| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917493
Identifier: 220917493
GI number: 220917493
Start: 2651662
End: 2652939
Strand: Reverse
Name: 220917493
Synonym: A2cp1_2393
Alternate gene names: NA
Gene position: 2652939-2651662 (Counterclockwise)
Preceding gene: 220917494
Following gene: 220917492
Centisome position: 52.75
GC content: 80.75
Gene sequence:
>1278_bases GTGCGCGGCGCGCTCGCCATCCTCGTGGCCGCGCTCGCGGCGGCCTGCGCGCGGCCGGCGCCGGAGCGCCCGTTCGTGCT GCGGCTCGCCGTGGTCGGGCGCTTCTCGCCGCTCGATCCGCTCGGGAGCGAGGGGCACGCCATGCTGGCCCATGACCTCG TGTACCAGGGCGCGCTCGCGCCCGGGGCGGACGGCACGCCGCGCCCCGGCGTCGCGCGGGTGGTGGAGCGGCGCGGTGCG GGGCGCTGCCGGCTGCGGGTCGAGCCGGCGGCGGCGTTCTCCGACGGCGCGCCGGTGACGCCGGAGGACCTGGCCCGCTC GGCGCGCGCCGCAGGGCTCGAGGCCGAGGTCGCGCCGGACGGCACCGTGACGGTCTCGTCCGGGCGGCGGCCGGTGGAGG GCGCGCTGCTCTTCACCGCGGTGTTCCGCGCCGGCGCGCGGGGCGCGCTGGGCACCGGCCCGTACCGGATGGTGGAGCAG TCCGCGGATCGCATGGTCCTCGAGCGCGTGCGCCCGTCGCCGCGCCGCATCGCGCGGGTGGAGGTCCTCGGCTTTCCCAG CGAGCGCGACGCGCTCGCGCGCCTGCTGCGCGGCGACGTGAACGCGATGATCGGGCTGGACCGGCGCTCCATGGACCTGC TTCAGGACGTCCCGGGGCTGCGGCCGGTCCGCTCGCCAGGCCCGCACGCGTGGACGGTGATCCTGAACGAGCGGCGGCTG GGCGGCGCGCAGCGACGGCGGCTGCAGGCGGCGCTGCCGGCCGCGGAGCTGGCCGCCGCGGTCTGCGGCGCGGAGGCGGC CTCGGGCGCGCCCCCGGCCGCCGAGCGGCCGGCGCAGGAGATCCCGCCGGGCGCGCCGCTCCGGATCCTGGTCGTGGGCG AGGGCGTGGGCGAGCGCCGCGGCGCCCTGGCGCTGCGGCGGGCGCTCGGCCGCCGCGGGGGCGAGATCGTCCCGTTCGAT CCGGGCGCCGGCGTGGCGGAGCAGATCGCCGGGGCGGACCTGGTGCTGACGCGCCAGGTGGTGTGGCCGCCCATCGCGGT GGCCCAGGTGTGGGCGGCGGGCGCGCCGTTCGCGGCCGCCGGGTACCGCGACGCCGAGCTCGAGGCCGCCATCGCGCGGG GCGACGCCGACGCCGCCGTCCGCCGCCTGCGCGAGGACGGCCCGGCCGTGAGCCTGTGCCGGACCACGCGCGCCGGCGCG GTGGACGCGCGGATCCGCGGGGCGGTCTTCGGCTGGGGCGCGCTCGACACGCTGCCGGACTGGGAGGTCGCGCCGTGA
Upstream 100 bases:
>100_bases AAGAAGCAGATCGTGCAGAAGTACGGCGATGGCGTGGTGTTCGAGAAGGGCAAGCCCGCGCCCAAGCCCCGGTAGCGGCC CGGCGGCTCCCCGGCGCGCG
Downstream 100 bases:
>100_bases CGCGCGAGAAGGTGGCGGCGCGCCTGATCGTCATGCTGGCGCTCACCGGCGTCGCGCCGATCGTGGCGCTCGGGGCGGTC GGCATCGAGGCGATGCGCCG
Product: family 5 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MRGALAILVAALAAACARPAPERPFVLRLAVVGRFSPLDPLGSEGHAMLAHDLVYQGALAPGADGTPRPGVARVVERRGA GRCRLRVEPAAAFSDGAPVTPEDLARSARAAGLEAEVAPDGTVTVSSGRRPVEGALLFTAVFRAGARGALGTGPYRMVEQ SADRMVLERVRPSPRRIARVEVLGFPSERDALARLLRGDVNAMIGLDRRSMDLLQDVPGLRPVRSPGPHAWTVILNERRL GGAQRRRLQAALPAAELAAAVCGAEAASGAPPAAERPAQEIPPGAPLRILVVGEGVGERRGALALRRALGRRGGEIVPFD PGAGVAEQIAGADLVLTRQVVWPPIAVAQVWAAGAPFAAAGYRDAELEAAIARGDADAAVRRLREDGPAVSLCRTTRAGA VDARIRGAVFGWGALDTLPDWEVAP
Sequences:
>Translated_425_residues MRGALAILVAALAAACARPAPERPFVLRLAVVGRFSPLDPLGSEGHAMLAHDLVYQGALAPGADGTPRPGVARVVERRGA GRCRLRVEPAAAFSDGAPVTPEDLARSARAAGLEAEVAPDGTVTVSSGRRPVEGALLFTAVFRAGARGALGTGPYRMVEQ SADRMVLERVRPSPRRIARVEVLGFPSERDALARLLRGDVNAMIGLDRRSMDLLQDVPGLRPVRSPGPHAWTVILNERRL GGAQRRRLQAALPAAELAAAVCGAEAASGAPPAAERPAQEIPPGAPLRILVVGEGVGERRGALALRRALGRRGGEIVPFD PGAGVAEQIAGADLVLTRQVVWPPIAVAQVWAAGAPFAAAGYRDAELEAAIARGDADAAVRRLREDGPAVSLCRTTRAGA VDARIRGAVFGWGALDTLPDWEVAP >Mature_425_residues MRGALAILVAALAAACARPAPERPFVLRLAVVGRFSPLDPLGSEGHAMLAHDLVYQGALAPGADGTPRPGVARVVERRGA GRCRLRVEPAAAFSDGAPVTPEDLARSARAAGLEAEVAPDGTVTVSSGRRPVEGALLFTAVFRAGARGALGTGPYRMVEQ SADRMVLERVRPSPRRIARVEVLGFPSERDALARLLRGDVNAMIGLDRRSMDLLQDVPGLRPVRSPGPHAWTVILNERRL GGAQRRRLQAALPAAELAAAVCGAEAASGAPPAAERPAQEIPPGAPLRILVVGEGVGERRGALALRRALGRRGGEIVPFD PGAGVAEQIAGADLVLTRQVVWPPIAVAQVWAAGAPFAAAGYRDAELEAAIARGDADAAVRRLREDGPAVSLCRTTRAGA VDARIRGAVFGWGALDTLPDWEVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44275; Mature: 44275
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGALAILVAALAAACARPAPERPFVLRLAVVGRFSPLDPLGSEGHAMLAHDLVYQGALA CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCC PGADGTPRPGVARVVERRGAGRCRLRVEPAAAFSDGAPVTPEDLARSARAAGLEAEVAPD CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCC GTVTVSSGRRPVEGALLFTAVFRAGARGALGTGPYRMVEQSADRMVLERVRPSPRRIARV CCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEE EVLGFPSERDALARLLRGDVNAMIGLDRRSMDLLQDVPGLRPVRSPGPHAWTVILNERRL EEECCCCHHHHHHHHHHCCCHHEEECCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHC GGAQRRRLQAALPAAELAAAVCGAEAASGAPPAAERPAQEIPPGAPLRILVVGEGVGERR CHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCHH GALALRRALGRRGGEIVPFDPGAGVAEQIAGADLVLTRQVVWPPIAVAQVWAAGAPFAAA HHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCEEEEHHHHCCCHHHHHHHHCCCCCHHC GYRDAELEAAIARGDADAAVRRLREDGPAVSLCRTTRAGAVDARIRGAVFGWGALDTLPD CCCCHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCCCCCCCHHHCCEEEECCCCCCCCC WEVAP CCCCC >Mature Secondary Structure MRGALAILVAALAAACARPAPERPFVLRLAVVGRFSPLDPLGSEGHAMLAHDLVYQGALA CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCC PGADGTPRPGVARVVERRGAGRCRLRVEPAAAFSDGAPVTPEDLARSARAAGLEAEVAPD CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCC GTVTVSSGRRPVEGALLFTAVFRAGARGALGTGPYRMVEQSADRMVLERVRPSPRRIARV CCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEE EVLGFPSERDALARLLRGDVNAMIGLDRRSMDLLQDVPGLRPVRSPGPHAWTVILNERRL EEECCCCHHHHHHHHHHCCCHHEEECCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHC GGAQRRRLQAALPAAELAAAVCGAEAASGAPPAAERPAQEIPPGAPLRILVVGEGVGERR CHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCHH GALALRRALGRRGGEIVPFDPGAGVAEQIAGADLVLTRQVVWPPIAVAQVWAAGAPFAAA HHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCEEEEHHHHCCCHHHHHHHHCCCCCHHC GYRDAELEAAIARGDADAAVRRLREDGPAVSLCRTTRAGAVDARIRGAVFGWGALDTLPD CCCCHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCCCCCCCHHHCCEEEECCCCCCCCC WEVAP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA