Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

Click here to switch to the map view.

The map label for this gene is 220916865

Identifier: 220916865

GI number: 220916865

Start: 1969480

End: 1970796

Strand: Direct

Name: 220916865

Synonym: A2cp1_1761

Alternate gene names: NA

Gene position: 1969480-1970796 (Clockwise)

Preceding gene: 220916864

Following gene: 220916866

Centisome position: 39.16

GC content: 72.13

Gene sequence:

>1317_bases
ATGAGCGTGAAGCACGACAAGAGTCACGAGGCCGGGGCGACGCACGACTTCCACGGCGGCATCTGCGGCTGCTGCGGGCC
GAGCGCGACGCGCGGGATGTCGGGCGCCGAGGTGGACCTCGCCGTCGAGCAGCGCGGCGAGCGCCTCACGCGGCTCGACG
AGGTGCGCGGCGACGACGTGGACCACCTGCTCTCGGCGCGCAGCCGCCGCGGGTTCCTGAAGGCCGGCGGCCTGTTCGGC
GCGCTGGCGGCGGCGGCGCCGGTCCTCTCCCGCGCCCGCGCGGAGGGCACCGGCGGCTTCAGCCTGTTCCAGCAGGGCGG
CGGCCGGGTGCACGTGGTCGAGTCCACCTACGAGACCACGAAGTGGGGCATCTTCGACTCCAACCTGCCCGACATCGTCC
AGATCGAGTCCGGGGACGTGGTCTCGTACCCGAACACCTGGAGCCACTTCCTCAACGACCTGCAGCCGGGCATGCCGATC
GAGGAGATCGCGCGCCTGCGCCTCGCCCACCCGGGCGTCGGGCCGCACTCGATCATCGGCCCCGTCGGCGTGCGCGACGC
CGAGCCGGGCGACGTGCTCGAGATCCAGTACCTGCGCGTCCGCCCCACCGACTGGGCGGTCTGCTTCAACAACCCGGGCG
CCCTCGGCACCGGCGCGCTGCCCGACGCCTTCCCGCAGGGGCAGGCCAAGTACTTCGATCTCGACACCGCCAACAACACC
TCCGAGTTCGCGCCGGGCATCCAGCTCCGGCTCGCGCCGTTCCAGGGCACCATGGGCGTCGCGCCGGCGAACGGCGTGTT
CCCCACGCCCCCGGGCCACGCCTACGGCGTGATCAGCTCGGTGCCGCCGGGGCAGCACGCCGGCAACGTGGACTGCCGCG
AGGCGGGCGAGGGCTCGCGCCTGTTCGTCCCGGTGTTCCAGCGCGGCGGCAAGATCTTCACCGGTGACTCGCACGCGCTG
CAGGGCGACGGCGAGGTGACGCTCACCGCGATGGAGACCGCGATGAAGGAGATCCGCGTCCGCGTGATCCTCCACAAGCA
GGTCGCGCTCGCCTGGCCGATGCACGAGACGCCGGACGCCTGGATCGTCCACGGCACGAACCCGGACCTCGACACCGCCT
TCCGCATCGCCCTGCTGAACGCGATCGACTTCCTCGAGGCCCGCGCCGGCCTGACCCGCCTCGACGCCTACGCCCTCTGC
AGCCTCGCGGTCAGCTTCCGCGTGACGCAGGTGGTGAACGGCCAGAAGGGCATCTACGGCGTCATCCCGAAGCGCATCTT
CCACCCGCAGCTCCGCGCCGCGATGGGCGTGATCTAG

Upstream 100 bases:

>100_bases
GGTCCTCCGGCCCCAGCCCACGTCTGCCCAGAGCACGCGTGGGCTTCGTCGTTTCGACGGGGCGGACGTGGTGAGGACGG
ACCAGCCAGGAGACGCGTCA

Downstream 100 bases:

>100_bases
CCCGCGGCCGGATCGCCGCTCCGCCGGGCTCCCGGCGGGGCGGCGGTCCACCCGTCACGCCCGCTCTTCTTCACCAGAGG
TCACCATGCGGAAGTTCTCG

Product: Acetamidase/Formamidase

Products: NA

Alternate protein names: Formamidase; Acetamidase/Formamidase Family Protein; Acetamidase; Amidase; Acetamidase/Formamidase Family; Transcriptional Regulator; AraC Family Transcriptional Regulator; Acetamidase/Formamidase Protein; Amidase-Related Protein; Amidae; Twin-Arginine Translocation Pathway Signal; Formamidase/Acetamidase; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSVKHDKSHEAGATHDFHGGICGCCGPSATRGMSGAEVDLAVEQRGERLTRLDEVRGDDVDHLLSARSRRGFLKAGGLFG
ALAAAAPVLSRARAEGTGGFSLFQQGGGRVHVVESTYETTKWGIFDSNLPDIVQIESGDVVSYPNTWSHFLNDLQPGMPI
EEIARLRLAHPGVGPHSIIGPVGVRDAEPGDVLEIQYLRVRPTDWAVCFNNPGALGTGALPDAFPQGQAKYFDLDTANNT
SEFAPGIQLRLAPFQGTMGVAPANGVFPTPPGHAYGVISSVPPGQHAGNVDCREAGEGSRLFVPVFQRGGKIFTGDSHAL
QGDGEVTLTAMETAMKEIRVRVILHKQVALAWPMHETPDAWIVHGTNPDLDTAFRIALLNAIDFLEARAGLTRLDAYALC
SLAVSFRVTQVVNGQKGIYGVIPKRIFHPQLRAAMGVI

Sequences:

>Translated_438_residues
MSVKHDKSHEAGATHDFHGGICGCCGPSATRGMSGAEVDLAVEQRGERLTRLDEVRGDDVDHLLSARSRRGFLKAGGLFG
ALAAAAPVLSRARAEGTGGFSLFQQGGGRVHVVESTYETTKWGIFDSNLPDIVQIESGDVVSYPNTWSHFLNDLQPGMPI
EEIARLRLAHPGVGPHSIIGPVGVRDAEPGDVLEIQYLRVRPTDWAVCFNNPGALGTGALPDAFPQGQAKYFDLDTANNT
SEFAPGIQLRLAPFQGTMGVAPANGVFPTPPGHAYGVISSVPPGQHAGNVDCREAGEGSRLFVPVFQRGGKIFTGDSHAL
QGDGEVTLTAMETAMKEIRVRVILHKQVALAWPMHETPDAWIVHGTNPDLDTAFRIALLNAIDFLEARAGLTRLDAYALC
SLAVSFRVTQVVNGQKGIYGVIPKRIFHPQLRAAMGVI
>Mature_437_residues
SVKHDKSHEAGATHDFHGGICGCCGPSATRGMSGAEVDLAVEQRGERLTRLDEVRGDDVDHLLSARSRRGFLKAGGLFGA
LAAAAPVLSRARAEGTGGFSLFQQGGGRVHVVESTYETTKWGIFDSNLPDIVQIESGDVVSYPNTWSHFLNDLQPGMPIE
EIARLRLAHPGVGPHSIIGPVGVRDAEPGDVLEIQYLRVRPTDWAVCFNNPGALGTGALPDAFPQGQAKYFDLDTANNTS
EFAPGIQLRLAPFQGTMGVAPANGVFPTPPGHAYGVISSVPPGQHAGNVDCREAGEGSRLFVPVFQRGGKIFTGDSHALQ
GDGEVTLTAMETAMKEIRVRVILHKQVALAWPMHETPDAWIVHGTNPDLDTAFRIALLNAIDFLEARAGLTRLDAYALCS
LAVSFRVTQVVNGQKGIYGVIPKRIFHPQLRAAMGVI

Specific function: Unknown

COG id: COG2421

COG function: function code C; Predicted acetamidase/formamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46818; Mature: 46686

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKHDKSHEAGATHDFHGGICGCCGPSATRGMSGAEVDLAVEQRGERLTRLDEVRGDDV
CCCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCEEEEHHHHHCHHHHHHHHHCCCCH
DHLLSARSRRGFLKAGGLFGALAAAAPVLSRARAEGTGGFSLFQQGGGRVHVVESTYETT
HHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCC
KWGIFDSNLPDIVQIESGDVVSYPNTWSHFLNDLQPGMPIEEIARLRLAHPGVGPHSIIG
CCCCCCCCCCCEEEECCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCCC
PVGVRDAEPGDVLEIQYLRVRPTDWAVCFNNPGALGTGALPDAFPQGQAKYFDLDTANNT
CCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
SEFAPGIQLRLAPFQGTMGVAPANGVFPTPPGHAYGVISSVPPGQHAGNVDCREAGEGSR
HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCE
LFVPVFQRGGKIFTGDSHALQGDGEVTLTAMETAMKEIRVRVILHKQVALAWPMHETPDA
EEEEHHHCCCEEEECCCCEECCCCCEEEHHHHHHHHHHHEEEEEEEHHHEECCCCCCCCC
WIVHGTNPDLDTAFRIALLNAIDFLEARAGLTRLDAYALCSLAVSFRVTQVVNGQKGIYG
EEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VIPKRIFHPQLRAAMGVI
CCHHHHHCHHHHHHHCCC
>Mature Secondary Structure 
SVKHDKSHEAGATHDFHGGICGCCGPSATRGMSGAEVDLAVEQRGERLTRLDEVRGDDV
CCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCEEEEHHHHHCHHHHHHHHHCCCCH
DHLLSARSRRGFLKAGGLFGALAAAAPVLSRARAEGTGGFSLFQQGGGRVHVVESTYETT
HHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCC
KWGIFDSNLPDIVQIESGDVVSYPNTWSHFLNDLQPGMPIEEIARLRLAHPGVGPHSIIG
CCCCCCCCCCCEEEECCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCCC
PVGVRDAEPGDVLEIQYLRVRPTDWAVCFNNPGALGTGALPDAFPQGQAKYFDLDTANNT
CCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
SEFAPGIQLRLAPFQGTMGVAPANGVFPTPPGHAYGVISSVPPGQHAGNVDCREAGEGSR
HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCE
LFVPVFQRGGKIFTGDSHALQGDGEVTLTAMETAMKEIRVRVILHKQVALAWPMHETPDA
EEEEHHHCCCEEEECCCCEECCCCCEEEHHHHHHHHHHHEEEEEEEHHHEECCCCCCCCC
WIVHGTNPDLDTAFRIALLNAIDFLEARAGLTRLDAYALCSLAVSFRVTQVVNGQKGIYG
EEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VIPKRIFHPQLRAAMGVI
CCHHHHHCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA