Click here to switch to the map view.

The map label for this gene is nrfI [H]

Identifier: 220916858

GI number: 220916858

Start: 1959910

End: 1962156

Strand: Direct

Name: nrfI [H]

Synonym: A2cp1_1754

Alternate gene names: 220916858

Gene position: 1959910-1962156 (Clockwise)

Preceding gene: 220916857

Following gene: 220916859

Centisome position: 38.97

GC content: 71.52

Gene sequence:

>2247_bases
ATGCCGAAGCTCCTCGCCCTGCTGTCCTCCCTCAAGCTCGCCGTGATCCTGCTCGTGCTGCTGCTGCTCGGGCTGTCGGC
GGGCACGATCATCGAGTCGCGGTCCGGCGTCGAGGTGGCGGGTCGGCTCGTCTACTACGCGCCCTGGTTCCTGGCGCTCC
AGGCGCTGTTCACGGTGAACGTGGTCGCGTCGCTGGTCGCGCTGTTCCCGTACGGGAAGATGCGGATCGGCTACCTGCTC
ACCCATGGCTCGCTGGTGCTGATCCTGGTCGGCGCGCTCGTCACCTACTTCTTCAAGGTGGAGGGGACGCTCGGCCTGTG
GGAGGGCCAGACCGGCAACGAGATCGACCAGGTGGAGAACGGCCAGCTGGTGGCGCGACACACGCTGCCGTTCTCGGTCC
GGCTGATGGACTTCCAGATCGACCACTACCCGGGGACGATGCGCCCGGCGCAGTTCCGCAGCTACGTGGTCATCCTCGAT
GCGCAGACCGGGGCCGGCACGCCCGGCGCGCTCTGGATGAACCACCCGCTGGAGGTGGCGGGGTACACCATCTTCCAGTC
GAGCTACCAGCAGGAGAACGGGCGCGAGGCGTCGGTCTTCTCGGTGTCGAAGGACCCGGGCCAGCCCATCGTCTTCGCCG
GCTACGTGCTGCTGGTGCTGGGCATGTGCGTGGTGTTCGGCACGCGCATCGTGCAGCGCCGCCGCGCCGCCGCGCTGCTC
GCGAGCCTGGCCGTGCTCGCGCTGGCGCGCCCCGCCGCCGCCGAGGATCAGGTGACGAAGGCCGATCTGGAGGCGCTGCG
GCGCCTGCCGGTGCAGGCCGACGGGCGCCTCATGCCGCTCGACACGTGGGCGCGCGAGAACGTCTGGAAGATCACCGGCC
GGCGGCAGTGGCAGGGCCGCGACTCGGTGGTGGTCGCGGCGGGCTGGCTGGCGAACCCGCAGGCCGCCGCGAACGAGCCG
GTGATCGCGCTCGACGACGCGAAGCTCGCCGAGGCGATCGGGCTCCCCGGCGCCACGCACGCGGCGCTGGTGCAGGTGGC
GCGCAGCCCGCAGTTCGGGCAGCTCATGCGGCAGGCCTCCGAGCAGGAGGCGCACAACGAGCCGCGCCGCGGCGTCCTCG
CCGACGTCGAGAAGCTCTACGAGCGCGCCCAGCGCATGGGCGACCTCATCTCCGGCGGCGTGCGACCGGTGCCGGTGGGC
GGGCCCGCCGAGGCGCGCTGGAACCCGGCGCCGCAGCCGGGGCTTCCGGGCCTGCTCGAGGTGGCCCGCGGGCCGCGCCT
GGAGGGCTGGCCGTCGGCCGCCGCAATGGATCGCGAGGTCTCGTACAACGCCACGCGCCCGAGCCGCATCGCCTGGATCG
TGCTGGTGGGTGCGCTGGTGGCCGCGATCGCCGGCTGGCGCACGCGGAACCGCACGCTCGACGCGGCCGCGGCGGTGCTG
CTGGTGATCGGGTTCGGGGTGATGACCTGGGGCCTCGGCACCCGGTGGGCCGTCGGTGGCCGCGTGCCCGCGTCCAACAT
GTACGAGTCGATGCTGTTCCTGGCGTGGGGCGTGGGCCTGTTCGCGCTCGTCGCGCTCGTGTTCATCCGCAACCGGCTGG
TGCTGGTGAACGCGAGCGCCGGCGCCACGCTCACCATGCTGCTGGTGGACCTGCTGCCCATGGACGGCTTCATCCACCCG
ATGCCGCCGGTGCTCACCGGCACGCCCTGGCTCGCCATCCACGTGCCCATCATCATGGTGAGCTACGCGGTGCTGGCGCT
GGGGGTGATCATCGCGCACATGCAGATCGCGTTCGGCGCGCTGGCGCCCAGGCGCGAGGACCTCATCGAGAAGATGGCCG
ACCTGAACTACTGGTACACGATGGTCGGGTCGATCCTGCTCATCGCCGGCATCCTCACCGGCTCGATCTGGGCGGCGTCG
TCGTGGGGCCGGTACTGGGGCTGGGATCCGAAGGAGGTCTGGTCGCTGGTCGCCTTCCTCGCCTACATGGCCATCCTGCA
CGGCCGCTCCGACCGGCTCCTCGGCCGGTTCGGCGTGGCGGCCTGGAGCATCATCGCGTTCCAGACCATCCTCATGACGT
ACCTCGGCGTGAACTACGTCCTCGGGACCGGGCTCCACGCGTACGGCTTCGGCGACTCGCCCATCGTGATCTGGATGGTG
CTCATCGCGCTGGCCGAGATCGCGTTCCTGGCCTGGGGCGGGTTCGCCCAGCGCCGCGGCCAGGCGCGCACGCCGGCGGC
CGGGTAG

Upstream 100 bases:

>100_bases
TCCGGGACGCCCCTGGTGGTACCATGCCGCCGCTTTCCCCCGAAAGCGCCGCGCCGGCACACACCCCGGCCCGGAGCCCT
TCCGCTGCAGAGGTCGTTCG

Downstream 100 bases:

>100_bases
CGCGGGCCGCCGGGCAGCGTCCCCGGTCCCGACGCGCGATCGTCCACCCACACGCAGGAGGAGACAGCCGATGCCCACCA
CCGCGGAGAACCTCAAGGTC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 748; Mature: 747

Protein sequence:

>748_residues
MPKLLALLSSLKLAVILLVLLLLGLSAGTIIESRSGVEVAGRLVYYAPWFLALQALFTVNVVASLVALFPYGKMRIGYLL
THGSLVLILVGALVTYFFKVEGTLGLWEGQTGNEIDQVENGQLVARHTLPFSVRLMDFQIDHYPGTMRPAQFRSYVVILD
AQTGAGTPGALWMNHPLEVAGYTIFQSSYQQENGREASVFSVSKDPGQPIVFAGYVLLVLGMCVVFGTRIVQRRRAAALL
ASLAVLALARPAAAEDQVTKADLEALRRLPVQADGRLMPLDTWARENVWKITGRRQWQGRDSVVVAAGWLANPQAAANEP
VIALDDAKLAEAIGLPGATHAALVQVARSPQFGQLMRQASEQEAHNEPRRGVLADVEKLYERAQRMGDLISGGVRPVPVG
GPAEARWNPAPQPGLPGLLEVARGPRLEGWPSAAAMDREVSYNATRPSRIAWIVLVGALVAAIAGWRTRNRTLDAAAAVL
LVIGFGVMTWGLGTRWAVGGRVPASNMYESMLFLAWGVGLFALVALVFIRNRLVLVNASAGATLTMLLVDLLPMDGFIHP
MPPVLTGTPWLAIHVPIIMVSYAVLALGVIIAHMQIAFGALAPRREDLIEKMADLNYWYTMVGSILLIAGILTGSIWAAS
SWGRYWGWDPKEVWSLVAFLAYMAILHGRSDRLLGRFGVAAWSIIAFQTILMTYLGVNYVLGTGLHAYGFGDSPIVIWMV
LIALAEIAFLAWGGFAQRRGQARTPAAG

Sequences:

>Translated_748_residues
MPKLLALLSSLKLAVILLVLLLLGLSAGTIIESRSGVEVAGRLVYYAPWFLALQALFTVNVVASLVALFPYGKMRIGYLL
THGSLVLILVGALVTYFFKVEGTLGLWEGQTGNEIDQVENGQLVARHTLPFSVRLMDFQIDHYPGTMRPAQFRSYVVILD
AQTGAGTPGALWMNHPLEVAGYTIFQSSYQQENGREASVFSVSKDPGQPIVFAGYVLLVLGMCVVFGTRIVQRRRAAALL
ASLAVLALARPAAAEDQVTKADLEALRRLPVQADGRLMPLDTWARENVWKITGRRQWQGRDSVVVAAGWLANPQAAANEP
VIALDDAKLAEAIGLPGATHAALVQVARSPQFGQLMRQASEQEAHNEPRRGVLADVEKLYERAQRMGDLISGGVRPVPVG
GPAEARWNPAPQPGLPGLLEVARGPRLEGWPSAAAMDREVSYNATRPSRIAWIVLVGALVAAIAGWRTRNRTLDAAAAVL
LVIGFGVMTWGLGTRWAVGGRVPASNMYESMLFLAWGVGLFALVALVFIRNRLVLVNASAGATLTMLLVDLLPMDGFIHP
MPPVLTGTPWLAIHVPIIMVSYAVLALGVIIAHMQIAFGALAPRREDLIEKMADLNYWYTMVGSILLIAGILTGSIWAAS
SWGRYWGWDPKEVWSLVAFLAYMAILHGRSDRLLGRFGVAAWSIIAFQTILMTYLGVNYVLGTGLHAYGFGDSPIVIWMV
LIALAEIAFLAWGGFAQRRGQARTPAAG
>Mature_747_residues
PKLLALLSSLKLAVILLVLLLLGLSAGTIIESRSGVEVAGRLVYYAPWFLALQALFTVNVVASLVALFPYGKMRIGYLLT
HGSLVLILVGALVTYFFKVEGTLGLWEGQTGNEIDQVENGQLVARHTLPFSVRLMDFQIDHYPGTMRPAQFRSYVVILDA
QTGAGTPGALWMNHPLEVAGYTIFQSSYQQENGREASVFSVSKDPGQPIVFAGYVLLVLGMCVVFGTRIVQRRRAAALLA
SLAVLALARPAAAEDQVTKADLEALRRLPVQADGRLMPLDTWARENVWKITGRRQWQGRDSVVVAAGWLANPQAAANEPV
IALDDAKLAEAIGLPGATHAALVQVARSPQFGQLMRQASEQEAHNEPRRGVLADVEKLYERAQRMGDLISGGVRPVPVGG
PAEARWNPAPQPGLPGLLEVARGPRLEGWPSAAAMDREVSYNATRPSRIAWIVLVGALVAAIAGWRTRNRTLDAAAAVLL
VIGFGVMTWGLGTRWAVGGRVPASNMYESMLFLAWGVGLFALVALVFIRNRLVLVNASAGATLTMLLVDLLPMDGFIHPM
PPVLTGTPWLAIHVPIIMVSYAVLALGVIIAHMQIAFGALAPRREDLIEKMADLNYWYTMVGSILLIAGILTGSIWAASS
WGRYWGWDPKEVWSLVAFLAYMAILHGRSDRLLGRFGVAAWSIIAFQTILMTYLGVNYVLGTGLHAYGFGDSPIVIWMVL
IALAEIAFLAWGGFAQRRGQARTPAAG

Specific function: May play a role in cytochrome c biogenesis and may be required for maturation of the NrfA protein [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR007816 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm; PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 81013; Mature: 80882

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLLALLSSLKLAVILLVLLLLGLSAGTIIESRSGVEVAGRLVYYAPWFLALQALFTVN
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVASLVALFPYGKMRIGYLLTHGSLVLILVGALVTYFFKVEGTLGLWEGQTGNEIDQVEN
HHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHCCC
GQLVARHTLPFSVRLMDFQIDHYPGTMRPAQFRSYVVILDAQTGAGTPGALWMNHPLEVA
CCEEEEECCCEEEEEEEEEEECCCCCCCCHHHCCEEEEEECCCCCCCCCCEEECCCHHHH
GYTIFQSSYQQENGREASVFSVSKDPGQPIVFAGYVLLVLGMCVVFGTRIVQRRRAAALL
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLAVLALARPAAAEDQVTKADLEALRRLPVQADGRLMPLDTWARENVWKITGRRQWQGR
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHCCCEEEECCCCCCCCC
DSVVVAAGWLANPQAAANEPVIALDDAKLAEAIGLPGATHAALVQVARSPQFGQLMRQAS
CCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
EQEAHNEPRRGVLADVEKLYERAQRMGDLISGGVRPVPVGGPAEARWNPAPQPGLPGLLE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHHH
VARGPRLEGWPSAAAMDREVSYNATRPSRIAWIVLVGALVAAIAGWRTRNRTLDAAAAVL
HHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LVIGFGVMTWGLGTRWAVGGRVPASNMYESMLFLAWGVGLFALVALVFIRNRLVLVNASA
HHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
GATLTMLLVDLLPMDGFIHPMPPVLTGTPWLAIHVPIIMVSYAVLALGVIIAHMQIAFGA
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPRREDLIEKMADLNYWYTMVGSILLIAGILTGSIWAASSWGRYWGWDPKEVWSLVAFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
AYMAILHGRSDRLLGRFGVAAWSIIAFQTILMTYLGVNYVLGTGLHAYGFGDSPIVIWMV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH
LIALAEIAFLAWGGFAQRRGQARTPAAG
HHHHHHHHHHHHCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
PKLLALLSSLKLAVILLVLLLLGLSAGTIIESRSGVEVAGRLVYYAPWFLALQALFTVN
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVASLVALFPYGKMRIGYLLTHGSLVLILVGALVTYFFKVEGTLGLWEGQTGNEIDQVEN
HHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHCCC
GQLVARHTLPFSVRLMDFQIDHYPGTMRPAQFRSYVVILDAQTGAGTPGALWMNHPLEVA
CCEEEEECCCEEEEEEEEEEECCCCCCCCHHHCCEEEEEECCCCCCCCCCEEECCCHHHH
GYTIFQSSYQQENGREASVFSVSKDPGQPIVFAGYVLLVLGMCVVFGTRIVQRRRAAALL
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLAVLALARPAAAEDQVTKADLEALRRLPVQADGRLMPLDTWARENVWKITGRRQWQGR
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHCCCEEEECCCCCCCCC
DSVVVAAGWLANPQAAANEPVIALDDAKLAEAIGLPGATHAALVQVARSPQFGQLMRQAS
CCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
EQEAHNEPRRGVLADVEKLYERAQRMGDLISGGVRPVPVGGPAEARWNPAPQPGLPGLLE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHHH
VARGPRLEGWPSAAAMDREVSYNATRPSRIAWIVLVGALVAAIAGWRTRNRTLDAAAAVL
HHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LVIGFGVMTWGLGTRWAVGGRVPASNMYESMLFLAWGVGLFALVALVFIRNRLVLVNASA
HHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
GATLTMLLVDLLPMDGFIHPMPPVLTGTPWLAIHVPIIMVSYAVLALGVIIAHMQIAFGA
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPRREDLIEKMADLNYWYTMVGSILLIAGILTGSIWAASSWGRYWGWDPKEVWSLVAFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
AYMAILHGRSDRLLGRFGVAAWSIIAFQTILMTYLGVNYVLGTGLHAYGFGDSPIVIWMV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH
LIALAEIAFLAWGGFAQRRGQARTPAAG
HHHHHHHHHHHHCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]