Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is pgl [H]
Identifier: 220917607
GI number: 220917607
Start: 2769129
End: 2769860
Strand: Reverse
Name: pgl [H]
Synonym: A2cp1_2507
Alternate gene names: 220917607
Gene position: 2769860-2769129 (Counterclockwise)
Preceding gene: 220917608
Following gene: 220917606
Centisome position: 55.07
GC content: 80.87
Gene sequence:
>732_bases GTGGCGCGTCCCCCGGGGCCGGCGCTGGTGCGGGCCGCGGACGCGGCGGCCCTGGCGCGCGTGGCCGCCGAGGAGGTGGC GCGGCGGGCCGAGGAGGCCGTCGCGGCGCGCGGGCGCTTCGCGATCGCGCTCGCCGGAGGAAGCACCCCGCGGGCGCTGT ACGCGCTCCTCGCCGATCCCGCCGCGCCCTGGCGCGAGCGGGTGCCGTGGGCCCGCACCGAGATCTGGTTCGGCGACGAG CGCTGCGTCCCGCCCGACCACCCCGACTCGAACTATCGGACCGCGGGCGAGGCGCTGCTGGAGCACGTCCCCGCCGCCGC CGTGCATCGGATCGAGGGCGAGCGACCGCCCGCGGAGGCGGCCGCCGGCTACGAGGCGGCGCTGCGGCGGGCGGCCGATC CCGACGGGAGCCCGCCGCGCCTCGACCTGGTGCTGCTCGGCCTCGGGGCCGACGGCCACACCGCGTCGCTGTTCCCGGGG AGCCCCGCGCTCGACGAGCGCGCGCGCTGGGTGGCGGCGCCCTTCGTGCCCGCCGTCGGCGCCCACCGCATCACCCTCAC GCTGCCGGTGCTGGAGCGGGCGCGCGCGATCGCGTTCCTCGTGTCCGGCGCCGAGAAGCGGGCGGCGCTCGGGCGGCTCC TCGCCCCCGGCACGCCCTCGATCCCGGCGGCGCGGGTGCGTCCGCTCGACGGCGCGCTCCTCGTGCTGGCCGACCGCGCG GCGGCAGGGTAG
Upstream 100 bases:
>100_bases GCGACTTCCCGAACTACGCCGCGGGGAGCTGGGGGCCCGCGGCGGCGTCCGAGCTGCTCGCGCGCGACGGGCGGCGCTGG GCGGACCGGGAGTGACCCCG
Downstream 100 bases:
>100_bases GCGCTCGCCCGGTGGGCCTCCGGGCGGGCATCGGAGGGACCCCACGACCGTGCGTCCTCCTGGCGCAGGGTCCCCCGCAG GCGGTTGGAGGGCCAACCGA
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MARPPGPALVRAADAAALARVAAEEVARRAEEAVAARGRFAIALAGGSTPRALYALLADPAAPWRERVPWARTEIWFGDE RCVPPDHPDSNYRTAGEALLEHVPAAAVHRIEGERPPAEAAAGYEAALRRAADPDGSPPRLDLVLLGLGADGHTASLFPG SPALDERARWVAAPFVPAVGAHRITLTLPVLERARAIAFLVSGAEKRAALGRLLAPGTPSIPAARVRPLDGALLVLADRA AAG
Sequences:
>Translated_243_residues MARPPGPALVRAADAAALARVAAEEVARRAEEAVAARGRFAIALAGGSTPRALYALLADPAAPWRERVPWARTEIWFGDE RCVPPDHPDSNYRTAGEALLEHVPAAAVHRIEGERPPAEAAAGYEAALRRAADPDGSPPRLDLVLLGLGADGHTASLFPG SPALDERARWVAAPFVPAVGAHRITLTLPVLERARAIAFLVSGAEKRAALGRLLAPGTPSIPAARVRPLDGALLVLADRA AAG >Mature_242_residues ARPPGPALVRAADAAALARVAAEEVARRAEEAVAARGRFAIALAGGSTPRALYALLADPAAPWRERVPWARTEIWFGDER CVPPDHPDSNYRTAGEALLEHVPAAAVHRIEGERPPAEAAAGYEAALRRAADPDGSPPRLDLVLLGLGADGHTASLFPGS PALDERARWVAAPFVPAVGAHRITLTLPVLERARAIAFLVSGAEKRAALGRLLAPGTPSIPAARVRPLDGALLVLADRAA AG
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=247, Percent_Identity=40.4858299595142, Blast_Score=121, Evalue=4e-28, Organism=Homo sapiens, GI52145310, Length=240, Percent_Identity=35.4166666666667, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI115533058, Length=244, Percent_Identity=31.5573770491803, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI115533060, Length=244, Percent_Identity=31.5573770491803, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321957, Length=227, Percent_Identity=34.8017621145374, Blast_Score=120, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6321687, Length=249, Percent_Identity=30.9236947791165, Blast_Score=103, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6319918, Length=200, Percent_Identity=33.5, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324362, Length=199, Percent_Identity=31.6582914572864, Blast_Score=90, Evalue=4e-19, Organism=Drosophila melanogaster, GI24641119, Length=232, Percent_Identity=31.8965517241379, Blast_Score=110, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25314; Mature: 25183
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPPGPALVRAADAAALARVAAEEVARRAEEAVAARGRFAIALAGGSTPRALYALLADP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCC AAPWRERVPWARTEIWFGDERCVPPDHPDSNYRTAGEALLEHVPAAAVHRIEGERPPAEA CCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHH AAGYEAALRRAADPDGSPPRLDLVLLGLGADGHTASLFPGSPALDERARWVAAPFVPAVG HCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCHHHHHHEECCCCCCCCC AHRITLTLPVLERARAIAFLVSGAEKRAALGRLLAPGTPSIPAARVRPLDGALLVLADRA CEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEEEECCC AAG CCC >Mature Secondary Structure ARPPGPALVRAADAAALARVAAEEVARRAEEAVAARGRFAIALAGGSTPRALYALLADP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCC AAPWRERVPWARTEIWFGDERCVPPDHPDSNYRTAGEALLEHVPAAAVHRIEGERPPAEA CCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHH AAGYEAALRRAADPDGSPPRLDLVLLGLGADGHTASLFPGSPALDERARWVAAPFVPAVG HCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCHHHHHHEECCCCCCCCC AHRITLTLPVLERARAIAFLVSGAEKRAALGRLLAPGTPSIPAARVRPLDGALLVLADRA CEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEEEECCC AAG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]