Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917650
Identifier: 220917650
GI number: 220917650
Start: 2828087
End: 2828695
Strand: Reverse
Name: 220917650
Synonym: A2cp1_2551
Alternate gene names: NA
Gene position: 2828695-2828087 (Counterclockwise)
Preceding gene: 220917652
Following gene: 220917649
Centisome position: 56.24
GC content: 72.09
Gene sequence:
>609_bases ATGGATGCGATCGAGACGTTGATGGGCGAGCACCGGGTGATCGAGCAGGTGTGCGACGCCCTGGTGGGCTTCGCCGAGGA GCTCCGCCGCAAGGGGGCCACCGAGAAGGAGGAGCTGGGGCGCTTCGTCACGTTCCTGCGCGAGTTCGCCGACGGCTGCC ACCACGGCAAGGAGGAGGACATCCTCTTCCAGACCATGACCCAGCACGGGTTCCCGTCGAACGGCGGGCCCATCGCGGTG ATGCTCCACGAGCACGACCAGGGGCGCGCGCTGATCCGCGCCATGGCGGAGAAGGCCGCGCAGGACGCGCCCTGGAGCGC CGCCGACCTGCAGGAGGTCGAGGCGGCCGCGCACGGCTACTCCGGCCTGCTCCACGCGCACATCCACAAGGAGGACGCGA TCCTCTACCCGATGGCCGAGCAGCACCTGCCGCCCGAGGTGATGGCGGAGGTGGGCGAGGCCTGCGACCGCTTCGAGGCG GAGCGCACCGGCGCGGGCGCGCACGAGCGGTACCACGCGCTGGCCGAGGAGCTGATCCGCCGTCACGCCGGCTCCATCCA CCCCGGCGCCCAGCCGTCCACCGCGCACCGCTTCGGCTGCGCCGGCTAA
Upstream 100 bases:
>100_bases AACCTGAGTGGTTACCGAAATGTCGAGTTCGGCAGGCATCTTGCTGATGGTCACGCGCGGGAGCAAAGCACCGGCGGTGC CGCCGGAAGGAGGCCGAACG
Downstream 100 bases:
>100_bases CCCACTTCACGCACCAGGAGAGACGTCCGACATGAGCCCGAAGGCCCGCGCAGTCTCGCTGTTCGTCATCGTCGCCTGCT TCACCGTCCTCATCTTCGGC
Product: Hemerythrin HHE cation binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MDAIETLMGEHRVIEQVCDALVGFAEELRRKGATEKEELGRFVTFLREFADGCHHGKEEDILFQTMTQHGFPSNGGPIAV MLHEHDQGRALIRAMAEKAAQDAPWSAADLQEVEAAAHGYSGLLHAHIHKEDAILYPMAEQHLPPEVMAEVGEACDRFEA ERTGAGAHERYHALAEELIRRHAGSIHPGAQPSTAHRFGCAG
Sequences:
>Translated_202_residues MDAIETLMGEHRVIEQVCDALVGFAEELRRKGATEKEELGRFVTFLREFADGCHHGKEEDILFQTMTQHGFPSNGGPIAV MLHEHDQGRALIRAMAEKAAQDAPWSAADLQEVEAAAHGYSGLLHAHIHKEDAILYPMAEQHLPPEVMAEVGEACDRFEA ERTGAGAHERYHALAEELIRRHAGSIHPGAQPSTAHRFGCAG >Mature_202_residues MDAIETLMGEHRVIEQVCDALVGFAEELRRKGATEKEELGRFVTFLREFADGCHHGKEEDILFQTMTQHGFPSNGGPIAV MLHEHDQGRALIRAMAEKAAQDAPWSAADLQEVEAAAHGYSGLLHAHIHKEDAILYPMAEQHLPPEVMAEVGEACDRFEA ERTGAGAHERYHALAEELIRRHAGSIHPGAQPSTAHRFGCAG
Specific function: Unknown
COG id: COG3945
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22187; Mature: 22187
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAIETLMGEHRVIEQVCDALVGFAEELRRKGATEKEELGRFVTFLREFADGCHHGKEED CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH ILFQTMTQHGFPSNGGPIAVMLHEHDQGRALIRAMAEKAAQDAPWSAADLQEVEAAAHGY HHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SGLLHAHIHKEDAILYPMAEQHLPPEVMAEVGEACDRFEAERTGAGAHERYHALAEELIR HHHHHHHHCCCCCEECCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RHAGSIHPGAQPSTAHRFGCAG HHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDAIETLMGEHRVIEQVCDALVGFAEELRRKGATEKEELGRFVTFLREFADGCHHGKEED CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH ILFQTMTQHGFPSNGGPIAVMLHEHDQGRALIRAMAEKAAQDAPWSAADLQEVEAAAHGY HHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SGLLHAHIHKEDAILYPMAEQHLPPEVMAEVGEACDRFEAERTGAGAHERYHALAEELIR HHHHHHHHCCCCCEECCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RHAGSIHPGAQPSTAHRFGCAG HHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA