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The map label for this gene is nusG [H]

Identifier: 220917464

GI number: 220917464

Start: 2622837

End: 2623376

Strand: Reverse

Name: nusG [H]

Synonym: A2cp1_2364

Alternate gene names: 220917464

Gene position: 2623376-2622837 (Counterclockwise)

Preceding gene: 220917465

Following gene: 220917463

Centisome position: 52.16

GC content: 63.7

Gene sequence:

>540_bases
ATGGCGAAGAAGTGGTACGTCGTCCACACCTACTCGGGGTTCGAGAACAAGGTGAAGAAGTCGCTCGACGAGCGCATCCG
GCAGCACTCGCTGCAGGACGCGTTCGGCGAGGTGCTCATCCCGATGGAGGTGGTCCAGGAGATGGTGAAGGGGGAGAAGA
AGACCTCCAAGCGGAAGTTCTTCCCCGGCTACATCCTGGTGAACATGGAGATGAGCCTGCAGACCTGGCACCTCGTGAAG
GGGACGCCGAAGGTCACCGGGTTCGTCGGCAACGCGAAGACGCCGGAGCAGGTCCCGGCGGTGTCCGACGTCGAGGTGCA
GCGGCTCACCACGCAGATCTCCGAGGGCTCGCTCAAGCCGAAGCCCAAGGTGCAGTTCGAGGAGGGCGACTCGGTCCGCG
TGACCGACGGCCCGTTCTCGAACTTCAACGGCACCGTCGAGGAGGTCAAGCCGGACAAGGGCAAGCTCCGGGTGCTGGTG
TCGATCTTCGGCCGCGCCACGCCGGTAGAGCTCGACTTCATGCAGGTGGAGAAGACCTAG

Upstream 100 bases:

>100_bases
TTCTTCGCGGCCGGGACGGAGCCGCGGCGGTTGGGGGCCGCCAGCACGGCTCCATCGGCGTTTTCTGGAATCGACGCGCG
GGCGACGGAACGGAGCGGTC

Downstream 100 bases:

>100_bases
CCTTTGCAGGGCCCCGCGGCGTCCGCCGCGGGGGGAACGACGGCGTGGGAGAGCGATGAGCTCGCTTGCACCACGCGAGG
AGCGACGATGAAGAAGGTCA

Product: NusG antitermination factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MAKKWYVVHTYSGFENKVKKSLDERIRQHSLQDAFGEVLIPMEVVQEMVKGEKKTSKRKFFPGYILVNMEMSLQTWHLVK
GTPKVTGFVGNAKTPEQVPAVSDVEVQRLTTQISEGSLKPKPKVQFEEGDSVRVTDGPFSNFNGTVEEVKPDKGKLRVLV
SIFGRATPVELDFMQVEKT

Sequences:

>Translated_179_residues
MAKKWYVVHTYSGFENKVKKSLDERIRQHSLQDAFGEVLIPMEVVQEMVKGEKKTSKRKFFPGYILVNMEMSLQTWHLVK
GTPKVTGFVGNAKTPEQVPAVSDVEVQRLTTQISEGSLKPKPKVQFEEGDSVRVTDGPFSNFNGTVEEVKPDKGKLRVLV
SIFGRATPVELDFMQVEKT
>Mature_178_residues
AKKWYVVHTYSGFENKVKKSLDERIRQHSLQDAFGEVLIPMEVVQEMVKGEKKTSKRKFFPGYILVNMEMSLQTWHLVKG
TPKVTGFVGNAKTPEQVPAVSDVEVQRLTTQISEGSLKPKPKVQFEEGDSVRVTDGPFSNFNGTVEEVKPDKGKLRVLVS
IFGRATPVELDFMQVEKT

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=177, Percent_Identity=52.5423728813559, Blast_Score=195, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20232; Mature: 20100

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKWYVVHTYSGFENKVKKSLDERIRQHSLQDAFGEVLIPMEVVQEMVKGEKKTSKRKF
CCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCHHCCCCCC
FPGYILVNMEMSLQTWHLVKGTPKVTGFVGNAKTPEQVPAVSDVEVQRLTTQISEGSLKP
CCCEEEEEEEECCEEEEEECCCCCEEEEECCCCCHHHCCCCCCHHHHHHHHHHHCCCCCC
KPKVQFEEGDSVRVTDGPFSNFNGTVEEVKPDKGKLRVLVSIFGRATPVELDFMQVEKT
CCCEEECCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEEEHHCCCCCCEEEEEEEECC
>Mature Secondary Structure 
AKKWYVVHTYSGFENKVKKSLDERIRQHSLQDAFGEVLIPMEVVQEMVKGEKKTSKRKF
CCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCHHCCCCCC
FPGYILVNMEMSLQTWHLVKGTPKVTGFVGNAKTPEQVPAVSDVEVQRLTTQISEGSLKP
CCCEEEEEEEECCEEEEEECCCCCEEEEECCCCCHHHCCCCCCHHHHHHHHHHHCCCCCC
KPKVQFEEGDSVRVTDGPFSNFNGTVEEVKPDKGKLRVLVSIFGRATPVELDFMQVEKT
CCCEEECCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEEEHHCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]