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The map label for this gene is nrfD [C]

Identifier: 220916902

GI number: 220916902

Start: 2008411

End: 2009586

Strand: Direct

Name: nrfD [C]

Synonym: A2cp1_1798

Alternate gene names: 220916902

Gene position: 2008411-2009586 (Clockwise)

Preceding gene: 220916901

Following gene: 220916903

Centisome position: 39.93

GC content: 73.3

Gene sequence:

>1176_bases
ATGAGCATCACCGAGCTCGTCCAGCCGGTCTGGCCCGTGGCCTGGAGCCTCGCCGTCCCGCAGTACTTCTTCATGACCGG
CGTCTCGGCCGCCGCGTTCCTGGTCTCCTCGCTCACCTACGCGTTCGGCGACGGCCGGTACCGCCCGGTGGCGGGGCTCT
CGCTCATCGTGGCGCTCACGGTGCTGCTCGCCGCGCCGCTGAACCTCATCGCGGACCTGGGCCAGCCCGGCCGGTTCTAC
GAGCTCACCTTCGCCCTCCACGGCACCGCGCCCATGTCCTGGGGCGTGTTCCTGCTCACCACCTACCCGGCGCTCATCCT
GCTCGAGATCCTGTTCGCGTACCGCGGCGCGCTGGCGGAGCGCGCCGCCTCTGCGCGAGGCCGGATGGCGACGGTGTACC
GCTGGCTCGCGGCCGGCCGCACGTCGGTGGACGCGGCGGAGCGCGCGCGGACGCACCGGGTGTCGCGCCGCCTCGCGCTC
CTCGGGATCCCGTGGGCGCTCGCGGTGCACGGGTACACCGGCTACATCCTCGGCGTCATGAAGGCGCGGCCGCTCTGGCA
CACCGCGCTCATGCCCATCGTGTTCCTGGTGTCCGCGATGGTGTCCGGCGTGGCGCTGCTCATCCTGGTGGCGGCGCTGT
TCCAGCGGCTCGACACCGCCGGCGGACGCGTGGACCGGGAGCTCCTCGAGCGGCTGGCCCGCATGCTCGCCGGCTTCATC
GTGCTGGACCTCCTGCTCCGGCTGTTCTGGTACACGATCCAGTGGATGTACGGCGTCGGCGCCTACGGCCCGGTGCTGCA
GCACCTGTTCGTGGACTCGTTCTGGACCGCGGTGGTGCTCGAGACCGTGCTGGGCCTGCTCGTGCCGCTGGCCGTGGCGC
TCGTGCCCGGCTGGCGCCGGCGCGGGTGGCTCCTGTTCCCGGCCGCGGCGCTGGCGGTGACGGGCGTCTGGGTGTTCCGC
TGGGACACCGTCATCGGCGGGCAGCTCATCCCCAAGGTCGGCGCGGGCTTCTACGCGTACGCGCCGCCGCTCGGCGGCAA
GGACGGCGTGCTGCAGGTCGTGGGGAACTGGGCCTTCTGGATCTTCCTGCTCCTCGGGGCGACCTCGCTGCTGCCGTGGC
AGCGCGAGGCCGGCGGCGCGCCGGCCGGCGAGGCCGCGGCGGCGGAGGTGCGGTGA

Upstream 100 bases:

>100_bases
ACGCCGAGGTCGCGGCGCGGCCGGACGCGGCGCGGCCCACGCTGTGGGACGCGGAGGACCTGGGCATCGAGGCCACCACC
CGCGTGGCCGGGGAGGGCGC

Downstream 100 bases:

>100_bases
TGGCGACGCGACGGGGCGTGCTGAAGGGGCTTGGGGCGCTCGGTGCCCTGGGGATCTTTGCGGCGGGCTACGCGCCGACG
CTGCGCAAGCTCGGACGCGG

Product: polysulfide reductase NrfD

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Molybdopterin Oxidoreductase Membrane Subunit; Tetrathionate Reductase Subunit C; Tetrathionate Reductase Complex Subunit C; Oxidoreductase Membrane Subunit; Polysulphide Reductase Nrfd; Polysulphide Reductase

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSITELVQPVWPVAWSLAVPQYFFMTGVSAAAFLVSSLTYAFGDGRYRPVAGLSLIVALTVLLAAPLNLIADLGQPGRFY
ELTFALHGTAPMSWGVFLLTTYPALILLEILFAYRGALAERAASARGRMATVYRWLAAGRTSVDAAERARTHRVSRRLAL
LGIPWALAVHGYTGYILGVMKARPLWHTALMPIVFLVSAMVSGVALLILVAALFQRLDTAGGRVDRELLERLARMLAGFI
VLDLLLRLFWYTIQWMYGVGAYGPVLQHLFVDSFWTAVVLETVLGLLVPLAVALVPGWRRRGWLLFPAAALAVTGVWVFR
WDTVIGGQLIPKVGAGFYAYAPPLGGKDGVLQVVGNWAFWIFLLLGATSLLPWQREAGGAPAGEAAAAEVR

Sequences:

>Translated_391_residues
MSITELVQPVWPVAWSLAVPQYFFMTGVSAAAFLVSSLTYAFGDGRYRPVAGLSLIVALTVLLAAPLNLIADLGQPGRFY
ELTFALHGTAPMSWGVFLLTTYPALILLEILFAYRGALAERAASARGRMATVYRWLAAGRTSVDAAERARTHRVSRRLAL
LGIPWALAVHGYTGYILGVMKARPLWHTALMPIVFLVSAMVSGVALLILVAALFQRLDTAGGRVDRELLERLARMLAGFI
VLDLLLRLFWYTIQWMYGVGAYGPVLQHLFVDSFWTAVVLETVLGLLVPLAVALVPGWRRRGWLLFPAAALAVTGVWVFR
WDTVIGGQLIPKVGAGFYAYAPPLGGKDGVLQVVGNWAFWIFLLLGATSLLPWQREAGGAPAGEAAAAEVR
>Mature_390_residues
SITELVQPVWPVAWSLAVPQYFFMTGVSAAAFLVSSLTYAFGDGRYRPVAGLSLIVALTVLLAAPLNLIADLGQPGRFYE
LTFALHGTAPMSWGVFLLTTYPALILLEILFAYRGALAERAASARGRMATVYRWLAAGRTSVDAAERARTHRVSRRLALL
GIPWALAVHGYTGYILGVMKARPLWHTALMPIVFLVSAMVSGVALLILVAALFQRLDTAGGRVDRELLERLARMLAGFIV
LDLLLRLFWYTIQWMYGVGAYGPVLQHLFVDSFWTAVVLETVLGLLVPLAVALVPGWRRRGWLLFPAAALAVTGVWVFRW
DTVIGGQLIPKVGAGFYAYAPPLGGKDGVLQVVGNWAFWIFLLLGATSLLPWQREAGGAPAGEAAAAEVR

Specific function: Probably Involved In The Transfer Of Electrons From The Quinone Pool To The Type-C Cytochromes. [C]

COG id: COG4881

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42537; Mature: 42406

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITELVQPVWPVAWSLAVPQYFFMTGVSAAAFLVSSLTYAFGDGRYRPVAGLSLIVALT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VLLAAPLNLIADLGQPGRFYELTFALHGTAPMSWGVFLLTTYPALILLEILFAYRGALAE
HHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAASARGRMATVYRWLAAGRTSVDAAERARTHRVSRRLALLGIPWALAVHGYTGYILGVM
HHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH
KARPLWHTALMPIVFLVSAMVSGVALLILVAALFQRLDTAGGRVDRELLERLARMLAGFI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VLDLLLRLFWYTIQWMYGVGAYGPVLQHLFVDSFWTAVVLETVLGLLVPLAVALVPGWRR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RGWLLFPAAALAVTGVWVFRWDTVIGGQLIPKVGAGFYAYAPPLGGKDGVLQVVGNWAFW
CCEEEEHHHHHHHHHHHHEEEHHHHCCHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHH
IFLLLGATSLLPWQREAGGAPAGEAAAAEVR
HHHHHHHHHCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SITELVQPVWPVAWSLAVPQYFFMTGVSAAAFLVSSLTYAFGDGRYRPVAGLSLIVALT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VLLAAPLNLIADLGQPGRFYELTFALHGTAPMSWGVFLLTTYPALILLEILFAYRGALAE
HHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAASARGRMATVYRWLAAGRTSVDAAERARTHRVSRRLALLGIPWALAVHGYTGYILGVM
HHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH
KARPLWHTALMPIVFLVSAMVSGVALLILVAALFQRLDTAGGRVDRELLERLARMLAGFI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VLDLLLRLFWYTIQWMYGVGAYGPVLQHLFVDSFWTAVVLETVLGLLVPLAVALVPGWRR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RGWLLFPAAALAVTGVWVFRWDTVIGGQLIPKVGAGFYAYAPPLGGKDGVLQVVGNWAFW
CCEEEEHHHHHHHHHHHHEEEHHHHCCHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHH
IFLLLGATSLLPWQREAGGAPAGEAAAAEVR
HHHHHHHHHCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA