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The map label for this gene is bphP [H]

Identifier: 220917583

GI number: 220917583

Start: 2742802

End: 2743956

Strand: Reverse

Name: bphP [H]

Synonym: A2cp1_2483

Alternate gene names: 220917583

Gene position: 2743956-2742802 (Counterclockwise)

Preceding gene: 220917584

Following gene: 220917581

Centisome position: 54.56

GC content: 74.2

Gene sequence:

>1155_bases
TTGTACGCTCCGGAATCGGTGCCCTCTCCAGCGCTCGGCGACGGTCGAGGCGCGGCCGAGGTCGTGCTCGAGTCGCACTT
CCTCCTTCGCGCGGTGTTCGAGGAGGCCCCCGTCGGCATCGGGATGCTCGACCCGGGCTTCCGGTTCGTGCGCGTGAACC
CGAAGCTCGCTGCGCTCAACGGGATCCCTGCCGAGGCACACCTCGGCAGGACACCGCGCGAGCTGTTTCCGGCGCTCCCG
ATCGACGACCTGGAGGCGATCTGGCGCCGCGTGCTGGACACCGGGAAGCCGGTGCTCGGCTACGAGTTCTGCGGCGAGAC
GCCGGCCGCGCCGGGCAAGACCCGGTGGTGGCGGGAGGACTGGTTCCCGGTCGTGGCGCACGGGCGCGTGGTCGGCCTCG
CCTTCGTGGTCGCCGAGGTGACCGAGGAGAGGCGCGCGGGGGAGCTGCAGCGTCTCCTCGTGGGCATCGTGGGCCACGAC
CTGCGAAACCCGCTGGCGGTGATCACGACCAGCGCCCGGCTGCTGTTCGCGGGCGGGCTCGGCGCGCGAGAGGCGGACGC
GGTCCGGCGCATCGACCGGGCGGCGCGCCGCATCGAGGCGCTGGCTCGCGACCTCCTCGACTACACGTGCATGAGGGGCG
GTGGCAGCCTCGGCGTGAGGCCTCGGCCCGGGGCCGACCTGTCCCGGATCGTCGAGGCCGCCGCCGAGGAGGCCCGGGTC
GCCTACCCGGGCGTGGTCCTCGAGTGCAGCGCGGGCCCCGACGTGCAGGGCGAGTGGGACGAGGATCGGTTGGCCCAGCT
CGCCGGGAACCTGCTGTCGAACGCGGCCAAGTACGGGACGCGCGGCGAGCCCGTGGTGGCGCGCGTGTACGCCGACGGCG
ACGAGGTGGTCCTGGAGGTCCACAACGGCGGCACTCCCATCCCGGTCGAGCGCCTTCCGCGCGTGTTCGACGGCCTCTCG
CAGTGGACCGACGAGCGGATGCGGCAGGGCGGCATCGGCCTCGGGCTGTTCATCTGCCGCGAGATCGTGCGCGCGCACGG
GGGCACCATCGAGATCGCCTCGACCGAGGCCGACGGGACCACCGTGCGCGTCCAGCTGCCGCGGAGCGCGCCCGGGCCCG
ACGGCGGGGTCGCGACGCCTCGCGGCGCCGGCTGA

Upstream 100 bases:

>100_bases
GCGGCTCGGACCGGGGCTCGTCCGCGTGGCCGTCCCCGCCGACGAGGCTGGGCTCGCGCGAGGGCTCGTCGCAGGATGGC
GCGAACACGGGAGGCTCGCC

Downstream 100 bases:

>100_bases
CGGGGTCAGCGCTCGGCGCGGCGGACCGCGGCGCCGGCGCGGGCGCCGGCGAGCACCAGGTCCACGAGCTGCTCGATGTA
CGCGAGGCTCGGCTGCTCGC

Product: PAS/PAC sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MYAPESVPSPALGDGRGAAEVVLESHFLLRAVFEEAPVGIGMLDPGFRFVRVNPKLAALNGIPAEAHLGRTPRELFPALP
IDDLEAIWRRVLDTGKPVLGYEFCGETPAAPGKTRWWREDWFPVVAHGRVVGLAFVVAEVTEERRAGELQRLLVGIVGHD
LRNPLAVITTSARLLFAGGLGAREADAVRRIDRAARRIEALARDLLDYTCMRGGGSLGVRPRPGADLSRIVEAAAEEARV
AYPGVVLECSAGPDVQGEWDEDRLAQLAGNLLSNAAKYGTRGEPVVARVYADGDEVVLEVHNGGTPIPVERLPRVFDGLS
QWTDERMRQGGIGLGLFICREIVRAHGGTIEIASTEADGTTVRVQLPRSAPGPDGGVATPRGAG

Sequences:

>Translated_384_residues
MYAPESVPSPALGDGRGAAEVVLESHFLLRAVFEEAPVGIGMLDPGFRFVRVNPKLAALNGIPAEAHLGRTPRELFPALP
IDDLEAIWRRVLDTGKPVLGYEFCGETPAAPGKTRWWREDWFPVVAHGRVVGLAFVVAEVTEERRAGELQRLLVGIVGHD
LRNPLAVITTSARLLFAGGLGAREADAVRRIDRAARRIEALARDLLDYTCMRGGGSLGVRPRPGADLSRIVEAAAEEARV
AYPGVVLECSAGPDVQGEWDEDRLAQLAGNLLSNAAKYGTRGEPVVARVYADGDEVVLEVHNGGTPIPVERLPRVFDGLS
QWTDERMRQGGIGLGLFICREIVRAHGGTIEIASTEADGTTVRVQLPRSAPGPDGGVATPRGAG
>Mature_384_residues
MYAPESVPSPALGDGRGAAEVVLESHFLLRAVFEEAPVGIGMLDPGFRFVRVNPKLAALNGIPAEAHLGRTPRELFPALP
IDDLEAIWRRVLDTGKPVLGYEFCGETPAAPGKTRWWREDWFPVVAHGRVVGLAFVVAEVTEERRAGELQRLLVGIVGHD
LRNPLAVITTSARLLFAGGLGAREADAVRRIDRAARRIEALARDLLDYTCMRGGGSLGVRPRPGADLSRIVEAAAEEARV
AYPGVVLECSAGPDVQGEWDEDRLAQLAGNLLSNAAKYGTRGEPVVARVYADGDEVVLEVHNGGTPIPVERLPRVFDGLS
QWTDERMRQGGIGLGLFICREIVRAHGGTIEIASTEADGTTVRVQLPRSAPGPDGGVATPRGAG

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI145693157, Length=229, Percent_Identity=29.2576419213974, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI48994928, Length=224, Percent_Identity=27.6785714285714, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87082128, Length=223, Percent_Identity=27.8026905829596, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786783, Length=219, Percent_Identity=30.1369863013699, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=28.3185840707965, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87081816, Length=243, Percent_Identity=27.5720164609054, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1786600, Length=238, Percent_Identity=26.0504201680672, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789149, Length=231, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786912, Length=227, Percent_Identity=27.3127753303965, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788713, Length=224, Percent_Identity=24.5535714285714, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41111; Mature: 41111

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAPESVPSPALGDGRGAAEVVLESHFLLRAVFEEAPVGIGMLDPGFRFVRVNPKLAALN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCEEECC
GIPAEAHLGRTPRELFPALPIDDLEAIWRRVLDTGKPVLGYEFCGETPAAPGKTRWWRED
CCCCHHHCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCCHHC
WFPVVAHGRVVGLAFVVAEVTEERRAGELQRLLVGIVGHDLRNPLAVITTSARLLFAGGL
CCEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCC
GAREADAVRRIDRAARRIEALARDLLDYTCMRGGGSLGVRPRPGADLSRIVEAAAEEARV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCEE
AYPGVVLECSAGPDVQGEWDEDRLAQLAGNLLSNAAKYGTRGEPVVARVYADGDEVVLEV
ECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEE
HNGGTPIPVERLPRVFDGLSQWTDERMRQGGIGLGLFICREIVRAHGGTIEIASTEADGT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
TVRVQLPRSAPGPDGGVATPRGAG
EEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYAPESVPSPALGDGRGAAEVVLESHFLLRAVFEEAPVGIGMLDPGFRFVRVNPKLAALN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCEEECC
GIPAEAHLGRTPRELFPALPIDDLEAIWRRVLDTGKPVLGYEFCGETPAAPGKTRWWRED
CCCCHHHCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCCHHC
WFPVVAHGRVVGLAFVVAEVTEERRAGELQRLLVGIVGHDLRNPLAVITTSARLLFAGGL
CCEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCC
GAREADAVRRIDRAARRIEALARDLLDYTCMRGGGSLGVRPRPGADLSRIVEAAAEEARV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCEE
AYPGVVLECSAGPDVQGEWDEDRLAQLAGNLLSNAAKYGTRGEPVVARVYADGDEVVLEV
ECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEE
HNGGTPIPVERLPRVFDGLSQWTDERMRQGGIGLGLFICREIVRAHGGTIEIASTEADGT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
TVRVQLPRSAPGPDGGVATPRGAG
EEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]