLVVVSPGSSRLQLVATWDLATHVVQPAGADPLDLGALAPGAQV LDMIAVPVLEPGATAGTWQVARGKARVLASIAGGRLAVVDFARQADGSIAPSGTPALQDLGFEALSLAESPDHDRLFAAT VDEVIPGSGVFGVGEIDTTGAVGSWTVRALDARVGTTLVAAAKVTERFVGVQDGDTFCVRQPGDPFCKAPNQDLRVYAFL DPAACGRTARMPCGLAVIDPARGGLMADPTGEMPYLAPMAVPSIPIAIAISGPPALPPTNEPSDVQLSAANGYMLLAPGS GQVKTTGVAVLASGDGRVYMVDLARWHIPLNASILRTSTRTSVTGGTVFSPSLVVPDPENPGKYLVKPSRLRLGLWDLTA WPTVTRPTAALASTSANMPRTVRVTPGYTATDTWTVLYQGPLPGLSARAGQTGATADGRLWLAVQTPLPRSDGSTQLVDV ARLFDPSLAVHVGDIAQLAPASTVTACLTTDPDTETPSTTSYETRITAILPPSAAYPGGAVTLDETQLIDLRNPVAAERL PATPECIAALKQVAPAGNMLVTIRAAGLIAGGASMGYVGRPQLESDPTAADPFHLTYSALAPPPLGEDAISCPILPWPAE AYGPNAPAAFTACVDEACRSECERLVLARKARRLYYLSDRCLDIVDGPKASATKGCWVDWAAIADTLPDASGPIVSFHLG CGQAQVDANGDVVIDPRTKTVVEDVCTTELERDMSLTFITQSGIAYAYRGPTTGSNAASSFPVAAVPFDRSPFPGKQADG YRFFVTYSENFLLDMSPATAYSTSKVIR
Sequences:
>Translated_908_residues MTARNALLLLALAASAGCGSSAAKPDLGLVSPGGVAVFRGLTTKNALDPAHPYVAVANSGRDELIFIDALDDEPVLAPVV IRPLAVPTLPGEPHPTLLASAGLHDGQNADGTGLPDLLVVVSPGSSRLQLVATWDLATHVVQPAGADPLDLGALAPGAQV LDMIAVPVLEPGATAGTWQVARGKARVLASIAGGRLAVVDFARQADGSIAPSGTPALQDLGFEALSLAESPDHDRLFAAT VDEVIPGSGVFGVGEIDTTGAVGSWTVRALDARVGTTLVAAAKVTERFVGVQDGDTFCVRQPGDPFCKAPNQDLRVYAFL DPAACGRTARMPCGLAVIDPARGGLMADPTGEMPYLAPMAVPSIPIAIAISGPPALPPTNEPSDVQLSAANGYMLLAPGS GQVKTTGVAVLASGDGRVYMVDLARWHIPLNASILRTSTRTSVTGGTVFSPSLVVPDPENPGKYLVKPSRLRLGLWDLTA WPTVTRPTAALASTSANMPRTVRVTPGYTATDTWTVLYQGPLPGLSARAGQTGATADGRLWLAVQTPLPRSDGSTQLVDV ARLFDPSLAVHVGDIAQLAPASTVTACLTTDPDTETPSTTSYETRITAILPPSAAYPGGAVTLDETQLIDLRNPVAAERL PATPECIAALKQVAPAGNMLVTIRAAGLIAGGASMGYVGRPQLESDPTAADPFHLTYSALAPPPLGEDAISCPILPWPAE AYGPNAPAAFTACVDEACRSECERLVLARKARRLYYLSDRCLDIVDGPKASATKGCWVDWAAIADTLPDASGPIVSFHLG CGQAQVDANGDVVIDPRTKTVVEDVCTTELERDMSLTFITQSGIAYAYRGPTTGSNAASSFPVAAVPFDRSPFPGKQADG YRFFVTYSENFLLDMSPATAYSTSKVIR >Mature_907_residues TARNALLLLALAASAGCGSSAAKPDLGLVSPGGVAVFRGLTTKNALDPAHPYVAVANSGRDELIFIDALDDEPVLAPVVI RPLAVPTLPGEPHPTLLASAGLHDGQNADGTGLPDLLVVVSPGSSRLQLVATWDLATHVVQPAGADPLDLGALAPGAQVL DMIAVPVLEPGATAGTWQVARGKARVLASIAGGRLAVVDFARQADGSIAPSGTPALQDLGFEALSLAESPDHDRLFAATV DEVIPGSGVFGVGEIDTTGAVGSWTVRALDARVGTTLVAAAKVTERFVGVQDGDTFCVRQPGDPFCKAPNQDLRVYAFLD PAACGRTARMPCGLAVIDPARGGLMADPTGEMPYLAPMAVPSIPIAIAISGPPALPPTNEPSDVQLSAANGYMLLAPGSG QVKTTGVAVLASGDGRVYMVDLARWHIPLNASILRTSTRTSVTGGTVFSPSLVVPDPENPGKYLVKPSRLRLGLWDLTAW PTVTRPTAALASTSANMPRTVRVTPGYTATDTWTVLYQGPLPGLSARAGQTGATADGRLWLAVQTPLPRSDGSTQLVDVA RLFDPSLAVHVGDIAQLAPASTVTACLTTDPDTETPSTTSYETRITAILPPSAAYPGGAVTLDETQLIDLRNPVAAERLP ATPECIAALKQVAPAGNMLVTIRAAGLIAGGASMGYVGRPQLESDPTAADPFHLTYSALAPPPLGEDAISCPILPWPAEA YGPNAPAAFTACVDEACRSECERLVLARKARRLYYLSDRCLDIVDGPKASATKGCWVDWAAIADTLPDASGPIVSFHLGC GQAQVDANGDVVIDPRTKTVVEDVCTTELERDMSLTFITQSGIAYAYRGPTTGSNAASSFPVAAVPFDRSPFPGKQADGY RFFVTYSENFLLDMSPATAYSTSKVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94052; Mature: 93920
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARNALLLLALAASAGCGSSAAKPDLGLVSPGGVAVFRGLTTKNALDPAHPYVAVANSG CCCCCEEEEEEEHHCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCEEEEECCC RDELIFIDALDDEPVLAPVVIRPLAVPTLPGEPHPTLLASAGLHDGQNADGTGLPDLLVV CCCEEEEEECCCCCCEEHEEECCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEE VSPGSSRLQLVATWDLATHVVQPAGADPLDLGALAPGAQVLDMIAVPVLEPGATAGTWQV ECCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEE ARGKARVLASIAGGRLAVVDFARQADGSIAPSGTPALQDLGFEALSLAESPDHDRLFAAT CCCCEEEEEECCCCEEEEEEEHHHCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCEEEEEE VDEVIPGSGVFGVGEIDTTGAVGSWTVRALDARVGTTLVAAAKVTERFVGVQDGDTFCVR HHHHCCCCCEEECCCCCCCCCCCCEEEEEEHHHHCHHHHHHHHHHHHHCCCCCCCEEEEE QPGDPFCKAPNQDLRVYAFLDPAACGRTARMPCGLAVIDPARGGLMADPTGEMPYLAPMA CCCCCCCCCCCCCCEEEEEECHHHCCCCCCCCCCEEEECCCCCCEEECCCCCCCEECCCC VPSIPIAIAISGPPALPPTNEPSDVQLSAANGYMLLAPGSGQVKTTGVAVLASGDGRVYM CCCCCEEEEECCCCCCCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEEEEECCCCCEEE VDLARWHIPLNASILRTSTRTSVTGGTVFSPSLVVPDPENPGKYLVKPSRLRLGLWDLTA EEEEEEECCCCCEEEECCCCCEECCCEEECCEEECCCCCCCCCEEEECCCEEEEEEECCC WPTVTRPTAALASTSANMPRTVRVTPGYTATDTWTVLYQGPLPGLSARAGQTGATADGRL CCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEE WLAVQTPLPRSDGSTQLVDVARLFDPSLAVHVGDIAQLAPASTVTACLTTDPDTETPSTT EEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHCCCCEEEEEEECCCCCCCCCCC SYETRITAILPPSAAYPGGAVTLDETQLIDLRNPVAAERLPATPECIAALKQVAPAGNML CEEEEEEEEECCCCCCCCCEEEECCEEEEECCCCCHHHHCCCCHHHHHHHHHHCCCCCEE VTIRAAGLIAGGASMGYVGRPQLESDPTAADPFHLTYSALAPPPLGEDAISCPILPWPAE EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHH AYGPNAPAAFTACVDEACRSECERLVLARKARRLYYLSDRCLDIVDGPKASATKGCWVDW HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCCCCCCCEEEH AAIADTLPDASGPIVSFHLGCGQAQVDANGDVVIDPRTKTVVEDVCTTELERDMSLTFIT HHHHHHCCCCCCCEEEEEECCCCEEECCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEEE QSGIAYAYRGPTTGSNAASSFPVAAVPFDRSPFPGKQADGYRFFVTYSENFLLDMSPATA ECCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCC YSTSKVIR CCHHHHCC >Mature Secondary Structure TARNALLLLALAASAGCGSSAAKPDLGLVSPGGVAVFRGLTTKNALDPAHPYVAVANSG CCCCEEEEEEEHHCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCEEEEECCC RDELIFIDALDDEPVLAPVVIRPLAVPTLPGEPHPTLLASAGLHDGQNADGTGLPDLLVV CCCEEEEEECCCCCCEEHEEECCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEE VSPGSSRLQLVATWDLATHVVQPAGADPLDLGALAPGAQVLDMIAVPVLEPGATAGTWQV ECCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEE ARGKARVLASIAGGRLAVVDFARQADGSIAPSGTPALQDLGFEALSLAESPDHDRLFAAT CCCCEEEEEECCCCEEEEEEEHHHCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCEEEEEE VDEVIPGSGVFGVGEIDTTGAVGSWTVRALDARVGTTLVAAAKVTERFVGVQDGDTFCVR HHHHCCCCCEEECCCCCCCCCCCCEEEEEEHHHHCHHHHHHHHHHHHHCCCCCCCEEEEE QPGDPFCKAPNQDLRVYAFLDPAACGRTARMPCGLAVIDPARGGLMADPTGEMPYLAPMA CCCCCCCCCCCCCCEEEEEECHHHCCCCCCCCCCEEEECCCCCCEEECCCCCCCEECCCC VPSIPIAIAISGPPALPPTNEPSDVQLSAANGYMLLAPGSGQVKTTGVAVLASGDGRVYM CCCCCEEEEECCCCCCCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEEEEECCCCCEEE VDLARWHIPLNASILRTSTRTSVTGGTVFSPSLVVPDPENPGKYLVKPSRLRLGLWDLTA EEEEEEECCCCCEEEECCCCCEECCCEEECCEEECCCCCCCCCEEEECCCEEEEEEECCC WPTVTRPTAALASTSANMPRTVRVTPGYTATDTWTVLYQGPLPGLSARAGQTGATADGRL CCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEE WLAVQTPLPRSDGSTQLVDVARLFDPSLAVHVGDIAQLAPASTVTACLTTDPDTETPSTT EEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHCCCCEEEEEEECCCCCCCCCCC SYETRITAILPPSAAYPGGAVTLDETQLIDLRNPVAAERLPATPECIAALKQVAPAGNML CEEEEEEEEECCCCCCCCCEEEECCEEEEECCCCCHHHHCCCCHHHHHHHHHHCCCCCEE VTIRAAGLIAGGASMGYVGRPQLESDPTAADPFHLTYSALAPPPLGEDAISCPILPWPAE EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHH AYGPNAPAAFTACVDEACRSECERLVLARKARRLYYLSDRCLDIVDGPKASATKGCWVDW HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCCCCCCCEEEH AAIADTLPDASGPIVSFHLGCGQAQVDANGDVVIDPRTKTVVEDVCTTELERDMSLTFIT HHHHHHCCCCCCCEEEEEECCCCEEECCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEEE QSGIAYAYRGPTTGSNAASSFPVAAVPFDRSPFPGKQADGYRFFVTYSENFLLDMSPATA ECCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCC YSTSKVIR CCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA