Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917716
Identifier: 220917716
GI number: 220917716
Start: 2891736
End: 2893070
Strand: Reverse
Name: 220917716
Synonym: A2cp1_2617
Alternate gene names: NA
Gene position: 2893070-2891736 (Counterclockwise)
Preceding gene: 220917717
Following gene: 220917699
Centisome position: 57.52
GC content: 81.2
Gene sequence:
>1335_bases ATGGCCCATGTGTCGCTCTGCCTCATCGCGAAGGACGAGGAGCGGATGCTCCCCGGGTGCCTGGAGTCGGTCCGGGGGGT CGTCGACGAGATCGTGCTGGTCGACACCGGCTCCACCGACCGGACCCGCGAGCTGGCGCGCGCGGCCGGCGCCAGGGTGC TGGAGCGCCCGTGGGACGACGACTTCGCGGCGCCGCGAAACCTCGCCGCGGCGCACGCCACCGGCGACTGGATCCTCCCG CTCGACGCGGACGAGCGGCTCGCGCCGGGCGCGGGGGTGGCCCTGCGGCGCGCGCTGCGGCGCGCCACGTTCGACGTGGG CCTGGTCCGGTGTCACAACGCGGACGCGCCCGACGCGCCGGCGGGCGAGGTCCTCTCCGGCGTGCGGCGCGCCGGGCCGC CGGCCCTGCTGCCGCGGGTGGTGCGGCGCGCGCCCGGGCTGCGCTGGACCGGGCGGATCCACGAGAGCGTGCTGGAGTGG GCCGCGGCGCGGGGCGGGCGCATCGCCGCGCTGGAGGTGGACCTCGTGCACCTCGGCTACTCGAAGGAGATCTGGGACGG GCGGGGCAAGCGCGCGCGCAACCTGGCGCTGCTGCGCCGGCGCGCCGAGGACGAGCCCGACAGCGTCATCGCGCTCGGCT ACCTCGCGGCGGAGCTGCTCGCGCTCGGGGAGGCCGAGGAGGCCGGGGAGATCGCGGAGCGTGCCTGGGCCGCGCTGGAC CGCCAGCCCCGCCACCGCTCGATCCGGCGCCTCGCGGTGGTCCGGGCGGCGCTCGCGGTCCGCCGCGGCGACGCCGCGGT CGCCCTCGAGGCGGTCGACCGGGCGGAGGCCGCCGGCGGCGCGAACCCGGACCTGCCGTTCTTCCGGGCCTGCGCCCTGG AGATCTCCGCCGGCGCCCCGGGCGCGCCCGGGCGCGAGGAGCGGCTGGCGCGGGCCGCTGCCGAGCTGCGCCGCGCGCTC GCGCTGCTGGAGGGCGGGGTGTTCGACCAGGTGATCTACGCGCGGCGGGCGCGGGCGCTGGCGCGCCTCGGCGCGGTCGA GCTGCGGGCCGGCCGGGCGGAGGCGGCGCGCGCGGCGTACCGCGCGGCGCGCACCCCGGCGCATCCGGCGGACGCGCTCG CGCCGGCCGAGGGGATCGAGGCGGCGGCCGGGGAGGCCGAGGCGCTGGTGGCGCTGGGCCGGGCCGGGGAGGCGCTCGCC GCGCTCGAGCCGGTGCTGGCCGCGGGCGGCCCACCGCGCGCCTGGGCCGCCGCGGCCCGGGCCGCGCACGCGCTCGGCGC GCTCGAGGACGCGCGGCTGTTCCTGGCGCGCGCGCGGGCGGCGGCCGCGGGCTGA
Upstream 100 bases:
>100_bases CGCGCCGACGCGCCGGGCGCGCCAGCGGCGTGACGCGGGCGCAACCCCGCGCCGCGACGGGCGCGGCGGCGGCGGCACCG CCCTTGCTCTGCTGCGAGGG
Downstream 100 bases:
>100_bases TCAGCGCCCGCCGGCCGCGAGCCGCGCGGCGGCGGCCTCGAACGCCTCGGCGATGGGGGCGAGGGCCCGCTCCGCCTCGC GCGCCGCGCGCGCGTCGCGG
Product: family 2 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MAHVSLCLIAKDEERMLPGCLESVRGVVDEIVLVDTGSTDRTRELARAAGARVLERPWDDDFAAPRNLAAAHATGDWILP LDADERLAPGAGVALRRALRRATFDVGLVRCHNADAPDAPAGEVLSGVRRAGPPALLPRVVRRAPGLRWTGRIHESVLEW AAARGGRIAALEVDLVHLGYSKEIWDGRGKRARNLALLRRRAEDEPDSVIALGYLAAELLALGEAEEAGEIAERAWAALD RQPRHRSIRRLAVVRAALAVRRGDAAVALEAVDRAEAAGGANPDLPFFRACALEISAGAPGAPGREERLARAAAELRRAL ALLEGGVFDQVIYARRARALARLGAVELRAGRAEAARAAYRAARTPAHPADALAPAEGIEAAAGEAEALVALGRAGEALA ALEPVLAAGGPPRAWAAAARAAHALGALEDARLFLARARAAAAG
Sequences:
>Translated_444_residues MAHVSLCLIAKDEERMLPGCLESVRGVVDEIVLVDTGSTDRTRELARAAGARVLERPWDDDFAAPRNLAAAHATGDWILP LDADERLAPGAGVALRRALRRATFDVGLVRCHNADAPDAPAGEVLSGVRRAGPPALLPRVVRRAPGLRWTGRIHESVLEW AAARGGRIAALEVDLVHLGYSKEIWDGRGKRARNLALLRRRAEDEPDSVIALGYLAAELLALGEAEEAGEIAERAWAALD RQPRHRSIRRLAVVRAALAVRRGDAAVALEAVDRAEAAGGANPDLPFFRACALEISAGAPGAPGREERLARAAAELRRAL ALLEGGVFDQVIYARRARALARLGAVELRAGRAEAARAAYRAARTPAHPADALAPAEGIEAAAGEAEALVALGRAGEALA ALEPVLAAGGPPRAWAAAARAAHALGALEDARLFLARARAAAAG >Mature_443_residues AHVSLCLIAKDEERMLPGCLESVRGVVDEIVLVDTGSTDRTRELARAAGARVLERPWDDDFAAPRNLAAAHATGDWILPL DADERLAPGAGVALRRALRRATFDVGLVRCHNADAPDAPAGEVLSGVRRAGPPALLPRVVRRAPGLRWTGRIHESVLEWA AARGGRIAALEVDLVHLGYSKEIWDGRGKRARNLALLRRRAEDEPDSVIALGYLAAELLALGEAEEAGEIAERAWAALDR QPRHRSIRRLAVVRAALAVRRGDAAVALEAVDRAEAAGGANPDLPFFRACALEISAGAPGAPGREERLARAAAELRRALA LLEGGVFDQVIYARRARALARLGAVELRAGRAEAARAAYRAARTPAHPADALAPAEGIEAAAGEAEALVALGRAGEALAA LEPVLAAGGPPRAWAAAARAAHALGALEDARLFLARARAAAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00535 Glycos_transf_2; PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 46664; Mature: 46532
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHVSLCLIAKDEERMLPGCLESVRGVVDEIVLVDTGSTDRTRELARAAGARVLERPWDD CCCEEEEEEECCHHHCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCC DFAAPRNLAAAHATGDWILPLDADERLAPGAGVALRRALRRATFDVGLVRCHNADAPDAP CCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCC AGEVLSGVRRAGPPALLPRVVRRAPGLRWTGRIHESVLEWAAARGGRIAALEVDLVHLGY HHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCC SKEIWDGRGKRARNLALLRRRAEDEPDSVIALGYLAAELLALGEAEEAGEIAERAWAALD CHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC RQPRHRSIRRLAVVRAALAVRRGDAAVALEAVDRAEAAGGANPDLPFFRACALEISAGAP CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCC GAPGREERLARAAAELRRALALLEGGVFDQVIYARRARALARLGAVELRAGRAEAARAAY CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RAARTPAHPADALAPAEGIEAAAGEAEALVALGRAGEALAALEPVLAAGGPPRAWAAAAR HHHCCCCCCHHHCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH AAHALGALEDARLFLARARAAAAG HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AHVSLCLIAKDEERMLPGCLESVRGVVDEIVLVDTGSTDRTRELARAAGARVLERPWDD CCEEEEEEECCHHHCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCC DFAAPRNLAAAHATGDWILPLDADERLAPGAGVALRRALRRATFDVGLVRCHNADAPDAP CCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCC AGEVLSGVRRAGPPALLPRVVRRAPGLRWTGRIHESVLEWAAARGGRIAALEVDLVHLGY HHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCC SKEIWDGRGKRARNLALLRRRAEDEPDSVIALGYLAAELLALGEAEEAGEIAERAWAALD CHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC RQPRHRSIRRLAVVRAALAVRRGDAAVALEAVDRAEAAGGANPDLPFFRACALEISAGAP CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCC GAPGREERLARAAAELRRALALLEGGVFDQVIYARRARALARLGAVELRAGRAEAARAAY CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RAARTPAHPADALAPAEGIEAAAGEAEALVALGRAGEALAALEPVLAAGGPPRAWAAAAR HHHCCCCCCHHHCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH AAHALGALEDARLFLARARAAAAG HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8123787 [H]