Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is ptpA [H]
Identifier: 220917718
GI number: 220917718
Start: 2894092
End: 2896299
Strand: Reverse
Name: ptpA [H]
Synonym: A2cp1_2619
Alternate gene names: 220917718
Gene position: 2896299-2894092 (Counterclockwise)
Preceding gene: 220917719
Following gene: 220917717
Centisome position: 57.59
GC content: 79.03
Gene sequence:
>2208_bases ATGCCCGCGCTCCTGTGCCCGTTCCTCCTGGCCGCGGCCGTGGCCGCCGACGCCGCGCCCACGCCGCCGCCCTCGGATCC GTTCCTGCGCCAGTACGCCGAGACGCGCGGCTTCCGCGCCGGGCGGCCCACCGGCGTCCAGCTCTCGCCGGACGGGCGCA CGGCCCTGTTCCTGCGCTCCGGGCCGCGGTCGCGCGCGCAGGCGCTCCTCGAGACCGACCTCGCCACCGGGGTGACGCGC ACCGTCGTCGAGGCGGACGGGGCCGGGGCGCTCTCGCCCGAGGAGGCGGCGCGCCTGGAGCGGCAGCGCATCACCGCGCG CGGCATCACGCACTTCGTGCTCTCGCCGGACGGGGCGCGGGTGGTGTACGGGCTGGGCGGGCGCCTGTGGCTGCTCGACC GCTCCGCCGGCCGCGCGGCCCCGCTGCCGGGCTCCGAGGGCGCGCTCGACCCGCGCTTCTCGCCGGACGGCCGCGCGCTC GCGTACGTGAAGCGCGGGGACCTGTACGTGCGCGCGGTGCCGCGCGGACCCGAGCGGCGGCTCACGCGCGCCCGCGGGCC GCAGGTGACGAACGGCCTCGCCGAGTTCGTGGCGCAGGAGGAGATGGACCGCGACGAGGGCTTCTGGTGGTCGCCCGACG CGCGGCGGATCGCCTACGCGGAGGTGGACGAGTCGGCGGTGGAGCGGCGCATGCTCTGCGACCCGGCGCGCCCGGCGCGG CCGTGCGAGGCGCGTGCCTACCCGCGGGCCGGCACGCCCAACGCCGCCGTGCGCCTGAAGGTGGTGCCCGCCGCGGGCGG TCCGGCCGTGGAGATGCGCTGGGACGCGGGGCGCTACCCGTACCTGGCCGCGGTGCGCTGGTCGAAGGGCGGGCCGCTCG CGCTGCTGGTGCAGGACCGGCTCCAGCGCGAGGAGCGGCTGCTCGCGGCCGATCCCGCCACCGGCGCGACCCGCGCGCTG CTCGCCGAGCGCGACGACGCCTGGCTGAACCTGTGGCCGGGCATGCCGGCGTTCCTCCCCGACGGCCGCTTCTGGTGGGT GACCGAGCGCGGCGGCGCGCCGGAGGTGGAGCTGCGCGCCCCCGACGGCGCGCGGCTCGGGCTGGCGGTCCCGCGCGAGC TCGGGTACGCGGCGTTCGCGGGGGTGGACGGCGACGCGCTGGTGTTCGCGGGCGCGCCGGATCCCACGCGCGAGGAGCTG TACCGGGTGCGGCCCGGCTCGGCGCCCGAACGGCTCGCGCTCGGCGAGCCGGGGCCGGCGACGCGCAAGGCGGTGCTGGC GCCGTGCGGCGGCAACGTGGCGGTCACCTGGAGCACGCTGCGCCGGTTGCCGGTCACCGCCGTGTTCGCCGCGGACGGCG CGCGGCTGGCGGTGCTGCCGAGCGTCGCGGAGGAGCCGGCGTTCGTGCCCACCACCGAGCTGCGGCAGCTCGGCGGGGCG GACGGGATCCGGGCGGCGGTGCTGCGGCCGCGCGCGCTCGGCGCCGGGGCGCGGCTGCCGGTGGTGGTGGACGTGTACGG CGGCCCGGTGCCTGCGTACTACGTGCCGCAGGTCGCGCACCGGCCCATGCTGATCGAGCAGTGGCTGGCCGACCAGGGCT TCCTGGTGGCCGTCTTCGAGGGGCGGGGCACGCCGCGCCGCGGCCGCGCCTGGGAGCGCGCCATCGCGGGCGACCTCGGC ACGGTGCCGCTCGAGGACCAGGTGGCGGCCCTCGAGGCGCTCGGGCGCGAGGTCCCGGAGGCCGACGTGGCGCGCGCCGG GATCACCGGCTGGTCGTTCGGCGGCTACCTCGCGGCGCTCGCGGTGATGCGCCGGCCGGATCGCTTCCAGGCGGCGGTCG CGGGCGCGCCGGTCGCGGACTGGGAGCAGTACGACACGTACTACACCGAGCGCTACCTGGGCCTGCCCGGCGATCGCGCC GAGGCGTACGCCCGGAGCGGGCTGCTGGCCTGGGCGCCGCGCCTGCAGCGGCCGCTGCTCCTGCTGCACGGGACGGCCGA CGACAACGTGTTCCTGTCGCACTCGCTCGCGCTGGCCGACGCGCTGTTCCGCGCCGGGCGCCCGTTCGAGCTCGTCCCGA TCGCCGGCGCGACGCACGCGGTGCCGGAGCCGCTCGCGGCGGAGCGGCGCTGGGAGTGGACCGCAGGATTCTTCCGCCGG ACGCTGGGCGCGGTGCGACCCGGCCCCGCCCTCGCGCCCGCGCCCTGA
Upstream 100 bases:
>100_bases ACCTCCTCTGCACCCGCCATCGGCTCGGGCCCGCCCCGCGGCGCAGGGCGGGCGGACGGTCCGCGGCGCCGCGCCGGCGC GGGTGATACAAACGGGGCCG
Downstream 100 bases:
>100_bases TCCGGGGATTCCGCCGGCGCGCGAGACCCCGGCCCCGGCGGGGGAGGGTCGCCGGCCGCCCTGGCTCGGGCGCGGACGGT CGGTGAATGCGCCCGCCGCT
Product: peptidase S9 prolyl oligopeptidase active site domain-containing protein
Products: NA
Alternate protein names: PTP; Prolyl tripeptidyl peptidase A [H]
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MPALLCPFLLAAAVAADAAPTPPPSDPFLRQYAETRGFRAGRPTGVQLSPDGRTALFLRSGPRSRAQALLETDLATGVTR TVVEADGAGALSPEEAARLERQRITARGITHFVLSPDGARVVYGLGGRLWLLDRSAGRAAPLPGSEGALDPRFSPDGRAL AYVKRGDLYVRAVPRGPERRLTRARGPQVTNGLAEFVAQEEMDRDEGFWWSPDARRIAYAEVDESAVERRMLCDPARPAR PCEARAYPRAGTPNAAVRLKVVPAAGGPAVEMRWDAGRYPYLAAVRWSKGGPLALLVQDRLQREERLLAADPATGATRAL LAERDDAWLNLWPGMPAFLPDGRFWWVTERGGAPEVELRAPDGARLGLAVPRELGYAAFAGVDGDALVFAGAPDPTREEL YRVRPGSAPERLALGEPGPATRKAVLAPCGGNVAVTWSTLRRLPVTAVFAADGARLAVLPSVAEEPAFVPTTELRQLGGA DGIRAAVLRPRALGAGARLPVVVDVYGGPVPAYYVPQVAHRPMLIEQWLADQGFLVAVFEGRGTPRRGRAWERAIAGDLG TVPLEDQVAALEALGREVPEADVARAGITGWSFGGYLAALAVMRRPDRFQAAVAGAPVADWEQYDTYYTERYLGLPGDRA EAYARSGLLAWAPRLQRPLLLLHGTADDNVFLSHSLALADALFRAGRPFELVPIAGATHAVPEPLAAERRWEWTAGFFRR TLGAVRPGPALAPAP
Sequences:
>Translated_735_residues MPALLCPFLLAAAVAADAAPTPPPSDPFLRQYAETRGFRAGRPTGVQLSPDGRTALFLRSGPRSRAQALLETDLATGVTR TVVEADGAGALSPEEAARLERQRITARGITHFVLSPDGARVVYGLGGRLWLLDRSAGRAAPLPGSEGALDPRFSPDGRAL AYVKRGDLYVRAVPRGPERRLTRARGPQVTNGLAEFVAQEEMDRDEGFWWSPDARRIAYAEVDESAVERRMLCDPARPAR PCEARAYPRAGTPNAAVRLKVVPAAGGPAVEMRWDAGRYPYLAAVRWSKGGPLALLVQDRLQREERLLAADPATGATRAL LAERDDAWLNLWPGMPAFLPDGRFWWVTERGGAPEVELRAPDGARLGLAVPRELGYAAFAGVDGDALVFAGAPDPTREEL YRVRPGSAPERLALGEPGPATRKAVLAPCGGNVAVTWSTLRRLPVTAVFAADGARLAVLPSVAEEPAFVPTTELRQLGGA DGIRAAVLRPRALGAGARLPVVVDVYGGPVPAYYVPQVAHRPMLIEQWLADQGFLVAVFEGRGTPRRGRAWERAIAGDLG TVPLEDQVAALEALGREVPEADVARAGITGWSFGGYLAALAVMRRPDRFQAAVAGAPVADWEQYDTYYTERYLGLPGDRA EAYARSGLLAWAPRLQRPLLLLHGTADDNVFLSHSLALADALFRAGRPFELVPIAGATHAVPEPLAAERRWEWTAGFFRR TLGAVRPGPALAPAP >Mature_734_residues PALLCPFLLAAAVAADAAPTPPPSDPFLRQYAETRGFRAGRPTGVQLSPDGRTALFLRSGPRSRAQALLETDLATGVTRT VVEADGAGALSPEEAARLERQRITARGITHFVLSPDGARVVYGLGGRLWLLDRSAGRAAPLPGSEGALDPRFSPDGRALA YVKRGDLYVRAVPRGPERRLTRARGPQVTNGLAEFVAQEEMDRDEGFWWSPDARRIAYAEVDESAVERRMLCDPARPARP CEARAYPRAGTPNAAVRLKVVPAAGGPAVEMRWDAGRYPYLAAVRWSKGGPLALLVQDRLQREERLLAADPATGATRALL AERDDAWLNLWPGMPAFLPDGRFWWVTERGGAPEVELRAPDGARLGLAVPRELGYAAFAGVDGDALVFAGAPDPTREELY RVRPGSAPERLALGEPGPATRKAVLAPCGGNVAVTWSTLRRLPVTAVFAADGARLAVLPSVAEEPAFVPTTELRQLGGAD GIRAAVLRPRALGAGARLPVVVDVYGGPVPAYYVPQVAHRPMLIEQWLADQGFLVAVFEGRGTPRRGRAWERAIAGDLGT VPLEDQVAALEALGREVPEADVARAGITGWSFGGYLAALAVMRRPDRFQAAVAGAPVADWEQYDTYYTERYLGLPGDRAE AYARSGLLAWAPRLQRPLLLLHGTADDNVFLSHSLALADALFRAGRPFELVPIAGATHAVPEPLAAERRWEWTAGFFRRT LGAVRPGPALAPAP
Specific function: Serine proteinase. Releases tripeptides from the free amino terminus of proteins. Has a requirement for Pro in the P1 position, but is inactivated by Pro in the P1' position [H]
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI18450280, Length=682, Percent_Identity=26.2463343108504, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI37577089, Length=682, Percent_Identity=26.2463343108504, Blast_Score=200, Evalue=5e-51, Organism=Homo sapiens, GI194394146, Length=737, Percent_Identity=26.0515603799186, Blast_Score=200, Evalue=5e-51, Organism=Homo sapiens, GI18765694, Length=621, Percent_Identity=23.9935587761675, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI16933540, Length=691, Percent_Identity=24.4573082489146, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI85787627, Length=611, Percent_Identity=23.4042553191489, Blast_Score=141, Evalue=3e-33, Organism=Homo sapiens, GI295842359, Length=611, Percent_Identity=23.4042553191489, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI295842403, Length=611, Percent_Identity=23.4042553191489, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI295849272, Length=611, Percent_Identity=23.4042553191489, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI52426756, Length=616, Percent_Identity=23.3766233766234, Blast_Score=140, Evalue=5e-33, Organism=Homo sapiens, GI37577091, Length=752, Percent_Identity=22.6063829787234, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI86792774, Length=607, Percent_Identity=21.7462932454695, Blast_Score=127, Evalue=5e-29, Organism=Homo sapiens, GI86792778, Length=607, Percent_Identity=21.7462932454695, Blast_Score=126, Evalue=6e-29, Organism=Homo sapiens, GI86792863, Length=607, Percent_Identity=21.7462932454695, Blast_Score=126, Evalue=8e-29, Organism=Homo sapiens, GI18450278, Length=312, Percent_Identity=24.6794871794872, Blast_Score=76, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17508017, Length=222, Percent_Identity=36.036036036036, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17508019, Length=222, Percent_Identity=36.036036036036, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17550672, Length=616, Percent_Identity=24.8376623376623, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17564634, Length=649, Percent_Identity=23.5747303543914, Blast_Score=122, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17564632, Length=598, Percent_Identity=24.247491638796, Blast_Score=120, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6324793, Length=243, Percent_Identity=27.1604938271605, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6321817, Length=242, Percent_Identity=31.404958677686, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI45551969, Length=753, Percent_Identity=27.0916334661355, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI45550825, Length=753, Percent_Identity=26.8260292164675, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI45553511, Length=753, Percent_Identity=26.8260292164675, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI17933704, Length=615, Percent_Identity=26.0162601626016, Blast_Score=155, Evalue=9e-38, Organism=Drosophila melanogaster, GI161083744, Length=612, Percent_Identity=25.9803921568627, Blast_Score=155, Evalue=1e-37, Organism=Drosophila melanogaster, GI221331178, Length=612, Percent_Identity=25.9803921568627, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24582032, Length=656, Percent_Identity=24.5426829268293, Blast_Score=142, Evalue=8e-34, Organism=Drosophila melanogaster, GI24582257, Length=201, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=4e-26, Organism=Drosophila melanogaster, GI45551475, Length=202, Percent_Identity=32.1782178217822, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI221372266, Length=202, Percent_Identity=32.1782178217822, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI221372263, Length=202, Percent_Identity=32.1782178217822, Blast_Score=99, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001375 - InterPro: IPR002469 [H]
Pfam domain/function: PF00930 DPPIV_N; PF00326 Peptidase_S9 [H]
EC number: =3.4.14.12 [H]
Molecular weight: Translated: 78913; Mature: 78781
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALLCPFLLAAAVAADAAPTPPPSDPFLRQYAETRGFRAGRPTGVQLSPDGRTALFLRS CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEC GPRSRAQALLETDLATGVTRTVVEADGAGALSPEEAARLERQRITARGITHFVLSPDGAR CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCE VVYGLGGRLWLLDRSAGRAAPLPGSEGALDPRFSPDGRALAYVKRGDLYVRAVPRGPERR EEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCHHHH LTRARGPQVTNGLAEFVAQEEMDRDEGFWWSPDARRIAYAEVDESAVERRMLCDPARPAR HHHHCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEECCCHHHHHHHHHCCCCCCCC PCEARAYPRAGTPNAAVRLKVVPAAGGPAVEMRWDAGRYPYLAAVRWSKGGPLALLVQDR CCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEHHH LQREERLLAADPATGATRALLAERDDAWLNLWPGMPAFLPDGRFWWVTERGGAPEVELRA HHHHHHEEECCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEC PDGARLGLAVPRELGYAAFAGVDGDALVFAGAPDPTREELYRVRPGSAPERLALGEPGPA CCCCEEEEECHHHCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCCCCCCCEECCCCCCC TRKAVLAPCGGNVAVTWSTLRRLPVTAVFAADGARLAVLPSVAEEPAFVPTTELRQLGGA CCEEEEEECCCCEEEEHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHCCCC DGIRAAVLRPRALGAGARLPVVVDVYGGPVPAYYVPQVAHRPMLIEQWLADQGFLVAVFE CCCHHHHCCCHHCCCCCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHCCCCEEEEEEE GRGTPRRGRAWERAIAGDLGTVPLEDQVAALEALGREVPEADVARAGITGWSFGGYLAAL CCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHH AVMRRPDRFQAAVAGAPVADWEQYDTYYTERYLGLPGDRAEAYARSGLLAWAPRLQRPLL HHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCHHHCCCEE LLHGTADDNVFLSHSLALADALFRAGRPFELVPIAGATHAVPEPLAAERRWEWTAGFFRR EEECCCCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHH TLGAVRPGPALAPAP HHHCCCCCCCCCCCC >Mature Secondary Structure PALLCPFLLAAAVAADAAPTPPPSDPFLRQYAETRGFRAGRPTGVQLSPDGRTALFLRS CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEC GPRSRAQALLETDLATGVTRTVVEADGAGALSPEEAARLERQRITARGITHFVLSPDGAR CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCE VVYGLGGRLWLLDRSAGRAAPLPGSEGALDPRFSPDGRALAYVKRGDLYVRAVPRGPERR EEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCHHHH LTRARGPQVTNGLAEFVAQEEMDRDEGFWWSPDARRIAYAEVDESAVERRMLCDPARPAR HHHHCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEECCCHHHHHHHHHCCCCCCCC PCEARAYPRAGTPNAAVRLKVVPAAGGPAVEMRWDAGRYPYLAAVRWSKGGPLALLVQDR CCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEHHH LQREERLLAADPATGATRALLAERDDAWLNLWPGMPAFLPDGRFWWVTERGGAPEVELRA HHHHHHEEECCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEC PDGARLGLAVPRELGYAAFAGVDGDALVFAGAPDPTREELYRVRPGSAPERLALGEPGPA CCCCEEEEECHHHCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCCCCCCCEECCCCCCC TRKAVLAPCGGNVAVTWSTLRRLPVTAVFAADGARLAVLPSVAEEPAFVPTTELRQLGGA CCEEEEEECCCCEEEEHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHCCCC DGIRAAVLRPRALGAGARLPVVVDVYGGPVPAYYVPQVAHRPMLIEQWLADQGFLVAVFE CCCHHHHCCCHHCCCCCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHCCCCEEEEEEE GRGTPRRGRAWERAIAGDLGTVPLEDQVAALEALGREVPEADVARAGITGWSFGGYLAAL CCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHH AVMRRPDRFQAAVAGAPVADWEQYDTYYTERYLGLPGDRAEAYARSGLLAWAPRLQRPLL HHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCHHHCCCEE LLHGTADDNVFLSHSLALADALFRAGRPFELVPIAGATHAVPEPLAAERRWEWTAGFFRR EEECCCCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHH TLGAVRPGPALAPAP HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA