| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916865
Identifier: 220916865
GI number: 220916865
Start: 1969480
End: 1970796
Strand: Direct
Name: 220916865
Synonym: A2cp1_1761
Alternate gene names: NA
Gene position: 1969480-1970796 (Clockwise)
Preceding gene: 220916864
Following gene: 220916866
Centisome position: 39.16
GC content: 72.13
Gene sequence:
>1317_bases ATGAGCGTGAAGCACGACAAGAGTCACGAGGCCGGGGCGACGCACGACTTCCACGGCGGCATCTGCGGCTGCTGCGGGCC GAGCGCGACGCGCGGGATGTCGGGCGCCGAGGTGGACCTCGCCGTCGAGCAGCGCGGCGAGCGCCTCACGCGGCTCGACG AGGTGCGCGGCGACGACGTGGACCACCTGCTCTCGGCGCGCAGCCGCCGCGGGTTCCTGAAGGCCGGCGGCCTGTTCGGC GCGCTGGCGGCGGCGGCGCCGGTCCTCTCCCGCGCCCGCGCGGAGGGCACCGGCGGCTTCAGCCTGTTCCAGCAGGGCGG CGGCCGGGTGCACGTGGTCGAGTCCACCTACGAGACCACGAAGTGGGGCATCTTCGACTCCAACCTGCCCGACATCGTCC AGATCGAGTCCGGGGACGTGGTCTCGTACCCGAACACCTGGAGCCACTTCCTCAACGACCTGCAGCCGGGCATGCCGATC GAGGAGATCGCGCGCCTGCGCCTCGCCCACCCGGGCGTCGGGCCGCACTCGATCATCGGCCCCGTCGGCGTGCGCGACGC CGAGCCGGGCGACGTGCTCGAGATCCAGTACCTGCGCGTCCGCCCCACCGACTGGGCGGTCTGCTTCAACAACCCGGGCG CCCTCGGCACCGGCGCGCTGCCCGACGCCTTCCCGCAGGGGCAGGCCAAGTACTTCGATCTCGACACCGCCAACAACACC TCCGAGTTCGCGCCGGGCATCCAGCTCCGGCTCGCGCCGTTCCAGGGCACCATGGGCGTCGCGCCGGCGAACGGCGTGTT CCCCACGCCCCCGGGCCACGCCTACGGCGTGATCAGCTCGGTGCCGCCGGGGCAGCACGCCGGCAACGTGGACTGCCGCG AGGCGGGCGAGGGCTCGCGCCTGTTCGTCCCGGTGTTCCAGCGCGGCGGCAAGATCTTCACCGGTGACTCGCACGCGCTG CAGGGCGACGGCGAGGTGACGCTCACCGCGATGGAGACCGCGATGAAGGAGATCCGCGTCCGCGTGATCCTCCACAAGCA GGTCGCGCTCGCCTGGCCGATGCACGAGACGCCGGACGCCTGGATCGTCCACGGCACGAACCCGGACCTCGACACCGCCT TCCGCATCGCCCTGCTGAACGCGATCGACTTCCTCGAGGCCCGCGCCGGCCTGACCCGCCTCGACGCCTACGCCCTCTGC AGCCTCGCGGTCAGCTTCCGCGTGACGCAGGTGGTGAACGGCCAGAAGGGCATCTACGGCGTCATCCCGAAGCGCATCTT CCACCCGCAGCTCCGCGCCGCGATGGGCGTGATCTAG
Upstream 100 bases:
>100_bases GGTCCTCCGGCCCCAGCCCACGTCTGCCCAGAGCACGCGTGGGCTTCGTCGTTTCGACGGGGCGGACGTGGTGAGGACGG ACCAGCCAGGAGACGCGTCA
Downstream 100 bases:
>100_bases CCCGCGGCCGGATCGCCGCTCCGCCGGGCTCCCGGCGGGGCGGCGGTCCACCCGTCACGCCCGCTCTTCTTCACCAGAGG TCACCATGCGGAAGTTCTCG
Product: Acetamidase/Formamidase
Products: NA
Alternate protein names: Formamidase; Acetamidase/Formamidase Family Protein; Acetamidase; Amidase; Acetamidase/Formamidase Family; Transcriptional Regulator; AraC Family Transcriptional Regulator; Acetamidase/Formamidase Protein; Amidase-Related Protein; Amidae; Twin-Arginine Translocation Pathway Signal; Formamidase/Acetamidase; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSVKHDKSHEAGATHDFHGGICGCCGPSATRGMSGAEVDLAVEQRGERLTRLDEVRGDDVDHLLSARSRRGFLKAGGLFG ALAAAAPVLSRARAEGTGGFSLFQQGGGRVHVVESTYETTKWGIFDSNLPDIVQIESGDVVSYPNTWSHFLNDLQPGMPI EEIARLRLAHPGVGPHSIIGPVGVRDAEPGDVLEIQYLRVRPTDWAVCFNNPGALGTGALPDAFPQGQAKYFDLDTANNT SEFAPGIQLRLAPFQGTMGVAPANGVFPTPPGHAYGVISSVPPGQHAGNVDCREAGEGSRLFVPVFQRGGKIFTGDSHAL QGDGEVTLTAMETAMKEIRVRVILHKQVALAWPMHETPDAWIVHGTNPDLDTAFRIALLNAIDFLEARAGLTRLDAYALC SLAVSFRVTQVVNGQKGIYGVIPKRIFHPQLRAAMGVI
Sequences:
>Translated_438_residues MSVKHDKSHEAGATHDFHGGICGCCGPSATRGMSGAEVDLAVEQRGERLTRLDEVRGDDVDHLLSARSRRGFLKAGGLFG ALAAAAPVLSRARAEGTGGFSLFQQGGGRVHVVESTYETTKWGIFDSNLPDIVQIESGDVVSYPNTWSHFLNDLQPGMPI EEIARLRLAHPGVGPHSIIGPVGVRDAEPGDVLEIQYLRVRPTDWAVCFNNPGALGTGALPDAFPQGQAKYFDLDTANNT SEFAPGIQLRLAPFQGTMGVAPANGVFPTPPGHAYGVISSVPPGQHAGNVDCREAGEGSRLFVPVFQRGGKIFTGDSHAL QGDGEVTLTAMETAMKEIRVRVILHKQVALAWPMHETPDAWIVHGTNPDLDTAFRIALLNAIDFLEARAGLTRLDAYALC SLAVSFRVTQVVNGQKGIYGVIPKRIFHPQLRAAMGVI >Mature_437_residues SVKHDKSHEAGATHDFHGGICGCCGPSATRGMSGAEVDLAVEQRGERLTRLDEVRGDDVDHLLSARSRRGFLKAGGLFGA LAAAAPVLSRARAEGTGGFSLFQQGGGRVHVVESTYETTKWGIFDSNLPDIVQIESGDVVSYPNTWSHFLNDLQPGMPIE EIARLRLAHPGVGPHSIIGPVGVRDAEPGDVLEIQYLRVRPTDWAVCFNNPGALGTGALPDAFPQGQAKYFDLDTANNTS EFAPGIQLRLAPFQGTMGVAPANGVFPTPPGHAYGVISSVPPGQHAGNVDCREAGEGSRLFVPVFQRGGKIFTGDSHALQ GDGEVTLTAMETAMKEIRVRVILHKQVALAWPMHETPDAWIVHGTNPDLDTAFRIALLNAIDFLEARAGLTRLDAYALCS LAVSFRVTQVVNGQKGIYGVIPKRIFHPQLRAAMGVI
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46818; Mature: 46686
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKHDKSHEAGATHDFHGGICGCCGPSATRGMSGAEVDLAVEQRGERLTRLDEVRGDDV CCCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCEEEEHHHHHCHHHHHHHHHCCCCH DHLLSARSRRGFLKAGGLFGALAAAAPVLSRARAEGTGGFSLFQQGGGRVHVVESTYETT HHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCC KWGIFDSNLPDIVQIESGDVVSYPNTWSHFLNDLQPGMPIEEIARLRLAHPGVGPHSIIG CCCCCCCCCCCEEEECCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCCC PVGVRDAEPGDVLEIQYLRVRPTDWAVCFNNPGALGTGALPDAFPQGQAKYFDLDTANNT CCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCC SEFAPGIQLRLAPFQGTMGVAPANGVFPTPPGHAYGVISSVPPGQHAGNVDCREAGEGSR HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCE LFVPVFQRGGKIFTGDSHALQGDGEVTLTAMETAMKEIRVRVILHKQVALAWPMHETPDA EEEEHHHCCCEEEECCCCEECCCCCEEEHHHHHHHHHHHEEEEEEEHHHEECCCCCCCCC WIVHGTNPDLDTAFRIALLNAIDFLEARAGLTRLDAYALCSLAVSFRVTQVVNGQKGIYG EEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VIPKRIFHPQLRAAMGVI CCHHHHHCHHHHHHHCCC >Mature Secondary Structure SVKHDKSHEAGATHDFHGGICGCCGPSATRGMSGAEVDLAVEQRGERLTRLDEVRGDDV CCCCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCEEEEHHHHHCHHHHHHHHHCCCCH DHLLSARSRRGFLKAGGLFGALAAAAPVLSRARAEGTGGFSLFQQGGGRVHVVESTYETT HHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCC KWGIFDSNLPDIVQIESGDVVSYPNTWSHFLNDLQPGMPIEEIARLRLAHPGVGPHSIIG CCCCCCCCCCCEEEECCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCCC PVGVRDAEPGDVLEIQYLRVRPTDWAVCFNNPGALGTGALPDAFPQGQAKYFDLDTANNT CCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCC SEFAPGIQLRLAPFQGTMGVAPANGVFPTPPGHAYGVISSVPPGQHAGNVDCREAGEGSR HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCCE LFVPVFQRGGKIFTGDSHALQGDGEVTLTAMETAMKEIRVRVILHKQVALAWPMHETPDA EEEEHHHCCCEEEECCCCEECCCCCEEEHHHHHHHHHHHEEEEEEEHHHEECCCCCCCCC WIVHGTNPDLDTAFRIALLNAIDFLEARAGLTRLDAYALCSLAVSFRVTQVVNGQKGIYG EEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VIPKRIFHPQLRAAMGVI CCHHHHHCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA